Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612701
Identifier: 120612701
GI number: 120612701
Start: 4516367
End: 4516789
Strand: Direct
Name: 120612701
Synonym: Aave_4064
Alternate gene names: NA
Gene position: 4516367-4516789 (Clockwise)
Preceding gene: 120612700
Following gene: 120612702
Centisome position: 84.37
GC content: 65.72
Gene sequence:
>423_bases ATGCCCCGGGGCAGGCGATCGAAGGCCGCTTCTCTCGAACGATCCTCTTTTTCCACCATCTGTCGCCCCATGTCGCTGCT ACTCACCCTCCTGACGCTTCTGTGCGTGTTCGGCATTTCCGTCGGGCAGCTTCTCTTCAAGAAGGCGGCGATGCTCCTGC CGCCCCAGCCGGCCTTGACCGACTGGCTTTTCAATGGCTGGCTGATCGTGGCGCTGGCGCTGTACGGTGTGACCACCCTG CTCTGGATCTGGGTGCTGCGCAGCGCGCCGCTGCACCTGGCCTACCCCTTCATGGGGCTCGCCTTCCTGCTCGTCCCCAC CATGGGCTGGCTGTTCCTCGGCGAACCGCTGCACCTGCAGACGTTCGTCGGCGGCGCATTGATTCTCGCCGGCATCGCCG TGGCCGGGAGGGCCGGGGCATGA
Upstream 100 bases:
>100_bases GCCCATGCTCCTGGCACAACGGCTTCCACGGAGCGGCGGGAAGGCGTGCAGTGCGTGAGAGCCACCTGGCGGCCACGCAC GCCTCCACGCCCGGCACGGA
Downstream 100 bases:
>100_bases CGCAGGCACGCAGCACGATGTCCATCGCGGTGGCGATTCCCTGCTACAAGGTGACCCAGCACGTGCTGGAGGTGATCCGC GCGGTACCGGCGTCGGTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 140; Mature: 139
Protein sequence:
>140_residues MPRGRRSKAASLERSSFSTICRPMSLLLTLLTLLCVFGISVGQLLFKKAAMLLPPQPALTDWLFNGWLIVALALYGVTTL LWIWVLRSAPLHLAYPFMGLAFLLVPTMGWLFLGEPLHLQTFVGGALILAGIAVAGRAGA
Sequences:
>Translated_140_residues MPRGRRSKAASLERSSFSTICRPMSLLLTLLTLLCVFGISVGQLLFKKAAMLLPPQPALTDWLFNGWLIVALALYGVTTL LWIWVLRSAPLHLAYPFMGLAFLLVPTMGWLFLGEPLHLQTFVGGALILAGIAVAGRAGA >Mature_139_residues PRGRRSKAASLERSSFSTICRPMSLLLTLLTLLCVFGISVGQLLFKKAAMLLPPQPALTDWLFNGWLIVALALYGVTTLL WIWVLRSAPLHLAYPFMGLAFLLVPTMGWLFLGEPLHLQTFVGGALILAGIAVAGRAGA
Specific function: Unknown
COG id: COG2076
COG function: function code P; Membrane transporters of cations and cationic drugs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15178; Mature: 15046
Theoretical pI: Translated: 11.07; Mature: 11.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRGRRSKAASLERSSFSTICRPMSLLLTLLTLLCVFGISVGQLLFKKAAMLLPPQPALT CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH DWLFNGWLIVALALYGVTTLLWIWVLRSAPLHLAYPFMGLAFLLVPTMGWLFLGEPLHLQ HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH TFVGGALILAGIAVAGRAGA HHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure PRGRRSKAASLERSSFSTICRPMSLLLTLLTLLCVFGISVGQLLFKKAAMLLPPQPALT CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH DWLFNGWLIVALALYGVTTLLWIWVLRSAPLHLAYPFMGLAFLLVPTMGWLFLGEPLHLQ HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH TFVGGALILAGIAVAGRAGA HHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA