Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is ushA [C]
Identifier: 120612659
GI number: 120612659
Start: 4469425
End: 4471350
Strand: Direct
Name: ushA [C]
Synonym: Aave_4022
Alternate gene names: 120612659
Gene position: 4469425-4471350 (Clockwise)
Preceding gene: 120612655
Following gene: 120612661
Centisome position: 83.5
GC content: 69.52
Gene sequence:
>1926_bases ATGATGGCCGACGTGTGGAGAAGCAAGGGAAAGAACGTGCGCTGCCTCGCATGGCGCGCTGCCGCGGTGGCGGCGGCAGC GCTGGCGGCGGCCTGCGGCGGCGGATCGGGTGGCGGCGAGCCGATGGAACTCACCATCCTGCACGTCAATGACCACCACT CCACGCTGGAGTCGAAGTCCAGGACCCTGCAGCTCTCCACGGGCGGCTCCGCTCCGGTCGCCGTGGCCGTGGACGCGGGT GGCTTCCCGCGCGTCACCGCGGCGATCGACGAACTTTCCAGGCGCGCGCCCAACGTGCTCAAGCTGCACGCGGGCGACGC CCTGACCGGCACCCTGTATTTCAACCGCGCCGGTGCGGACGGCGAAGCCGACGCGGCCATGATGAACACCGTCTGCTTCG ACGCCTTCACCCTCGGCAACCACGAATTCGACAAGGGCGACACGGGCCTCAAGAACTTCCTGGACCTGCTGCGCAAGGGC AGCTGCAAGACGCCGGCCCTGAGCGCCAACGTGCGCTTCGGCGCCAGCTCCGCGCTCAATGCCGCCAAGGCCCCGGATGC CGTCCAGGCTTCCACCATCGTCGAGCGCGGCGGCCAGAAAATCGGCATCGTCGGCCTCACCATCGCCGGCAAGACCAAGG CCTCCTCCAGCCCCGACCCGGACACCACCTTCGAGGACGAAGCCACCGCCGCCCAGCGCGAGATCGACCGCCTGCGCGGC CAGGGCATCAACAAGATCGTGCTGATGAGCCACATCGGCTACGACGCCGACCGCCAGATCGTGCCGAAGCTTTCCGGCGT GGACGTGGTGGTGGGCGGCGACTCGCACACCCTGCTCGGCCCGGACGCGCTCAAGGCCACCGGCGTGGGCACGCCCGGCG GTGCCTACCCGACGCGCACCACCGACAAGGACGGTCGCACCGTCTGCATCGTCCAGGCCTGGGAATACGCCCAGGTGGTG GGCGAGCTGAAGGTGAACTTCGATGCCGACGGCAACGTCACCCAGTGCGCCGGCACCCCGCACGTGCTCATCGGCGACAA CTTCACCATCGGCGGCAAGGCCCCGACGGATGCGGAAGCCAAGGCCCTGCAGGCCAGCGTGGCCGCCACCGGCTTCCTGC GCGTGATCCAGCCCTCCGCCGCGGCCACCGCCACCCTGCAGCCCTTCAAGGACCGCGTGACCGTCTTCAACCGCACCCAG GTCGCCGTGGCGCCCGAGGAACTGTGCTCCCGCCGCGTGCCCGGCGGCGCCGGCTCCACCGACTACAGCCGCTCCAGCGC CGCCTGCAACGCCGAAGGCAGCGTGAGCGCGCGCGGCGGCGACATCCAGCAACTCGTCGCCCAGGCGTATCTCGACGTGG CCAACGCACGTTACGGCGGCGCCGACATCTCGCTGCAAAGCGGCGGCGGCGTGCGCATCCCCCTGCAGGGCACCGTCTCG GCCGCCCAGGTCATCCAGGTACTGCCCTTCGGCAACATGCTCTTCCGCCTGGACGTGACCGGCACGGAAGTGAAGGCCAT GCTGGAAGACGGCATGGAAGCCGTCTTCGGCACCGGCGGCTCCACCGGCCCCTACCCCTACACCGGCGGCCTGCGCTTCG ACGTGAATGCCGCCGCCGCGGCCGGCCAGCGCGTGTCCGGCATCGAAGTGCGCAACGCCGCCTCGGGCGCCTGGGAGCCG CTCAATGCGACGAAGACGTACAAGCTCTTCGTGTTGAGCTTCAACGCCACGGGCGGCGATGGGTACAAGACGCTGGCGGC CGTGCCTGCGGCGCGGCGGCTGGACATCGGCGTGCTGGATGCGGATGTGTTCTTCAGCTACATCGAAAAGCAGGGGAAGG ACGGGACGACGGGGTTGCCGACGCTCAAGCGGTTGCCGCGGGACCTGTACAGCACGAAGACGTTCCAGGGACCGGCAGGA AAGTAA
Upstream 100 bases:
>100_bases AAATCGTGCCCAAACCACCCGCTCCGCCTCCCCATTCATCGTTCTGTCACGCCGCGCCGCAAGGATGCGGACTTTTGTCA CAAGCAGTAAGGAGAGCGCC
Downstream 100 bases:
>100_bases GGGAGAGCCCGGGGGACGGAGAGCTACGCATCACCGTTTTTCGAGGCGCCTCCGCCGAAGCAATACCGCAAAAACGCCTC GCCCCCCGCCCCCAGCGTCC
Product: 5'-nucleotidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 641; Mature: 641
Protein sequence:
>641_residues MMADVWRSKGKNVRCLAWRAAAVAAAALAAACGGGSGGGEPMELTILHVNDHHSTLESKSRTLQLSTGGSAPVAVAVDAG GFPRVTAAIDELSRRAPNVLKLHAGDALTGTLYFNRAGADGEADAAMMNTVCFDAFTLGNHEFDKGDTGLKNFLDLLRKG SCKTPALSANVRFGASSALNAAKAPDAVQASTIVERGGQKIGIVGLTIAGKTKASSSPDPDTTFEDEATAAQREIDRLRG QGINKIVLMSHIGYDADRQIVPKLSGVDVVVGGDSHTLLGPDALKATGVGTPGGAYPTRTTDKDGRTVCIVQAWEYAQVV GELKVNFDADGNVTQCAGTPHVLIGDNFTIGGKAPTDAEAKALQASVAATGFLRVIQPSAAATATLQPFKDRVTVFNRTQ VAVAPEELCSRRVPGGAGSTDYSRSSAACNAEGSVSARGGDIQQLVAQAYLDVANARYGGADISLQSGGGVRIPLQGTVS AAQVIQVLPFGNMLFRLDVTGTEVKAMLEDGMEAVFGTGGSTGPYPYTGGLRFDVNAAAAAGQRVSGIEVRNAASGAWEP LNATKTYKLFVLSFNATGGDGYKTLAAVPAARRLDIGVLDADVFFSYIEKQGKDGTTGLPTLKRLPRDLYSTKTFQGPAG K
Sequences:
>Translated_641_residues MMADVWRSKGKNVRCLAWRAAAVAAAALAAACGGGSGGGEPMELTILHVNDHHSTLESKSRTLQLSTGGSAPVAVAVDAG GFPRVTAAIDELSRRAPNVLKLHAGDALTGTLYFNRAGADGEADAAMMNTVCFDAFTLGNHEFDKGDTGLKNFLDLLRKG SCKTPALSANVRFGASSALNAAKAPDAVQASTIVERGGQKIGIVGLTIAGKTKASSSPDPDTTFEDEATAAQREIDRLRG QGINKIVLMSHIGYDADRQIVPKLSGVDVVVGGDSHTLLGPDALKATGVGTPGGAYPTRTTDKDGRTVCIVQAWEYAQVV GELKVNFDADGNVTQCAGTPHVLIGDNFTIGGKAPTDAEAKALQASVAATGFLRVIQPSAAATATLQPFKDRVTVFNRTQ VAVAPEELCSRRVPGGAGSTDYSRSSAACNAEGSVSARGGDIQQLVAQAYLDVANARYGGADISLQSGGGVRIPLQGTVS AAQVIQVLPFGNMLFRLDVTGTEVKAMLEDGMEAVFGTGGSTGPYPYTGGLRFDVNAAAAAGQRVSGIEVRNAASGAWEP LNATKTYKLFVLSFNATGGDGYKTLAAVPAARRLDIGVLDADVFFSYIEKQGKDGTTGLPTLKRLPRDLYSTKTFQGPAG K >Mature_641_residues MMADVWRSKGKNVRCLAWRAAAVAAAALAAACGGGSGGGEPMELTILHVNDHHSTLESKSRTLQLSTGGSAPVAVAVDAG GFPRVTAAIDELSRRAPNVLKLHAGDALTGTLYFNRAGADGEADAAMMNTVCFDAFTLGNHEFDKGDTGLKNFLDLLRKG SCKTPALSANVRFGASSALNAAKAPDAVQASTIVERGGQKIGIVGLTIAGKTKASSSPDPDTTFEDEATAAQREIDRLRG QGINKIVLMSHIGYDADRQIVPKLSGVDVVVGGDSHTLLGPDALKATGVGTPGGAYPTRTTDKDGRTVCIVQAWEYAQVV GELKVNFDADGNVTQCAGTPHVLIGDNFTIGGKAPTDAEAKALQASVAATGFLRVIQPSAAATATLQPFKDRVTVFNRTQ VAVAPEELCSRRVPGGAGSTDYSRSSAACNAEGSVSARGGDIQQLVAQAYLDVANARYGGADISLQSGGGVRIPLQGTVS AAQVIQVLPFGNMLFRLDVTGTEVKAMLEDGMEAVFGTGGSTGPYPYTGGLRFDVNAAAAAGQRVSGIEVRNAASGAWEP LNATKTYKLFVLSFNATGGDGYKTLAAVPAARRLDIGVLDADVFFSYIEKQGKDGTTGLPTLKRLPRDLYSTKTFQGPAG K
Specific function: Degradation Of External Udp-Glucose To Uridine Monophosphate And Glucose-1-Phosphate, Which Can Then Be Used By The Cell. [C]
COG id: COG0737
COG function: function code F; 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 5'-nucleotidase family [H]
Homologues:
Organism=Homo sapiens, GI4505467, Length=611, Percent_Identity=31.5875613747954, Blast_Score=206, Evalue=7e-53, Organism=Escherichia coli, GI1786687, Length=590, Percent_Identity=26.1016949152542, Blast_Score=117, Evalue=3e-27, Organism=Drosophila melanogaster, GI19922446, Length=579, Percent_Identity=29.0155440414508, Blast_Score=189, Evalue=5e-48, Organism=Drosophila melanogaster, GI24654424, Length=579, Percent_Identity=29.0155440414508, Blast_Score=189, Evalue=5e-48, Organism=Drosophila melanogaster, GI24641187, Length=606, Percent_Identity=27.3927392739274, Blast_Score=188, Evalue=1e-47, Organism=Drosophila melanogaster, GI28573524, Length=558, Percent_Identity=29.2114695340502, Blast_Score=180, Evalue=3e-45, Organism=Drosophila melanogaster, GI19922444, Length=574, Percent_Identity=29.0940766550523, Blast_Score=176, Evalue=4e-44, Organism=Drosophila melanogaster, GI221329836, Length=460, Percent_Identity=28.4782608695652, Blast_Score=152, Evalue=9e-37, Organism=Drosophila melanogaster, GI161076508, Length=242, Percent_Identity=28.5123966942149, Blast_Score=68, Evalue=2e-11, Organism=Drosophila melanogaster, GI24652512, Length=242, Percent_Identity=28.5123966942149, Blast_Score=67, Evalue=3e-11, Organism=Drosophila melanogaster, GI19921980, Length=242, Percent_Identity=28.5123966942149, Blast_Score=67, Evalue=4e-11,
Paralogues:
None
Copy number: 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008334 - InterPro: IPR006146 - InterPro: IPR006179 - InterPro: IPR004843 - InterPro: IPR006420 [H]
Pfam domain/function: PF02872 5_nucleotid_C; PF00149 Metallophos [H]
EC number: =3.1.3.5 [H]
Molecular weight: Translated: 66301; Mature: 66301
Theoretical pI: Translated: 7.47; Mature: 7.47
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00786 5_NUCLEOTIDASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMADVWRSKGKNVRCLAWRAAAVAAAALAAACGGGSGGGEPMELTILHVNDHHSTLESKS CCCHHHHHCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCHHHHHCCC RTLQLSTGGSAPVAVAVDAGGFPRVTAAIDELSRRAPNVLKLHAGDALTGTLYFNRAGAD CEEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCEEEEEEEEEECCCC GEADAAMMNTVCFDAFTLGNHEFDKGDTGLKNFLDLLRKGSCKTPALSANVRFGASSALN CCCHHHHHHHHHHHEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCEECEEEECCHHHCC AAKAPDAVQASTIVERGGQKIGIVGLTIAGKTKASSSPDPDTTFEDEATAAQREIDRLRG CCCCCCHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC QGINKIVLMSHIGYDADRQIVPKLSGVDVVVGGDSHTLLGPDALKATGVGTPGGAYPTRT CCCCEEEEEEECCCCCCCHHCCCCCCCEEEECCCCCEEECCCHHHCCCCCCCCCCCCCCC TDKDGRTVCIVQAWEYAQVVGELKVNFDADGNVTQCAGTPHVLIGDNFTIGGKAPTDAEA CCCCCCEEEEEECCHHHHHHEEEEEEECCCCCEEEECCCCEEEECCCEEECCCCCCCHHH KALQASVAATGFLRVIQPSAAATATLQPFKDRVTVFNRTQVAVAPEELCSRRVPGGAGST HHHHHHHHHHHHHEEECCCCCCEEECCCCCCCEEEEECEEEEECHHHHHHCCCCCCCCCC DYSRSSAACNAEGSVSARGGDIQQLVAQAYLDVANARYGGADISLQSGGGVRIPLQGTVS CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEECCCCC AAQVIQVLPFGNMLFRLDVTGTEVKAMLEDGMEAVFGTGGSTGPYPYTGGLRFDVNAAAA HHHHHHHCCCCCEEEEEECCCHHHHHHHHHCHHHEECCCCCCCCCCCCCCEEEECCHHHH AGQRVSGIEVRNAASGAWEPLNATKTYKLFVLSFNATGGDGYKTLAAVPAARRLDIGVLD CCCCCCCEEEECCCCCCCCCCCCCCEEEEEEEEEECCCCCCCHHHHHCCCCCCCEEEEEC ADVFFSYIEKQGKDGTTGLPTLKRLPRDLYSTKTFQGPAGK HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MMADVWRSKGKNVRCLAWRAAAVAAAALAAACGGGSGGGEPMELTILHVNDHHSTLESKS CCCHHHHHCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCHHHHHCCC RTLQLSTGGSAPVAVAVDAGGFPRVTAAIDELSRRAPNVLKLHAGDALTGTLYFNRAGAD CEEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCEEEEEEEEEECCCC GEADAAMMNTVCFDAFTLGNHEFDKGDTGLKNFLDLLRKGSCKTPALSANVRFGASSALN CCCHHHHHHHHHHHEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCEECEEEECCHHHCC AAKAPDAVQASTIVERGGQKIGIVGLTIAGKTKASSSPDPDTTFEDEATAAQREIDRLRG CCCCCCHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC QGINKIVLMSHIGYDADRQIVPKLSGVDVVVGGDSHTLLGPDALKATGVGTPGGAYPTRT CCCCEEEEEEECCCCCCCHHCCCCCCCEEEECCCCCEEECCCHHHCCCCCCCCCCCCCCC TDKDGRTVCIVQAWEYAQVVGELKVNFDADGNVTQCAGTPHVLIGDNFTIGGKAPTDAEA CCCCCCEEEEEECCHHHHHHEEEEEEECCCCCEEEECCCCEEEECCCEEECCCCCCCHHH KALQASVAATGFLRVIQPSAAATATLQPFKDRVTVFNRTQVAVAPEELCSRRVPGGAGST HHHHHHHHHHHHHEEECCCCCCEEECCCCCCCEEEEECEEEEECHHHHHHCCCCCCCCCC DYSRSSAACNAEGSVSARGGDIQQLVAQAYLDVANARYGGADISLQSGGGVRIPLQGTVS CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEECCCCC AAQVIQVLPFGNMLFRLDVTGTEVKAMLEDGMEAVFGTGGSTGPYPYTGGLRFDVNAAAA HHHHHHHCCCCCEEEEEECCCHHHHHHHHHCHHHEECCCCCCCCCCCCCCEEEECCHHHH AGQRVSGIEVRNAASGAWEPLNATKTYKLFVLSFNATGGDGYKTLAAVPAARRLDIGVLD CCCCCCCEEEECCCCCCCCCCCCCCEEEEEEEEEECCCCCCCHHHHHCCCCCCCEEEEEC ADVFFSYIEKQGKDGTTGLPTLKRLPRDLYSTKTFQGPAGK HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9665876 [H]