Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is yeiH [C]
Identifier: 120612661
GI number: 120612661
Start: 4472362
End: 4473402
Strand: Direct
Name: yeiH [C]
Synonym: Aave_4024
Alternate gene names: 120612661
Gene position: 4472362-4473402 (Clockwise)
Preceding gene: 120612659
Following gene: 120612662
Centisome position: 83.55
GC content: 72.33
Gene sequence:
>1041_bases ATGAAGACATATGGAACGCCTTCCGGCGGCTTTCTCCGCTGGCGGACCGGTCTCGGCCCGGCGGCAGCCCGCACCCTCGC CTTGTGGCCCGGCCTGCTCGTGTGCGCCGTGATCGCGCTCGCCGCCACCTTCATCGCGGAGCACCACGGCGGCCCGCAAC TGCTCTACGCACTGCTGATCGGGCTGGCCTGCAATTTCCTGGCCGGGGTGCCGCGCGTGGCGGCCGGCGTGGCGTTCTGC GCCCGCACGGGGCTGCGCTGCGGCGTGGCGCTGCTCGGCGCGCGCATCACGGTGGGCCAGGTGGCCAGCCTGGGAGCGGC CACGGGCATCGGCATCGCCTGCTCGGTGATGGCGACCATTCTTTTCGGGGTGTTTCTGGCCGCCGTCATGCGGCGCCCGC GCGAAGAGGGCGTGATCTCCGGCTGCTCCGTCGGCATCTGCGGCGCCTCGGCCGCGCTCGCGGTGGCGGCCGCCCTCCCC CCCACGAAAGAGAACGAGCGCTTCACCCTGCTCGCCGTGGTCGGGGTGACGCTGCTGTCCACGCTCGCGATGGTGCTCTA TCCGCTGCTGCTCAGCGCCGTGCACGCCTCACCGCGGGCGGCCGGCATCTTCCTGGGCGGCACCATCCATGACATCGCCC AGGTGGTGGCCGCCGGGCTGATCCTCGGCCCCCAGGCGGGCGAGACCGCCACCATCGTGAAACTCTTCCGCGTGGCGATG CTGGTGCCCATCGTGGCCACCATCGCCCTGCTCTACCGCGGCCGCCCGGGCGCGCCGGTGGGCTCGCGCATCCCGGCCGT TCCGCCGTTCCTGCTGTGGTTCCTGTTCTTCGTGGCACTCACGTCCCTGGGCGTGATCGGCCCCGCCACCGCGGCGGTGG CCGACGAGACCTCGCGCTGGCTGCTGGTCGCGGCGATCGGCGCCGCGGGCATCAAGACGCACTTCTCCGACCTGCTGCAG CTGAGCTGGCGGCCCGTCGTGCTGCTGCTCGGGGAGACGGTGTTCATCGCGCTGGCCGTCTTCGCGTGGTCGATGGCGTG A
Upstream 100 bases:
>100_bases CGTCAGGTGGAGCCGGTCCGGCGATTGACCTGTTTTTTGGTTCATGGTGAACCGAATTATCTGTTTTTTGCTTTATGCGA AAAACATATGCTCATTCTCC
Downstream 100 bases:
>100_bases GGCGCGGTTCTGGCCGCCGCTAGCTGTGATGTCTCAATAGGTTGTTCATCCAGGCCCGACCTGGGAAGCTGTGGTTACCA GGCCCCAGCAACTCAGGACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 346; Mature: 346
Protein sequence:
>346_residues MKTYGTPSGGFLRWRTGLGPAAARTLALWPGLLVCAVIALAATFIAEHHGGPQLLYALLIGLACNFLAGVPRVAAGVAFC ARTGLRCGVALLGARITVGQVASLGAATGIGIACSVMATILFGVFLAAVMRRPREEGVISGCSVGICGASAALAVAAALP PTKENERFTLLAVVGVTLLSTLAMVLYPLLLSAVHASPRAAGIFLGGTIHDIAQVVAAGLILGPQAGETATIVKLFRVAM LVPIVATIALLYRGRPGAPVGSRIPAVPPFLLWFLFFVALTSLGVIGPATAAVADETSRWLLVAAIGAAGIKTHFSDLLQ LSWRPVVLLLGETVFIALAVFAWSMA
Sequences:
>Translated_346_residues MKTYGTPSGGFLRWRTGLGPAAARTLALWPGLLVCAVIALAATFIAEHHGGPQLLYALLIGLACNFLAGVPRVAAGVAFC ARTGLRCGVALLGARITVGQVASLGAATGIGIACSVMATILFGVFLAAVMRRPREEGVISGCSVGICGASAALAVAAALP PTKENERFTLLAVVGVTLLSTLAMVLYPLLLSAVHASPRAAGIFLGGTIHDIAQVVAAGLILGPQAGETATIVKLFRVAM LVPIVATIALLYRGRPGAPVGSRIPAVPPFLLWFLFFVALTSLGVIGPATAAVADETSRWLLVAAIGAAGIKTHFSDLLQ LSWRPVVLLLGETVFIALAVFAWSMA >Mature_346_residues MKTYGTPSGGFLRWRTGLGPAAARTLALWPGLLVCAVIALAATFIAEHHGGPQLLYALLIGLACNFLAGVPRVAAGVAFC ARTGLRCGVALLGARITVGQVASLGAATGIGIACSVMATILFGVFLAAVMRRPREEGVISGCSVGICGASAALAVAAALP PTKENERFTLLAVVGVTLLSTLAMVLYPLLLSAVHASPRAAGIFLGGTIHDIAQVVAAGLILGPQAGETATIVKLFRVAM LVPIVATIALLYRGRPGAPVGSRIPAVPPFLLWFLFFVALTSLGVIGPATAAVADETSRWLLVAAIGAAGIKTHFSDLLQ LSWRPVVLLLGETVFIALAVFAWSMA
Specific function: Unknown
COG id: COG2855
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0324 family [H]
Homologues:
Organism=Escherichia coli, GI1788482, Length=272, Percent_Identity=31.25, Blast_Score=102, Evalue=3e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018383 [H]
Pfam domain/function: PF03601 Cons_hypoth698 [H]
EC number: NA
Molecular weight: Translated: 35406; Mature: 35406
Theoretical pI: Translated: 10.21; Mature: 10.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTYGTPSGGFLRWRTGLGPAAARTLALWPGLLVCAVIALAATFIAEHHGGPQLLYALLI CCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH GLACNFLAGVPRVAAGVAFCARTGLRCGVALLGARITVGQVASLGAATGIGIACSVMATI HHHHHHHHCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFGVFLAAVMRRPREEGVISGCSVGICGASAALAVAAALPPTKENERFTLLAVVGVTLLS HHHHHHHHHHHCCHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHH TLAMVLYPLLLSAVHASPRAAGIFLGGTIHDIAQVVAAGLILGPQAGETATIVKLFRVAM HHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH LVPIVATIALLYRGRPGAPVGSRIPAVPPFLLWFLFFVALTSLGVIGPATAAVADETSRW HHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCE LLVAAIGAAGIKTHFSDLLQLSWRPVVLLLGETVFIALAVFAWSMA EEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKTYGTPSGGFLRWRTGLGPAAARTLALWPGLLVCAVIALAATFIAEHHGGPQLLYALLI CCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH GLACNFLAGVPRVAAGVAFCARTGLRCGVALLGARITVGQVASLGAATGIGIACSVMATI HHHHHHHHCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFGVFLAAVMRRPREEGVISGCSVGICGASAALAVAAALPPTKENERFTLLAVVGVTLLS HHHHHHHHHHHCCHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHH TLAMVLYPLLLSAVHASPRAAGIFLGGTIHDIAQVVAAGLILGPQAGETATIVKLFRVAM HHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH LVPIVATIALLYRGRPGAPVGSRIPAVPPFLLWFLFFVALTSLGVIGPATAAVADETSRW HHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCE LLVAAIGAAGIKTHFSDLLQLSWRPVVLLLGETVFIALAVFAWSMA EEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12093901 [H]