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The map label for this gene is 120612646

Identifier: 120612646

GI number: 120612646

Start: 4454162

End: 4456432

Strand: Reverse

Name: 120612646

Synonym: Aave_4009

Alternate gene names: NA

Gene position: 4456432-4454162 (Counterclockwise)

Preceding gene: 120612647

Following gene: 120612645

Centisome position: 83.25

GC content: 65.48

Gene sequence:

>2271_bases
ATGACACGCCGCGTCACCATCCGGACGCCCCTGGGAGAGCAGCTGCAATTCCGGCAGTTGCGGGGCAGCGAGGAGCTGAG
CCAGCTTTTCTCCTTCGACATCGACCTGCTCTCGGAAGGCCGCGACATCGATCCCAAGGCCTTGCTCGGCAAGACGGCGA
CGGTGGAGATCGAGACCGAAGGCGGTGGCAAGCGTTACCTGGACGGCCTGGTCACGCGCTTCGGCATGCAGGGGCAGGAC
CATCGGCTGTACTCCTACCACCTGCGCCTGCAGCCCTGGCTGTGGGTGGCCACGCGGCGGCAGGACTTCCGCATCTTCCA
GTTCAAGACCGTCCCGCAGATCGTCCAGGAAGTGCTGGGTCGCTACGGTTACCCCATGCAGCTCAAGCTCACGCGCGCCT
ACCGTGCCTGGGATTACTGCGTGCAGTACGGCGAGAGCGACTTCGACTTCGTTTCCCGCCTGCTCGAGCATGAAGGGGCG
TACTACTACTTCCAGCACGCGAGCGGCCAGCACACCCTGGTGATCGCCGACGACATCGTGGCCGGCCACGAGCCTTTGCC
GGGCGCGGCCGTGATCCCGTTCTACCCACCCGAGAAGTCGGCCGTCGCGGACCGCGAGAACATCCACGCCTGGACCCTGG
GCGAGGAGATCAAGTCCGGCCGCTACTACAACGACGACTACGACTTCCGCAAACCGAGGTCGGACCTCTCCAACATGCGC
CAGCAGCCCCCGGGGCATGCGCACGATGCCTACGAGATCTACGAATGGCCGGGCGGCTACGTGCAGCATGGCGATGGTGA
GCAGTACGCCCGGGTACGCCTGCAGGAAGGCCTGACGGGCCACAGCGTCGTCAAAGGCGAATCGCGCCACCGCAGCCTCG
CGACGGGCTACACCTTCACGCTGGAGAACTACCCGCGGGGCGACCAGAACCGGCAGTACCTCATCACCGGCGTCACCTAC
CACCTGCACGAGAACCCGAGAAGCTCATCCTTCAACAGCGCCAAGCCGGGTGAATCGCTCAAGCACAACGAAGAGCAGGG
GTTGTTCCAGAAGTTCAGCCTCACGGCCCAGCCCACGAGCCTGCCCTACACCCCGGCCAGAAAGACCCCCAAACCCCGCA
CGACCGGCCCGCAGACCGCCGTCGTGGTCGGCCCGGCGGGCGAGGAAATCTGGACGGACGAGTACGGCCGCATCAAGGTG
CAGTTCCACTGGGACCGGCTGGGGGCGATGGACGAGAACTCCAGTTGCTGGATGCGGGTGGCCACGAGCTGGGCGGGCTC
GGGGTTCGGAGCGATCTCGATCCCGCGCATCGGGCACGAAGTGGTGGTCGACTTCCTCAACGGCGATCCTGACTATCCGC
TGGTCGTGGGCTGCGTGTACAACGCGGCGAACATGCCGCCCTGGGCCTTGCCGGGCAATGCCACGCAGTCGGGCATCAAG
ACCAAGTCCAGCAAGGGCGGGGCCTTCGGCGACGGGATGAAGAACGGCGCGGGCGATGCCAACGCGATCCGCTTCGAGGA
CAAGAAGGGCGCAGAGCAATTATGGCTGCATGCGCAGAAGGACCAGCTCATCGAGGTGGAAAACGACGAGGACCACTGGG
TGGGCCAGGACCGGCGCAAGACCATCGACCGGGACGAGACGAACGTGATCCACCGGGACCGGACGGAAACGGTGGACCGC
AACGAGAAAATCACGGTGCATGGCTGGCGCACCGAGGAAGTGGATGGCGACGAGACCATCACCATCCACTCCAACCGCAA
GGAGCGTGTGGACCACGACGAGACGATCTCGATCGGCGACAACCGCGACGAGACCGTGGGCGCCAACGAAGACATCCGCA
TCGGCAGCAATCGCAGCAAGACCGTCGGGCAGAGCGAGAAGGACCGCATCGGCACCAGCTGGAACATCCGGGTGGGCACG
ATGAAGACCGAGACCATCGGGATGACGGCCATGCAGAACGTGGGCCTGGCCAAGATGGTGAACGTGGGGCTGGCCTACAG
CGTCAACATCGGCGGCGTGCGCAGCGACATCGTGGGCGCCAACTGGACCCGCACGGTCATCGGCAGCGACTCGGTGAGCG
TGGGCTCGGACCGCAAGGCGAGCGTGAGCGGCACGGACAGCCTGGAGGTGTCTGGCGCGCTCACGGTGAAGGCCAGGACC
ATCACGCTGGAGGCGGGCGACGAGATCACGCTGCGCTGCGGATCGAGCACGGTGCGGCTGACGCCCGCGCTCATCGAAGT
GCTGTCCTCGCTGGACAAGCTCAACTGCTAG

Upstream 100 bases:

>100_bases
AAAAAATCATTTCAATCTGCTTTTCAAGCAGTTTATTGAAAACTATGATCCGGCCGTTCCAACTTGACTCTGCAGCAACG
AGAGGGCTGCAGCCATAACA

Downstream 100 bases:

>100_bases
GCGCCGATGCGAGGTGCTCCGTGCGCACGTGCGGGGCATCGCAACCACCATCCAGAGAGCCACAGGTACTGCTTGCTTGA
AGGAGCGCAGTGCCTTGGCC

Product: Rhs element Vgr protein

Products: NA

Alternate protein names: Type VI Secretion System Vgr Family Protein; Rhs-Family Protein; VgrG Protein; Rhs Family Protein; Rhs Element Vgr Family Protein; Rhs Accessory Genetic Element; RHS Accessory Genetic Element; Vgr Protein; VgrG Family T6SS G; Replication/Virulence Associated Protein; Conserved Hypothethical Protein; Rhs Element Vgr Family; Vgr-Related Protein; Rhs Element Vgr ProteinGp5-Like; Type VI Secretion System VgrG Family Protein; Rhs Element Vgr Protein Subfamily; Rhs Element Protein; Type VI Secretion System Effector Protein VgrS; VrgG Protein; Rhs Protein; Rhs/Vgr-Family Protein; Vgr Family Type VI Secretion System

Number of amino acids: Translated: 756; Mature: 755

Protein sequence:

>756_residues
MTRRVTIRTPLGEQLQFRQLRGSEELSQLFSFDIDLLSEGRDIDPKALLGKTATVEIETEGGGKRYLDGLVTRFGMQGQD
HRLYSYHLRLQPWLWVATRRQDFRIFQFKTVPQIVQEVLGRYGYPMQLKLTRAYRAWDYCVQYGESDFDFVSRLLEHEGA
YYYFQHASGQHTLVIADDIVAGHEPLPGAAVIPFYPPEKSAVADRENIHAWTLGEEIKSGRYYNDDYDFRKPRSDLSNMR
QQPPGHAHDAYEIYEWPGGYVQHGDGEQYARVRLQEGLTGHSVVKGESRHRSLATGYTFTLENYPRGDQNRQYLITGVTY
HLHENPRSSSFNSAKPGESLKHNEEQGLFQKFSLTAQPTSLPYTPARKTPKPRTTGPQTAVVVGPAGEEIWTDEYGRIKV
QFHWDRLGAMDENSSCWMRVATSWAGSGFGAISIPRIGHEVVVDFLNGDPDYPLVVGCVYNAANMPPWALPGNATQSGIK
TKSSKGGAFGDGMKNGAGDANAIRFEDKKGAEQLWLHAQKDQLIEVENDEDHWVGQDRRKTIDRDETNVIHRDRTETVDR
NEKITVHGWRTEEVDGDETITIHSNRKERVDHDETISIGDNRDETVGANEDIRIGSNRSKTVGQSEKDRIGTSWNIRVGT
MKTETIGMTAMQNVGLAKMVNVGLAYSVNIGGVRSDIVGANWTRTVIGSDSVSVGSDRKASVSGTDSLEVSGALTVKART
ITLEAGDEITLRCGSSTVRLTPALIEVLSSLDKLNC

Sequences:

>Translated_756_residues
MTRRVTIRTPLGEQLQFRQLRGSEELSQLFSFDIDLLSEGRDIDPKALLGKTATVEIETEGGGKRYLDGLVTRFGMQGQD
HRLYSYHLRLQPWLWVATRRQDFRIFQFKTVPQIVQEVLGRYGYPMQLKLTRAYRAWDYCVQYGESDFDFVSRLLEHEGA
YYYFQHASGQHTLVIADDIVAGHEPLPGAAVIPFYPPEKSAVADRENIHAWTLGEEIKSGRYYNDDYDFRKPRSDLSNMR
QQPPGHAHDAYEIYEWPGGYVQHGDGEQYARVRLQEGLTGHSVVKGESRHRSLATGYTFTLENYPRGDQNRQYLITGVTY
HLHENPRSSSFNSAKPGESLKHNEEQGLFQKFSLTAQPTSLPYTPARKTPKPRTTGPQTAVVVGPAGEEIWTDEYGRIKV
QFHWDRLGAMDENSSCWMRVATSWAGSGFGAISIPRIGHEVVVDFLNGDPDYPLVVGCVYNAANMPPWALPGNATQSGIK
TKSSKGGAFGDGMKNGAGDANAIRFEDKKGAEQLWLHAQKDQLIEVENDEDHWVGQDRRKTIDRDETNVIHRDRTETVDR
NEKITVHGWRTEEVDGDETITIHSNRKERVDHDETISIGDNRDETVGANEDIRIGSNRSKTVGQSEKDRIGTSWNIRVGT
MKTETIGMTAMQNVGLAKMVNVGLAYSVNIGGVRSDIVGANWTRTVIGSDSVSVGSDRKASVSGTDSLEVSGALTVKART
ITLEAGDEITLRCGSSTVRLTPALIEVLSSLDKLNC
>Mature_755_residues
TRRVTIRTPLGEQLQFRQLRGSEELSQLFSFDIDLLSEGRDIDPKALLGKTATVEIETEGGGKRYLDGLVTRFGMQGQDH
RLYSYHLRLQPWLWVATRRQDFRIFQFKTVPQIVQEVLGRYGYPMQLKLTRAYRAWDYCVQYGESDFDFVSRLLEHEGAY
YYFQHASGQHTLVIADDIVAGHEPLPGAAVIPFYPPEKSAVADRENIHAWTLGEEIKSGRYYNDDYDFRKPRSDLSNMRQ
QPPGHAHDAYEIYEWPGGYVQHGDGEQYARVRLQEGLTGHSVVKGESRHRSLATGYTFTLENYPRGDQNRQYLITGVTYH
LHENPRSSSFNSAKPGESLKHNEEQGLFQKFSLTAQPTSLPYTPARKTPKPRTTGPQTAVVVGPAGEEIWTDEYGRIKVQ
FHWDRLGAMDENSSCWMRVATSWAGSGFGAISIPRIGHEVVVDFLNGDPDYPLVVGCVYNAANMPPWALPGNATQSGIKT
KSSKGGAFGDGMKNGAGDANAIRFEDKKGAEQLWLHAQKDQLIEVENDEDHWVGQDRRKTIDRDETNVIHRDRTETVDRN
EKITVHGWRTEEVDGDETITIHSNRKERVDHDETISIGDNRDETVGANEDIRIGSNRSKTVGQSEKDRIGTSWNIRVGTM
KTETIGMTAMQNVGLAKMVNVGLAYSVNIGGVRSDIVGANWTRTVIGSDSVSVGSDRKASVSGTDSLEVSGALTVKARTI
TLEAGDEITLRCGSSTVRLTPALIEVLSSLDKLNC

Specific function: Unknown

COG id: COG3501

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 84580; Mature: 84449

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRRVTIRTPLGEQLQFRQLRGSEELSQLFSFDIDLLSEGRDIDPKALLGKTATVEIETE
CCCEEEEECCCCCHHHHHHHCCHHHHHHHHHCCHHHHCCCCCCCHHHHCCCEEEEEEEEC
GGGKRYLDGLVTRFGMQGQDHRLYSYHLRLQPWLWVATRRQDFRIFQFKTVPQIVQEVLG
CCCHHHHHHHHHHHCCCCCCCEEEEEEEEECCEEEEEECCCCEEEEEECCHHHHHHHHHH
RYGYPMQLKLTRAYRAWDYCVQYGESDFDFVSRLLEHEGAYYYFQHASGQHTLVIADDIV
HCCCCEEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEEECCCCEEEEEECCEE
AGHEPLPGAAVIPFYPPEKSAVADRENIHAWTLGEEIKSGRYYNDDYDFRKPRSDLSNMR
CCCCCCCCCEEEECCCCCCCCCCCCCCCEEEECCHHHHCCCEECCCCCCCCCHHHHHHHH
QQPPGHAHDAYEIYEWPGGYVQHGDGEQYARVRLQEGLTGHSVVKGESRHRSLATGYTFT
HCCCCCCCCCEEEEECCCCCEECCCCCHHHHHHHHCCCCCCEEECCCCCCCEEECCEEEE
LENYPRGDQNRQYLITGVTYHLHENPRSSSFNSAKPGESLKHNEEQGLFQKFSLTAQPTS
ECCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHCCHHHEEECCCCCC
LPYTPARKTPKPRTTGPQTAVVVGPAGEEIWTDEYGRIKVQFHWDRLGAMDENSSCWMRV
CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEEEHHCCCCCCCCCEEEEE
ATSWAGSGFGAISIPRIGHEVVVDFLNGDPDYPLVVGCVYNAANMPPWALPGNATQSGIK
EECCCCCCCCEEECCCCCHHHEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCC
TKSSKGGAFGDGMKNGAGDANAIRFEDKKGAEQLWLHAQKDQLIEVENDEDHWVGQDRRK
CCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHEEECCCCCEEEEECCCCCCCCCHHHH
TIDRDETNVIHRDRTETVDRNEKITVHGWRTEEVDGDETITIHSNRKERVDHDETISIGD
CCCCCCCCCEECCCCCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCEEEECC
NRDETVGANEDIRIGSNRSKTVGQSEKDRIGTSWNIRVGTMKTETIGMTAMQNVGLAKMV
CCCCCCCCCCCEEECCCCCCCCCCCHHHCCCCEEEEEEEEEEECHHCHHHHHCCCHHHHH
NVGLAYSVNIGGVRSDIVGANWTRTVIGSDSVSVGSDRKASVSGTDSLEVSGALTVKART
CCCEEEEEECCCEECCCCCCCCEEEEECCCCEECCCCCCCCCCCCCCEEECEEEEEEEEE
ITLEAGDEITLRCGSSTVRLTPALIEVLSSLDKLNC
EEEECCCEEEEEECCCEEEECHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TRRVTIRTPLGEQLQFRQLRGSEELSQLFSFDIDLLSEGRDIDPKALLGKTATVEIETE
CCEEEEECCCCCHHHHHHHCCHHHHHHHHHCCHHHHCCCCCCCHHHHCCCEEEEEEEEC
GGGKRYLDGLVTRFGMQGQDHRLYSYHLRLQPWLWVATRRQDFRIFQFKTVPQIVQEVLG
CCCHHHHHHHHHHHCCCCCCCEEEEEEEEECCEEEEEECCCCEEEEEECCHHHHHHHHHH
RYGYPMQLKLTRAYRAWDYCVQYGESDFDFVSRLLEHEGAYYYFQHASGQHTLVIADDIV
HCCCCEEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEEECCCCEEEEEECCEE
AGHEPLPGAAVIPFYPPEKSAVADRENIHAWTLGEEIKSGRYYNDDYDFRKPRSDLSNMR
CCCCCCCCCEEEECCCCCCCCCCCCCCCEEEECCHHHHCCCEECCCCCCCCCHHHHHHHH
QQPPGHAHDAYEIYEWPGGYVQHGDGEQYARVRLQEGLTGHSVVKGESRHRSLATGYTFT
HCCCCCCCCCEEEEECCCCCEECCCCCHHHHHHHHCCCCCCEEECCCCCCCEEECCEEEE
LENYPRGDQNRQYLITGVTYHLHENPRSSSFNSAKPGESLKHNEEQGLFQKFSLTAQPTS
ECCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHCCHHHEEECCCCCC
LPYTPARKTPKPRTTGPQTAVVVGPAGEEIWTDEYGRIKVQFHWDRLGAMDENSSCWMRV
CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEEEHHCCCCCCCCCEEEEE
ATSWAGSGFGAISIPRIGHEVVVDFLNGDPDYPLVVGCVYNAANMPPWALPGNATQSGIK
EECCCCCCCCEEECCCCCHHHEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCC
TKSSKGGAFGDGMKNGAGDANAIRFEDKKGAEQLWLHAQKDQLIEVENDEDHWVGQDRRK
CCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHEEECCCCCEEEEECCCCCCCCCHHHH
TIDRDETNVIHRDRTETVDRNEKITVHGWRTEEVDGDETITIHSNRKERVDHDETISIGD
CCCCCCCCCEECCCCCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCEEEECC
NRDETVGANEDIRIGSNRSKTVGQSEKDRIGTSWNIRVGTMKTETIGMTAMQNVGLAKMV
CCCCCCCCCCCEEECCCCCCCCCCCHHHCCCCEEEEEEEEEEECHHCHHHHHCCCHHHHH
NVGLAYSVNIGGVRSDIVGANWTRTVIGSDSVSVGSDRKASVSGTDSLEVSGALTVKART
CCCEEEEEECCCEECCCCCCCCEEEEECCCCEECCCCCCCCCCCCCCEEECEEEEEEEEE
ITLEAGDEITLRCGSSTVRLTPALIEVLSSLDKLNC
EEEECCCEEEEEECCCEEEECHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA