Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612769
Identifier: 120612769
GI number: 120612769
Start: 4583641
End: 4584105
Strand: Direct
Name: 120612769
Synonym: Aave_4132
Alternate gene names: NA
Gene position: 4583641-4584105 (Clockwise)
Preceding gene: 120612768
Following gene: 120612770
Centisome position: 85.63
GC content: 68.6
Gene sequence:
>465_bases ATGGCACGAACCTTCGCGACCCACACGAACCGGCCCGTCGTGGAGGCCCAGCGCAAGCGCGACCTGGGCCTCATCCACCA GGGCAAGTCGGCCCTGCATTGGTCCGACGACGACTACCGCTATCACCTCAAGCAGCTCACGGGCAAGACCAGCGCAGCGG ACCTGGATCACGGCGCGCGGCGGAAGGTGCTGGCGCACATGGAGACGCTCGGCTTCAAGCCCAAAAGCACGTTCAAGCCT TTCGACCAGGCCGCGAAGATTCGGTGGCTCTGGCGCAAGCTCGGCGAGGCCGGCGGCGTGCGCGATGCCAGCGACGCGGC GCTGCTGGCGTTCGTGGGGCGCACCGCGGGCATGGGCGTCGCTGATTTGAAGTTCCTGCCGGTCGCGCAGGCGTCCACGG TGATCGAAGCGCTCAAGGCCTGGCTGGACCGCGCCAAGCGCGCACAGGGAGCCCCCCGTGTCTGA
Upstream 100 bases:
>100_bases CACCGCTTCGACGTCAACCGCCACCACTGCCCGTCCTGCCACCTGGCGCACAGCGACGCGTCCGGGCAGCGCAGCCTGTT CACCTCACTCGTTTAATGCC
Downstream 100 bases:
>100_bases GGTGGTCGACATCTTTTTCCGCTGGACCGGCATCACGTTCTGGTGCATGGCGGTGGGCCTGCCTTCGTTGGCGTTTCTCC ACGCGCTTGCCGACCTGGTC
Product: hypothetical protein
Products: NA
Alternate protein names: Prophage Regulatory Protein
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MARTFATHTNRPVVEAQRKRDLGLIHQGKSALHWSDDDYRYHLKQLTGKTSAADLDHGARRKVLAHMETLGFKPKSTFKP FDQAAKIRWLWRKLGEAGGVRDASDAALLAFVGRTAGMGVADLKFLPVAQASTVIEALKAWLDRAKRAQGAPRV
Sequences:
>Translated_154_residues MARTFATHTNRPVVEAQRKRDLGLIHQGKSALHWSDDDYRYHLKQLTGKTSAADLDHGARRKVLAHMETLGFKPKSTFKP FDQAAKIRWLWRKLGEAGGVRDASDAALLAFVGRTAGMGVADLKFLPVAQASTVIEALKAWLDRAKRAQGAPRV >Mature_153_residues ARTFATHTNRPVVEAQRKRDLGLIHQGKSALHWSDDDYRYHLKQLTGKTSAADLDHGARRKVLAHMETLGFKPKSTFKPF DQAAKIRWLWRKLGEAGGVRDASDAALLAFVGRTAGMGVADLKFLPVAQASTVIEALKAWLDRAKRAQGAPRV
Specific function: Unknown
COG id: COG4382
COG function: function code S; Mu-like prophage protein gp16
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17058; Mature: 16927
Theoretical pI: Translated: 11.10; Mature: 11.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARTFATHTNRPVVEAQRKRDLGLIHQGKSALHWSDDDYRYHLKQLTGKTSAADLDHGAR CCCCCCCCCCCCHHHHHHHCCCCHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHH RKVLAHMETLGFKPKSTFKPFDQAAKIRWLWRKLGEAGGVRDASDAALLAFVGRTAGMGV HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCC ADLKFLPVAQASTVIEALKAWLDRAKRAQGAPRV HHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure ARTFATHTNRPVVEAQRKRDLGLIHQGKSALHWSDDDYRYHLKQLTGKTSAADLDHGAR CCCCCCCCCCCHHHHHHHCCCCHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHH RKVLAHMETLGFKPKSTFKPFDQAAKIRWLWRKLGEAGGVRDASDAALLAFVGRTAGMGV HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCC ADLKFLPVAQASTVIEALKAWLDRAKRAQGAPRV HHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA