Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612669
Identifier: 120612669
GI number: 120612669
Start: 4480803
End: 4481990
Strand: Direct
Name: 120612669
Synonym: Aave_4032
Alternate gene names: NA
Gene position: 4480803-4481990 (Clockwise)
Preceding gene: 120612668
Following gene: 120612672
Centisome position: 83.71
GC content: 71.55
Gene sequence:
>1188_bases ATGATCGCCTACCACCGCACGGCACTGGCGCAGCAGCTGGTGCAGGCCCTGCAGGGGCGCCTGCTGCTCGGCGATGCACA CAATGGCCTGTTCCTGGCCGCGCCCCGCCGCACCGGCAAGAGCACGTTCCTGCAGGGCGACCTTGCCCCCGCCCTGCGAC AGGCAGGTGTCGTAGTGGTGTACGTGGACCTGTGGGCCGACATCCGCCGCGACCCCGGCCCCCTGATCGCCGAGGCCATC GCCCAGTCCCTGCAGGCGCACCTGGGACTGGTGGCCCGCACCGCGAAGAAGGCGGGCGTCAAGGGCGTGAAGGTGGCGGG CGCTCTGGACATCGACACCAGCCGGATCGGCCAGGTCGATGGCCTGACGCTGGTGGACGCGCTGCGCAACCTGCAGCAGG CGGCGGGCCGGCCCGTGGCGCTGATCATCGACGAAGCCCAGCATGCCCTCACCAGCGAGGCGGGCGAAGCGGCGATGACG GCCCTGAAATCCGCGCGGGACCAGATGAACCGGCCCGGCCAGGTGAGCCTGATGCTGGTGATGTCGGGCTCCGACCGCGA CAAGCTGCTGCGCCTGGTGGTCAGCGCGGGCGCGCCCTTCTACGGATCGCAGATCCAGGCACTGCCGCCGCTGGACACCG ATTTCATCGCCCACGTGGCCGGGCTGGTGGAAGCCCAGCGGCCGGACCTCGTACCGGTGGATCGGGCCGCGCTGCAGGCG GCGTTCGCCGCCTTCGGCCACCGGCCCCAGTTCTTCATGGCGGCGATGGGAGCCGTGCTCAGCCCCCTGTCGGGCCACAG CGGCCGCTTCGAGCCCGCGCTGCAGCAGGCCGCACACGACCAGCAGGCGCGGGACGAAGCGCAGATGGAATCCGACTACC TGGGCCTCAAGCCGACCGAGCAGGTGGTGCTGTGGCGCATGCTGGCCCAGGGCCCGCGCTTTCGCCCCTACGACGCCGAA GCCCTGCGCTTCTACCGAGACAAGCTGGACCGGCCGGTGAGCGTGCAGCAGGCGCAGAAGGCGCTGGAATCGCTGCGGCA ACGCACACCGGCCCTGGTGTGGAAATCGGCACGCGGCGAGTACGCGGTCGAGGATGCGGCCATGCACCGGTGGTTCGAAG CGCGCCTCGCCGCAGGCATGTGGCCGCCCGGCCAGCGGCAGGGCAGCACGCCGCTGGCGAGCGGCTGA
Upstream 100 bases:
>100_bases GGGCATCGAAACTCCTTGGGAAATAGCTACCCGGGCAATTTACCCTCTTTTATCCAGGAAAAGATAAAATATCTTCCCAC GGATAAAACAAGGTAATCGC
Downstream 100 bases:
>100_bases AAATCCAGCCGCCGCACGGGAGCACAGCCCCGCTCACGCCCCGGATGCGCCCGCGTCCTGGGCGAACCACCGCCCTCCCT CGCGCCGCTCCAGCCCCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 395; Mature: 395
Protein sequence:
>395_residues MIAYHRTALAQQLVQALQGRLLLGDAHNGLFLAAPRRTGKSTFLQGDLAPALRQAGVVVVYVDLWADIRRDPGPLIAEAI AQSLQAHLGLVARTAKKAGVKGVKVAGALDIDTSRIGQVDGLTLVDALRNLQQAAGRPVALIIDEAQHALTSEAGEAAMT ALKSARDQMNRPGQVSLMLVMSGSDRDKLLRLVVSAGAPFYGSQIQALPPLDTDFIAHVAGLVEAQRPDLVPVDRAALQA AFAAFGHRPQFFMAAMGAVLSPLSGHSGRFEPALQQAAHDQQARDEAQMESDYLGLKPTEQVVLWRMLAQGPRFRPYDAE ALRFYRDKLDRPVSVQQAQKALESLRQRTPALVWKSARGEYAVEDAAMHRWFEARLAAGMWPPGQRQGSTPLASG
Sequences:
>Translated_395_residues MIAYHRTALAQQLVQALQGRLLLGDAHNGLFLAAPRRTGKSTFLQGDLAPALRQAGVVVVYVDLWADIRRDPGPLIAEAI AQSLQAHLGLVARTAKKAGVKGVKVAGALDIDTSRIGQVDGLTLVDALRNLQQAAGRPVALIIDEAQHALTSEAGEAAMT ALKSARDQMNRPGQVSLMLVMSGSDRDKLLRLVVSAGAPFYGSQIQALPPLDTDFIAHVAGLVEAQRPDLVPVDRAALQA AFAAFGHRPQFFMAAMGAVLSPLSGHSGRFEPALQQAAHDQQARDEAQMESDYLGLKPTEQVVLWRMLAQGPRFRPYDAE ALRFYRDKLDRPVSVQQAQKALESLRQRTPALVWKSARGEYAVEDAAMHRWFEARLAAGMWPPGQRQGSTPLASG >Mature_395_residues MIAYHRTALAQQLVQALQGRLLLGDAHNGLFLAAPRRTGKSTFLQGDLAPALRQAGVVVVYVDLWADIRRDPGPLIAEAI AQSLQAHLGLVARTAKKAGVKGVKVAGALDIDTSRIGQVDGLTLVDALRNLQQAAGRPVALIIDEAQHALTSEAGEAAMT ALKSARDQMNRPGQVSLMLVMSGSDRDKLLRLVVSAGAPFYGSQIQALPPLDTDFIAHVAGLVEAQRPDLVPVDRAALQA AFAAFGHRPQFFMAAMGAVLSPLSGHSGRFEPALQQAAHDQQARDEAQMESDYLGLKPTEQVVLWRMLAQGPRFRPYDAE ALRFYRDKLDRPVSVQQAQKALESLRQRTPALVWKSARGEYAVEDAAMHRWFEARLAAGMWPPGQRQGSTPLASG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42688; Mature: 42688
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIAYHRTALAQQLVQALQGRLLLGDAHNGLFLAAPRRTGKSTFLQGDLAPALRQAGVVVV CCCCHHHHHHHHHHHHHCCCEEEEECCCCEEEECCCCCCCCCEECCHHHHHHHHCCEEEE YVDLWADIRRDPGPLIAEAIAQSLQAHLGLVARTAKKAGVKGVKVAGALDIDTSRIGQVD EEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCHHHCCCCC GLTLVDALRNLQQAAGRPVALIIDEAQHALTSEAGEAAMTALKSARDQMNRPGQVSLMLV CHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE MSGSDRDKLLRLVVSAGAPFYGSQIQALPPLDTDFIAHVAGLVEAQRPDLVPVDRAALQA ECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHH AFAAFGHRPQFFMAAMGAVLSPLSGHSGRFEPALQQAAHDQQARDEAQMESDYLGLKPTE HHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHH QVVLWRMLAQGPRFRPYDAEALRFYRDKLDRPVSVQQAQKALESLRQRTPALVWKSARGE HHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCHHHEECCCCCC YAVEDAAMHRWFEARLAAGMWPPGQRQGSTPLASG HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MIAYHRTALAQQLVQALQGRLLLGDAHNGLFLAAPRRTGKSTFLQGDLAPALRQAGVVVV CCCCHHHHHHHHHHHHHCCCEEEEECCCCEEEECCCCCCCCCEECCHHHHHHHHCCEEEE YVDLWADIRRDPGPLIAEAIAQSLQAHLGLVARTAKKAGVKGVKVAGALDIDTSRIGQVD EEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCHHHCCCCC GLTLVDALRNLQQAAGRPVALIIDEAQHALTSEAGEAAMTALKSARDQMNRPGQVSLMLV CHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE MSGSDRDKLLRLVVSAGAPFYGSQIQALPPLDTDFIAHVAGLVEAQRPDLVPVDRAALQA ECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHH AFAAFGHRPQFFMAAMGAVLSPLSGHSGRFEPALQQAAHDQQARDEAQMESDYLGLKPTE HHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHH QVVLWRMLAQGPRFRPYDAEALRFYRDKLDRPVSVQQAQKALESLRQRTPALVWKSARGE HHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCHHHEECCCCCC YAVEDAAMHRWFEARLAAGMWPPGQRQGSTPLASG HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA