Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612700
Identifier: 120612700
GI number: 120612700
Start: 4514918
End: 4516324
Strand: Direct
Name: 120612700
Synonym: Aave_4063
Alternate gene names: NA
Gene position: 4514918-4516324 (Clockwise)
Preceding gene: 120612699
Following gene: 120612701
Centisome position: 84.35
GC content: 62.97
Gene sequence:
>1407_bases ATGCCTGAGAACTACCCAGCCCGGACGCTCGCCGGCGCACCGGCTCCCAGCCCGGCCTCCGGCGGGCGCCCTTTCGCGGC GATCCTCGCATTGCTGACGGTGTACTACGCCGTCTGGCTGCTGATATTCTGGCCTGGCGTCCTCGGCGAAGACAGCCTGG GGATCCTGCTGGAAGTCCAGGATCCGGTGAACATGAGGTCCGGGAAACCCGTCTTCTGGTACTACTTCGTCAAGATCTTC TACGAGCCCGGCCACAGGGTGGAAGTGCCCATCGCGGTGCTCACGCTGATATGCGCCGTGGTTTTCTCGCGCATCCTGGC CTGGTCCTGGGCCCAGGGTTTCCGGAAGACCACCGCCTTTCTGCTCGTCTTCGTGGCGCTGGCGCCGCATACCGTCTTCT TCATCGAGACGCTCTATCCGGATGGCATCTACTCCGTCGCGGTGGCGGGCCTGACCTTCGAAATCTGGCTCAGCGCCCGG CACCGCAGACTGAGCAAGGCCTCCCTGGCCATGATCGCGCTGACCCTGCCGTTCGCGGCATTCGCAAGGCCCAACGGCAT CATCTTCCTGGTGCCGGTCGGGATGCTGGTGCTGATGGTGGACAAGGGCCGGCGCCGCTGGCTGGGCGCCATCGTCCTCG CGTGGTGCACATTGATGGTCGGCGCCTCCCAGGCGCACAAGTCCGCAGGACACGGGGTGCTCTATCCCCTGGCGATCTAC GAAACCGTCAACTTCCTGCAACCCCGTCCCATGAATCTCTGGATCTCGCAACCGCGGGTGTTGCCCGGCACGGTCGAAAT CCTCGAGAAATACAAGCCGCTGCAGACCTACCTGGATTACTACGATCCCGACTACTGGGATCCGCTGCAGTTCGCGGAGA AGGGTCCCAGGGTGTCCGGAATGGCCAAAGCCGACCGCGACGCGGTGGTGAAAGACTTCTTCCGGTACAACCTGTGGCAG AACGTGCCCAAGTTCCTGGGAAGCCGCGTCAACATCTTCTTCGTCTCCGCCTTTGCAATGGGCGGAATGCCCGGGCACGT GTATGCACAGATCGTCCTGAGGCAGCTCGACACCGAGTCCACCTACCGGCTCTTCCAGTTGTCGGAAGCCGAGAAGGTGG CAACGGACATCTACGAATTCAGCTGGCGCTGGCGCTGGCTGCTATGGACGCCGTTCCTCGGCATCGCGCTGGTGATCTAT GCGTTGCTCAAGGGAATCCGGCGCCGCGACGGTCCCCTGCTGATCACATCGATCCCCATGGTCGTCCAGCTGGGAGCGAT CTTCATCTTCTCCATTGCGGGAGAATACCGGTACCTGCTTCCGTTCTTCATGATCGCCCTGCCCCTCCTGCCCATGCTCC TGGCACAACGGCTTCCACGGAGCGGCGGGAAGGCGTGCAGTGCGTGA
Upstream 100 bases:
>100_bases CTGTGCACCAGCCCCTACGACGTTCGGCTGGCGCAGGAGAGGTTCCCCAAGATCCACTTCCACCCGCTGCGCGAGCATGC GGGACTTGCCCTGCAAACCA
Downstream 100 bases:
>100_bases GAGCCACCTGGCGGCCACGCACGCCTCCACGCCCGGCACGGAATGCCCCGGGGCAGGCGATCGAAGGCCGCTTCTCTCGA ACGATCCTCTTTTTCCACCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 468; Mature: 467
Protein sequence:
>468_residues MPENYPARTLAGAPAPSPASGGRPFAAILALLTVYYAVWLLIFWPGVLGEDSLGILLEVQDPVNMRSGKPVFWYYFVKIF YEPGHRVEVPIAVLTLICAVVFSRILAWSWAQGFRKTTAFLLVFVALAPHTVFFIETLYPDGIYSVAVAGLTFEIWLSAR HRRLSKASLAMIALTLPFAAFARPNGIIFLVPVGMLVLMVDKGRRRWLGAIVLAWCTLMVGASQAHKSAGHGVLYPLAIY ETVNFLQPRPMNLWISQPRVLPGTVEILEKYKPLQTYLDYYDPDYWDPLQFAEKGPRVSGMAKADRDAVVKDFFRYNLWQ NVPKFLGSRVNIFFVSAFAMGGMPGHVYAQIVLRQLDTESTYRLFQLSEAEKVATDIYEFSWRWRWLLWTPFLGIALVIY ALLKGIRRRDGPLLITSIPMVVQLGAIFIFSIAGEYRYLLPFFMIALPLLPMLLAQRLPRSGGKACSA
Sequences:
>Translated_468_residues MPENYPARTLAGAPAPSPASGGRPFAAILALLTVYYAVWLLIFWPGVLGEDSLGILLEVQDPVNMRSGKPVFWYYFVKIF YEPGHRVEVPIAVLTLICAVVFSRILAWSWAQGFRKTTAFLLVFVALAPHTVFFIETLYPDGIYSVAVAGLTFEIWLSAR HRRLSKASLAMIALTLPFAAFARPNGIIFLVPVGMLVLMVDKGRRRWLGAIVLAWCTLMVGASQAHKSAGHGVLYPLAIY ETVNFLQPRPMNLWISQPRVLPGTVEILEKYKPLQTYLDYYDPDYWDPLQFAEKGPRVSGMAKADRDAVVKDFFRYNLWQ NVPKFLGSRVNIFFVSAFAMGGMPGHVYAQIVLRQLDTESTYRLFQLSEAEKVATDIYEFSWRWRWLLWTPFLGIALVIY ALLKGIRRRDGPLLITSIPMVVQLGAIFIFSIAGEYRYLLPFFMIALPLLPMLLAQRLPRSGGKACSA >Mature_467_residues PENYPARTLAGAPAPSPASGGRPFAAILALLTVYYAVWLLIFWPGVLGEDSLGILLEVQDPVNMRSGKPVFWYYFVKIFY EPGHRVEVPIAVLTLICAVVFSRILAWSWAQGFRKTTAFLLVFVALAPHTVFFIETLYPDGIYSVAVAGLTFEIWLSARH RRLSKASLAMIALTLPFAAFARPNGIIFLVPVGMLVLMVDKGRRRWLGAIVLAWCTLMVGASQAHKSAGHGVLYPLAIYE TVNFLQPRPMNLWISQPRVLPGTVEILEKYKPLQTYLDYYDPDYWDPLQFAEKGPRVSGMAKADRDAVVKDFFRYNLWQN VPKFLGSRVNIFFVSAFAMGGMPGHVYAQIVLRQLDTESTYRLFQLSEAEKVATDIYEFSWRWRWLLWTPFLGIALVIYA LLKGIRRRDGPLLITSIPMVVQLGAIFIFSIAGEYRYLLPFFMIALPLLPMLLAQRLPRSGGKACSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52775; Mature: 52644
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPENYPARTLAGAPAPSPASGGRPFAAILALLTVYYAVWLLIFWPGVLGEDSLGILLEVQ CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEC DPVNMRSGKPVFWYYFVKIFYEPGHRVEVPIAVLTLICAVVFSRILAWSWAQGFRKTTAF CCCCCCCCCCCHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLVFVALAPHTVFFIETLYPDGIYSVAVAGLTFEIWLSARHRRLSKASLAMIALTLPFAA HHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FARPNGIIFLVPVGMLVLMVDKGRRRWLGAIVLAWCTLMVGASQAHKSAGHGVLYPLAIY HCCCCCEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHCCCCCEEEHHHHH ETVNFLQPRPMNLWISQPRVLPGTVEILEKYKPLQTYLDYYDPDYWDPLQFAEKGPRVSG HHHHHCCCCCCEEEECCCCCCCHHHHHHHHHCHHHHHHHHCCCCCCCHHHHHHCCCCCCC MAKADRDAVVKDFFRYNLWQNVPKFLGSRVNIFFVSAFAMGGMPGHVYAQIVLRQLDTES CCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEHHHHCCCCHHHHHHHHHHHHCCCH TYRLFQLSEAEKVATDIYEFSWRWRWLLWTPFLGIALVIYALLKGIRRRDGPLLITSIPM HHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHH VVQLGAIFIFSIAGEYRYLLPFFMIALPLLPMLLAQRLPRSGGKACSA HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure PENYPARTLAGAPAPSPASGGRPFAAILALLTVYYAVWLLIFWPGVLGEDSLGILLEVQ CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEC DPVNMRSGKPVFWYYFVKIFYEPGHRVEVPIAVLTLICAVVFSRILAWSWAQGFRKTTAF CCCCCCCCCCCHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLVFVALAPHTVFFIETLYPDGIYSVAVAGLTFEIWLSARHRRLSKASLAMIALTLPFAA HHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FARPNGIIFLVPVGMLVLMVDKGRRRWLGAIVLAWCTLMVGASQAHKSAGHGVLYPLAIY HCCCCCEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHCCCCCEEEHHHHH ETVNFLQPRPMNLWISQPRVLPGTVEILEKYKPLQTYLDYYDPDYWDPLQFAEKGPRVSG HHHHHCCCCCCEEEECCCCCCCHHHHHHHHHCHHHHHHHHCCCCCCCHHHHHHCCCCCCC MAKADRDAVVKDFFRYNLWQNVPKFLGSRVNIFFVSAFAMGGMPGHVYAQIVLRQLDTES CCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEHHHHCCCCHHHHHHHHHHHHCCCH TYRLFQLSEAEKVATDIYEFSWRWRWLLWTPFLGIALVIYALLKGIRRRDGPLLITSIPM HHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHH VVQLGAIFIFSIAGEYRYLLPFFMIALPLLPMLLAQRLPRSGGKACSA HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA