Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612668
Identifier: 120612668
GI number: 120612668
Start: 4479736
End: 4480611
Strand: Direct
Name: 120612668
Synonym: Aave_4031
Alternate gene names: NA
Gene position: 4479736-4480611 (Clockwise)
Preceding gene: 120612667
Following gene: 120612669
Centisome position: 83.69
GC content: 71.0
Gene sequence:
>876_bases ATGAGCACTTCGACCTCCTCCTTCCGTTCCGATGCGGACGGTACTTCCGTCGCGACGTATTCCTGGACCGACGTGTCCGG CGAACCCGCGGGCGTGGTGCAGATCGCCCACGGGCTCGCCGAGCACGGCGAGCGCTACGACCGCTTCGCCAGGGCGCTGA ACGCCGCCGGGTTCCTGGTTCACGCGGTGGACCACCGCGGCCATGGGCGCACCGCGGGCGGACGCATGGGAGACTTCGGC GCGGCCGGCTTCGACGGCCTGATCGCCGACGTGGCCCAGTTCGGCGCCCTGCTGCGGGCCCGGCACGGGAATCTTCCACT CTTCCTCTTCGCGCACTCGATGGGCTCCTTCGCCGCGCAGGCCGCCCTCCTCGACCACTCGGGGACGTGGTCGGGCGTAG TCCTGTCCGGTTCGACCGCGCTGGACCTGTTCGCCGCCGACCTGGCGAATCCGCCGCCAGGCGCTCCTGCCGGCCTGGCG GCACTCAACGCCGGCTTCGTGTACCGCACGGGCTACGAATGGCTGTCGCGCGACGCTGCCGAGGTGGATGCCTACGTTGC CGACCCGTGGTGCGGATGGGACGTTCCCCCCGACGTGTTCCCGGCCTTGATGGCGCCCGCCGCCCGCCTCGCCGATCCGG CCCGGCTGTCGGGCATCCGCAGCGACCTGCCCATCCTCATCGCTTCAGGCGACGCGGATCCGCTCGCTGCCGGAGGCGAG CGGCTGCGGATCCTGGGCCAGCGCTACCACGACGCGGGCATCGCCGACGTGACCGTCAGGCTTTACCCAGCCGGCCGCCA TGAAATCCTCAACGAGACCAACCTTGGCGAAGTGACTGCCGACATCGTGGCCTGGCTGCGCGCGCACGCGGCATGA
Upstream 100 bases:
>100_bases TGCTGGCGGAGTGCGAGCGCGCGCTGCGGCGGCTGAAGGAGGGGCCGGAGGTGCGCAAGGGCGGGTTCCGCCAGGCCGGA GACGGTGTGAGAATCGAACG
Downstream 100 bases:
>100_bases CGCGGCCGCCTGCCGGTCAGAAAACGCCGTACCGGTAGGCGAAGTACAGCGCGGCCAGCACGCCGATCACGGAGAGCGCG GTCATCAGTCTGGGCATCGA
Product: putative lysophospholipase L2
Products: NA
Alternate protein names: Alpha/Beta Hydrolase Fold; Alpha/Beta Hydrolase Fold Protein; Alpha/Beta Fold Family Hydrolase; Hydrolase Alpha/Beta Fold Family; Lipase; Hydrolase; Alpha/Beta Hydrolase; Acylglycerol Lipase; Lysophospholipase Protein; Hydrolase Alpha/Beta Fold Family Protein; Hydrolase Alpha/Beta Hydrolase Fold Family; Carboxylic Ester Hydrolase; Alpha/Beta Hydrolase Fold-Domain Containing Protein; Monoacylglycerol Lipase; Alpha/Beta Hydrolase Fold Family; Monoglyceride Lipase; S33 Family Lysophospholipase; Alpha/Beta Fold Family Protein Hydrolase; Hydrolase Alpha/Beta Domain-Containing Protein; Lysophospholipase/Monoglyceride Lipase
Number of amino acids: Translated: 291; Mature: 290
Protein sequence:
>291_residues MSTSTSSFRSDADGTSVATYSWTDVSGEPAGVVQIAHGLAEHGERYDRFARALNAAGFLVHAVDHRGHGRTAGGRMGDFG AAGFDGLIADVAQFGALLRARHGNLPLFLFAHSMGSFAAQAALLDHSGTWSGVVLSGSTALDLFAADLANPPPGAPAGLA ALNAGFVYRTGYEWLSRDAAEVDAYVADPWCGWDVPPDVFPALMAPAARLADPARLSGIRSDLPILIASGDADPLAAGGE RLRILGQRYHDAGIADVTVRLYPAGRHEILNETNLGEVTADIVAWLRAHAA
Sequences:
>Translated_291_residues MSTSTSSFRSDADGTSVATYSWTDVSGEPAGVVQIAHGLAEHGERYDRFARALNAAGFLVHAVDHRGHGRTAGGRMGDFG AAGFDGLIADVAQFGALLRARHGNLPLFLFAHSMGSFAAQAALLDHSGTWSGVVLSGSTALDLFAADLANPPPGAPAGLA ALNAGFVYRTGYEWLSRDAAEVDAYVADPWCGWDVPPDVFPALMAPAARLADPARLSGIRSDLPILIASGDADPLAAGGE RLRILGQRYHDAGIADVTVRLYPAGRHEILNETNLGEVTADIVAWLRAHAA >Mature_290_residues STSTSSFRSDADGTSVATYSWTDVSGEPAGVVQIAHGLAEHGERYDRFARALNAAGFLVHAVDHRGHGRTAGGRMGDFGA AGFDGLIADVAQFGALLRARHGNLPLFLFAHSMGSFAAQAALLDHSGTWSGVVLSGSTALDLFAADLANPPPGAPAGLAA LNAGFVYRTGYEWLSRDAAEVDAYVADPWCGWDVPPDVFPALMAPAARLADPARLSGIRSDLPILIASGDADPLAAGGER LRILGQRYHDAGIADVTVRLYPAGRHEILNETNLGEVTADIVAWLRAHAA
Specific function: Unknown
COG id: COG2267
COG function: function code I; Lysophospholipase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI51242953, Length=286, Percent_Identity=28.6713286713287, Blast_Score=82, Evalue=5e-16, Organism=Homo sapiens, GI6005786, Length=284, Percent_Identity=28.169014084507, Blast_Score=82, Evalue=6e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30395; Mature: 30264
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTSTSSFRSDADGTSVATYSWTDVSGEPAGVVQIAHGLAEHGERYDRFARALNAAGFLV CCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE HAVDHRGHGRTAGGRMGDFGAAGFDGLIADVAQFGALLRARHGNLPLFLFAHSMGSFAAQ EEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHH AALLDHSGTWSGVVLSGSTALDLFAADLANPPPGAPAGLAALNAGFVYRTGYEWLSRDAA HHHHCCCCCCCEEEEECCHHHHHHHHHHCCCCCCCCHHHHHHCCCEEEECCHHHHCCCHH EVDAYVADPWCGWDVPPDVFPALMAPAARLADPARLSGIRSDLPILIASGDADPLAAGGE HHCEEECCCCCCCCCCHHHHHHHHCCHHHHCCHHHHHCCCCCCCEEEECCCCCCCCCCCH RLRILGQRYHDAGIADVTVRLYPAGRHEILNETNLGEVTADIVAWLRAHAA HHHHHHHHHCCCCCEEEEEEEEECCHHHHHCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure STSTSSFRSDADGTSVATYSWTDVSGEPAGVVQIAHGLAEHGERYDRFARALNAAGFLV CCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE HAVDHRGHGRTAGGRMGDFGAAGFDGLIADVAQFGALLRARHGNLPLFLFAHSMGSFAAQ EEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHH AALLDHSGTWSGVVLSGSTALDLFAADLANPPPGAPAGLAALNAGFVYRTGYEWLSRDAA HHHHCCCCCCCEEEEECCHHHHHHHHHHCCCCCCCCHHHHHHCCCEEEECCHHHHCCCHH EVDAYVADPWCGWDVPPDVFPALMAPAARLADPARLSGIRSDLPILIASGDADPLAAGGE HHCEEECCCCCCCCCCHHHHHHHHCCHHHHCCHHHHHCCCCCCCEEEECCCCCCCCCCCH RLRILGQRYHDAGIADVTVRLYPAGRHEILNETNLGEVTADIVAWLRAHAA HHHHHHHHHCCCCCEEEEEEEEECCHHHHHCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA