| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is rhsD [H]
Identifier: 120612645
GI number: 120612645
Start: 4448632
End: 4454007
Strand: Reverse
Name: rhsD [H]
Synonym: Aave_4008
Alternate gene names: 120612645
Gene position: 4454007-4448632 (Counterclockwise)
Preceding gene: 120612646
Following gene: 120612644
Centisome position: 83.21
GC content: 68.81
Gene sequence:
>5376_bases ATGAGCGGCAAACCCGCGGCCCGGCAGGGCGACTTGACAAAAAAAGGCGGCCCGATCGTCCAGGGCTCGGCGACGGTGCT GATCGGCTCGGCGGGAGGCGTGGCGTGCTCGGTGTGCCCCGGGGGCATGGCGGTGGGCAACCCGGTGAACCCGGCGCTGG GCGCGAAGGTGCTCACGGGGGGCGATGAACTGGACTTCGCGCTGCCCGGGCCATTGCCGCTGGCGTGGCAGCGGGTGTAC AGCAGCTATGTGAACGCGGAGCATGGCGCGGCGTGCGGGCTGCTGGGGTATGGGTGGAAGCTGCCGCTGGAACTCCGGTT GCGGCTGCAATCGGATCGGGTGGTGCTCTTCGATGCATCCGGGCGGGCGATCACCTTTGAAGAGGCGCTGCTGCCGGGGC AGGCGCTCTATAGCAGCAGCGAAGACTTGTGGCTGTTGCGGGGCGGCGGCATGACGGATGTTCATTCCCACGCCATCGCA TCTTCCAAGGACACGAACTCGTCATCTACCCGGACCTCTACCCCGGCCGAACTGCTGCCCTGGGCGCAGCAACCGCGCTG GTCGCACGTGCCGGCGGTGCTGCGTGCGGACCCGGGCTGCGTGATCGCCGTGCCGGGCGCGGGCGGTGCTGGTGCGCCGG TCTGGGTGTTCCTGACGGCGGGCGTATCGGGCGACGGAACAGCTTCGGGCCATGTCCTGCATGCCGTGATCGACCGCTTC GGCCGCAGCCAGCGCTACCAGTGGGGCACGGAAGGCGAACAGCAGGGCCGCGTCGCAGGCATCACCGATGGCAGCGGGCG ACGCTATGCGCTGCGCTACGAGCGCATCGCGCAGGATGCCGGGACAGCACAGACAAGTGCCCATCCCCTGCTGCAACCCG ACGACGGTGTAAGGCTGGTGGGCGTGGACTGCACCTTCAGCCCGCTCGACCCTGCAGTGATACCCGGCGCGGCCCCGCGC CCTCAGCCGCTCGTGGGCTACCGCTACGACAGCGCAGGCAACCTGGCCGAGGTGCTGGGCGCGGACGGCACCGTGCTGCG CCGCTTCGGCTACGACGCATTGCACCGGATGACGGAGCACCAGGTGCGCCAGGGGCCGCAGCACCGCTACGTCTATGAAG ACCAGACCGCGCAGGGCCGCCGCCAGGGATGGGCTGCCCGCCCGGGTGCACGCGTCGCCGAGCAGCACAACGAAGAGGGG CTGTCATACTTCTTCGAGTACAGCCAGGCATCCGCGCAACCTGCGCCATCCACGCACACCACGCAGGCGACCCAGGGCCC GGAGGATGACCAGGATGGCCCGACTCCGGCCACCGCGTCTTTGCCCAGCAATCGCCAAAGCAGCACGTTGGTGCACGACA GCCTGGGCCGTACCACGGCCTACCACTTCGAAGGCGAAGGCGGCCTCAAGCGCCTGGTGCGTCTCGTGGCCCCGGATGGG ACCGAACAGAGCTACCGCCACGACAGCGCCGGCCGTCGCCTCTCGGCCACCGATGCGCTGGGCCGCACGACGTGGTGGCG CTACGACGGCGCGGGCCGGCTGCTGGGTGTGCAGGGCCCGGACGGGCGCAGCACGCAACAGCACTGGGGCGCGGCGGGCA GCGCGCAGGACGGCTTGCTGTTGGCCAGCCAGGACGCGGCGGGGCTGCGCACGCACTTCCGCTACGACGACTGGGGCCGG CTGGTGGAGGTGGCGATGGCACCAGCCGGGAGCGGGGACGGAGCCACGAACACCCAGGTCCTCACCACCCGCTTCGAATA CGAACAACCCCGGCAGGATGCCGCCACCAGCACAACTGCCGGCAACATCGCCTTCCCACCGCACACGCTCGCCTGGTGGG ACCAGCCCGTGGCGATGATCGACGCGCAGGGCGGGCGTAGCCTCTACGCCTACAACGCCTGCGGCCAGCTCGCGCGGCAC ATCGACTGCTCCGGCCGCAGCCAGTCCTGGCGCCACGGCGCCTGGGGCGAGGTGCTGGAGGCGACGGACGCGCTGGGCCA GCGCACCCAGCTGCACCACGTGCTGGAGCATGGCGCGCTGCGGCTGGTGGGCGTGCAGCAGCCGGGCAACACGGCGGTGC GCCACCGCTGGTCGGCCGCCGGCACGCTGGAGGCGACCACCTACGGCGCGCACGACGTGCTGGAAGGCACGGGCGAGCCC GCGGGCACCAGCACGACAGTCACCTACCGCCACGACCTCTGGGGCCGGGTGGTGGAGCAGGTGCAGGCGGGCCGGGGCGT GCAGCTGCGCTACGACGTGGCCGGGCGGCTGCAGGAACTCGTCAACGAGAACGGCGATGTCACACGCTTCGTGCACGACG CGGCCGACCGGCTGGTGCAGGAAGTGGGCTTCGATGGGCGCAGCCAGGTGTATGGCTACGACGCGGCCGGCCAGCTCACG CACACGGGCGACGGGCATGGCGAAGGCCACCACCCGGGAGCGGCGGCGCGGCCGGAACTCGGGGCGGTGGTGCGCACGCG GCTGCACTACGACCTGGGCGGCCGGCTGGTGGCGCGTGTGGCCGTACGGCTGCCGGCAGCGGCATTGGCCGGTGTTGGCG TCAGCGTCGCAGGTGATGCGCCCGACAACCCCACGGCTGAACCGCATGCCGTGCTGCAGATCCAGCGCTTCGGGCACACC GCGGCCGGAGCCCTGCTGCAGGCGCGGACCTGGGAGACAGAACTGCCCCACGGGATCGAGCCCATGGCCCTGCCAACGGC CCTGTCTCCCGACTCCTCGCGCCCAGGCGCTGCCACGGACCGACCCATCCCCCTCGCCGAGCGCTGGCTGGCACTGGACA CGCAGGCACTGTTGTCCCTGCTGGACCGCCCCAGCGATCCGACCCAGGCCCCGCTGGCAGCCGCGCTGCAGGCGCAGCGG CTGCAGCCCGAGGCCCGCGTGGCCCTGGCGCGCGATGCCTTCGGGCGTGTCTGTGGAGAGACCCAGACGCTGTACCGGCA GGCCACCCAGCCGCAAGCGCCCCATGCCGGCGGCGAGCCGCCCGTGGAGTTCGAGCACGCGATCACCCACACGCTGGGCC CGCTGGGCCAGCGCACGGCCACTCAGGCGCAGGGCCTGGGCACGCTGCAGTGGCTGGCCTACGGCTCGGGCCATGTGCAC GGGCTGCTGCTGGACGGCCAGCCGCTGGTGGACTGGGAGCGCGATGCGCTGCACCGCGAGGTGGGGCGTACGCTGCACGT GCTCGAAGGCAAAGACAACGAAGACCTGCACGCCATCGTGCATGCGCGGCAGCTCGACCCGATGGGCCGCATGCTGCACC AGGACTGGCGCGGCCTGCGCCATGCGACGCCGGTGGTTCCTGCCGACCCGGCCAACGCCTTCGGAACGGGTCCTTCGTCC GCCGCGGGCCGCATCGCCCCGGCCCTGGGCCCGCTGTCCACGCTCGCGCAGCGCCGCTACTGGTACGACCCGCTGGGCCA ACTGGTCGGCGTGCAGACCCCGGGCGAAGCCACGCGCTACGGCTACGACGCCTGGCAGCGCCTGAGCGGGCTGCACCGCG CGGGCCAGGGTACGCCGGAAGTGCAAGCGCACTGGGCGCTGGACGCGGCGGGCAACCGCCTGCCCGCGTCCCTGGATGCG CGCGCGGCCGGGTCTTCTGCGAGCGAGCGCCAGGGCTGGGCACGGCAGGTGCGCGAGAACCTGCACGATGCGGACTTCGA CCTGCTGCGCGCGGGCGACGGGCCCGGCGAAGGTGCAGGCCCGGTCACGCGCTGGCCGGGCAACCGCATCGGGTGGAGCA CCCCCGAACCGGATGCCGATGGCACCAGCATCGCTGGCAGCGACGGCAACGGCAACGGCAACGGCAACGGCAACGGCAAC GGCAACGGCAACGGCAACGGCAACGGCATCCTGATCCGCTACCGCTACGACGCCTTCGGCAACCGGGTGCAGGCGCTGCA CGCCGACGGCCGGGCGCAGCGGCTGCGCTACGACGCGCTGCACCAATTGCGCGAGGTCTGGCAGCGCGAGGCAGCGGGTG GCGCCTGGCAGCGGGTGGCCTGCTACCGCTACGACCCCTTCGGGCGGCGGCTGGCCAAGACCGTCTTCGGCAACGGTAAC GACAACGGCGGCAGCAGCGAGCGGGTAGCTGCATCGGGCGTCGCGACCGCCACCTACGCCGGCTGGGACGGTGACCGCCT CGTGCACAACGAAGGCCCCCAGGGGCTGCAGCACGTGCTCTACGAACCCGGCTCCTTTGCGCCGCTGCTGCGCCTGGAGC GTGAGCAGGCCATTCCCACGGCCTTGCAGGCCATGCTTTCCATGGAGGAAGACCAAGCTCGCATGGGGCTAAATAGCCAG GAAAGCGGCCTATCACCTGCCGCAGCCCTGTTCGCTGGCTTGCCCCGTGCGCAACGCGAACTGCTGGAGGGCGCCCTACA CGACGCTATCGGGCCCCACGGCAACGCTCTACAGGCGCGACTGCAGGCAAGTCTGCCCGAAGAGGCCGGCGCATTGTTGA TTGCGGGCCTGCAATCCGTGCGCCAGCAACAGCAGGCTGCCACTCAGGCCCATCCCACGCGCATCCGCCATTTCCTTTGC GACCACCTGGGCACGCCGATCGCCCTGGTGGATGCCAACGGCCCGCAGGCGGGCTTGGTGACCTGGGCTGCGACCTACCA TGCCTGGGGTGCTGTGCGCGAGGAATACGACCCGCACGGCATCAATCAGCCCATCCGCTTCCAGGGCCAGCAGCTTGATG CCGAGACGGGGCTGCACTACAACCGGTTCCGTTATTACGACCCGATCCTGGGTCAGTATGTGACGCAGGATCCAATCGGA CTGGTGGGCGGGAGTCACTCTTACGCCTACGTTGGAAATGATCCGTTGAACTGGGTTGATCCGCGTGGCTTGGAACCGGG CTCGATGGCTCAAAGAGGGTACCTGGACAACAACCGTCCGAGCTACCCAGGACTATTAGGGCAGGACGAAAATGGCGTGC TGTTGTTTGATGAAAAGAGCCCAAATTTTCATAGCTACAACGTTAGTAATTCATGTCAAAAAAATACCCCTGGCTGCACG TTTGGTAATGTTGCTGAGGGGCTTATGAGATACCCCGCTCCAGGCGCGAGTGGAGAGCCTATTGCAAATAAACAAAGTGG TTTTGCTTTTCCCGTGGGGCCTGTAACTCACGTGGTGTCACCCGATAGGTCAATGGTCACTAATATCACCGAGAAAAGCC ACCTACTATATCCCGGTATTGTACGACGCTGGGTTTCGGAAAGTGCCAATGAAGTTACTGTACACACATATGGCGAGGGC GTGGGGCCGATGGGTAAGATGAATAATGCGCTTGCGGACTGGCTCTGGGGTAAAGTGGATAAAGATGTTTTTAAATATGC GGAATCATGCAAGTAA
Upstream 100 bases:
>100_bases GAGAGCCACAGGTACTGCTTGCTTGAAGGAGCGCAGTGCCTTGGCCCCGTGGGCGCCACGACGAAGAACAAATAAATAAG CAAGCAAGGGGAACCAGAAA
Downstream 100 bases:
>100_bases AGAGTTATATTTTTAGTAGCTTCCTCTCCTCTTTATTATTGGCGAGCATTTTTGTTTTTTTTTCCGATAGGGGCTATCGC GGTGTATATTGGTTTATATG
Product: YD repeat-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 1791; Mature: 1790
Protein sequence:
>1791_residues MSGKPAARQGDLTKKGGPIVQGSATVLIGSAGGVACSVCPGGMAVGNPVNPALGAKVLTGGDELDFALPGPLPLAWQRVY SSYVNAEHGAACGLLGYGWKLPLELRLRLQSDRVVLFDASGRAITFEEALLPGQALYSSSEDLWLLRGGGMTDVHSHAIA SSKDTNSSSTRTSTPAELLPWAQQPRWSHVPAVLRADPGCVIAVPGAGGAGAPVWVFLTAGVSGDGTASGHVLHAVIDRF GRSQRYQWGTEGEQQGRVAGITDGSGRRYALRYERIAQDAGTAQTSAHPLLQPDDGVRLVGVDCTFSPLDPAVIPGAAPR PQPLVGYRYDSAGNLAEVLGADGTVLRRFGYDALHRMTEHQVRQGPQHRYVYEDQTAQGRRQGWAARPGARVAEQHNEEG LSYFFEYSQASAQPAPSTHTTQATQGPEDDQDGPTPATASLPSNRQSSTLVHDSLGRTTAYHFEGEGGLKRLVRLVAPDG TEQSYRHDSAGRRLSATDALGRTTWWRYDGAGRLLGVQGPDGRSTQQHWGAAGSAQDGLLLASQDAAGLRTHFRYDDWGR LVEVAMAPAGSGDGATNTQVLTTRFEYEQPRQDAATSTTAGNIAFPPHTLAWWDQPVAMIDAQGGRSLYAYNACGQLARH IDCSGRSQSWRHGAWGEVLEATDALGQRTQLHHVLEHGALRLVGVQQPGNTAVRHRWSAAGTLEATTYGAHDVLEGTGEP AGTSTTVTYRHDLWGRVVEQVQAGRGVQLRYDVAGRLQELVNENGDVTRFVHDAADRLVQEVGFDGRSQVYGYDAAGQLT HTGDGHGEGHHPGAAARPELGAVVRTRLHYDLGGRLVARVAVRLPAAALAGVGVSVAGDAPDNPTAEPHAVLQIQRFGHT AAGALLQARTWETELPHGIEPMALPTALSPDSSRPGAATDRPIPLAERWLALDTQALLSLLDRPSDPTQAPLAAALQAQR LQPEARVALARDAFGRVCGETQTLYRQATQPQAPHAGGEPPVEFEHAITHTLGPLGQRTATQAQGLGTLQWLAYGSGHVH GLLLDGQPLVDWERDALHREVGRTLHVLEGKDNEDLHAIVHARQLDPMGRMLHQDWRGLRHATPVVPADPANAFGTGPSS AAGRIAPALGPLSTLAQRRYWYDPLGQLVGVQTPGEATRYGYDAWQRLSGLHRAGQGTPEVQAHWALDAAGNRLPASLDA RAAGSSASERQGWARQVRENLHDADFDLLRAGDGPGEGAGPVTRWPGNRIGWSTPEPDADGTSIAGSDGNGNGNGNGNGN GNGNGNGNGILIRYRYDAFGNRVQALHADGRAQRLRYDALHQLREVWQREAAGGAWQRVACYRYDPFGRRLAKTVFGNGN DNGGSSERVAASGVATATYAGWDGDRLVHNEGPQGLQHVLYEPGSFAPLLRLEREQAIPTALQAMLSMEEDQARMGLNSQ ESGLSPAAALFAGLPRAQRELLEGALHDAIGPHGNALQARLQASLPEEAGALLIAGLQSVRQQQQAATQAHPTRIRHFLC DHLGTPIALVDANGPQAGLVTWAATYHAWGAVREEYDPHGINQPIRFQGQQLDAETGLHYNRFRYYDPILGQYVTQDPIG LVGGSHSYAYVGNDPLNWVDPRGLEPGSMAQRGYLDNNRPSYPGLLGQDENGVLLFDEKSPNFHSYNVSNSCQKNTPGCT FGNVAEGLMRYPAPGASGEPIANKQSGFAFPVGPVTHVVSPDRSMVTNITEKSHLLYPGIVRRWVSESANEVTVHTYGEG VGPMGKMNNALADWLWGKVDKDVFKYAESCK
Sequences:
>Translated_1791_residues MSGKPAARQGDLTKKGGPIVQGSATVLIGSAGGVACSVCPGGMAVGNPVNPALGAKVLTGGDELDFALPGPLPLAWQRVY SSYVNAEHGAACGLLGYGWKLPLELRLRLQSDRVVLFDASGRAITFEEALLPGQALYSSSEDLWLLRGGGMTDVHSHAIA SSKDTNSSSTRTSTPAELLPWAQQPRWSHVPAVLRADPGCVIAVPGAGGAGAPVWVFLTAGVSGDGTASGHVLHAVIDRF GRSQRYQWGTEGEQQGRVAGITDGSGRRYALRYERIAQDAGTAQTSAHPLLQPDDGVRLVGVDCTFSPLDPAVIPGAAPR PQPLVGYRYDSAGNLAEVLGADGTVLRRFGYDALHRMTEHQVRQGPQHRYVYEDQTAQGRRQGWAARPGARVAEQHNEEG LSYFFEYSQASAQPAPSTHTTQATQGPEDDQDGPTPATASLPSNRQSSTLVHDSLGRTTAYHFEGEGGLKRLVRLVAPDG TEQSYRHDSAGRRLSATDALGRTTWWRYDGAGRLLGVQGPDGRSTQQHWGAAGSAQDGLLLASQDAAGLRTHFRYDDWGR LVEVAMAPAGSGDGATNTQVLTTRFEYEQPRQDAATSTTAGNIAFPPHTLAWWDQPVAMIDAQGGRSLYAYNACGQLARH IDCSGRSQSWRHGAWGEVLEATDALGQRTQLHHVLEHGALRLVGVQQPGNTAVRHRWSAAGTLEATTYGAHDVLEGTGEP AGTSTTVTYRHDLWGRVVEQVQAGRGVQLRYDVAGRLQELVNENGDVTRFVHDAADRLVQEVGFDGRSQVYGYDAAGQLT HTGDGHGEGHHPGAAARPELGAVVRTRLHYDLGGRLVARVAVRLPAAALAGVGVSVAGDAPDNPTAEPHAVLQIQRFGHT AAGALLQARTWETELPHGIEPMALPTALSPDSSRPGAATDRPIPLAERWLALDTQALLSLLDRPSDPTQAPLAAALQAQR LQPEARVALARDAFGRVCGETQTLYRQATQPQAPHAGGEPPVEFEHAITHTLGPLGQRTATQAQGLGTLQWLAYGSGHVH GLLLDGQPLVDWERDALHREVGRTLHVLEGKDNEDLHAIVHARQLDPMGRMLHQDWRGLRHATPVVPADPANAFGTGPSS AAGRIAPALGPLSTLAQRRYWYDPLGQLVGVQTPGEATRYGYDAWQRLSGLHRAGQGTPEVQAHWALDAAGNRLPASLDA RAAGSSASERQGWARQVRENLHDADFDLLRAGDGPGEGAGPVTRWPGNRIGWSTPEPDADGTSIAGSDGNGNGNGNGNGN GNGNGNGNGILIRYRYDAFGNRVQALHADGRAQRLRYDALHQLREVWQREAAGGAWQRVACYRYDPFGRRLAKTVFGNGN DNGGSSERVAASGVATATYAGWDGDRLVHNEGPQGLQHVLYEPGSFAPLLRLEREQAIPTALQAMLSMEEDQARMGLNSQ ESGLSPAAALFAGLPRAQRELLEGALHDAIGPHGNALQARLQASLPEEAGALLIAGLQSVRQQQQAATQAHPTRIRHFLC DHLGTPIALVDANGPQAGLVTWAATYHAWGAVREEYDPHGINQPIRFQGQQLDAETGLHYNRFRYYDPILGQYVTQDPIG LVGGSHSYAYVGNDPLNWVDPRGLEPGSMAQRGYLDNNRPSYPGLLGQDENGVLLFDEKSPNFHSYNVSNSCQKNTPGCT FGNVAEGLMRYPAPGASGEPIANKQSGFAFPVGPVTHVVSPDRSMVTNITEKSHLLYPGIVRRWVSESANEVTVHTYGEG VGPMGKMNNALADWLWGKVDKDVFKYAESCK >Mature_1790_residues SGKPAARQGDLTKKGGPIVQGSATVLIGSAGGVACSVCPGGMAVGNPVNPALGAKVLTGGDELDFALPGPLPLAWQRVYS SYVNAEHGAACGLLGYGWKLPLELRLRLQSDRVVLFDASGRAITFEEALLPGQALYSSSEDLWLLRGGGMTDVHSHAIAS SKDTNSSSTRTSTPAELLPWAQQPRWSHVPAVLRADPGCVIAVPGAGGAGAPVWVFLTAGVSGDGTASGHVLHAVIDRFG RSQRYQWGTEGEQQGRVAGITDGSGRRYALRYERIAQDAGTAQTSAHPLLQPDDGVRLVGVDCTFSPLDPAVIPGAAPRP QPLVGYRYDSAGNLAEVLGADGTVLRRFGYDALHRMTEHQVRQGPQHRYVYEDQTAQGRRQGWAARPGARVAEQHNEEGL SYFFEYSQASAQPAPSTHTTQATQGPEDDQDGPTPATASLPSNRQSSTLVHDSLGRTTAYHFEGEGGLKRLVRLVAPDGT EQSYRHDSAGRRLSATDALGRTTWWRYDGAGRLLGVQGPDGRSTQQHWGAAGSAQDGLLLASQDAAGLRTHFRYDDWGRL VEVAMAPAGSGDGATNTQVLTTRFEYEQPRQDAATSTTAGNIAFPPHTLAWWDQPVAMIDAQGGRSLYAYNACGQLARHI DCSGRSQSWRHGAWGEVLEATDALGQRTQLHHVLEHGALRLVGVQQPGNTAVRHRWSAAGTLEATTYGAHDVLEGTGEPA GTSTTVTYRHDLWGRVVEQVQAGRGVQLRYDVAGRLQELVNENGDVTRFVHDAADRLVQEVGFDGRSQVYGYDAAGQLTH TGDGHGEGHHPGAAARPELGAVVRTRLHYDLGGRLVARVAVRLPAAALAGVGVSVAGDAPDNPTAEPHAVLQIQRFGHTA AGALLQARTWETELPHGIEPMALPTALSPDSSRPGAATDRPIPLAERWLALDTQALLSLLDRPSDPTQAPLAAALQAQRL QPEARVALARDAFGRVCGETQTLYRQATQPQAPHAGGEPPVEFEHAITHTLGPLGQRTATQAQGLGTLQWLAYGSGHVHG LLLDGQPLVDWERDALHREVGRTLHVLEGKDNEDLHAIVHARQLDPMGRMLHQDWRGLRHATPVVPADPANAFGTGPSSA AGRIAPALGPLSTLAQRRYWYDPLGQLVGVQTPGEATRYGYDAWQRLSGLHRAGQGTPEVQAHWALDAAGNRLPASLDAR AAGSSASERQGWARQVRENLHDADFDLLRAGDGPGEGAGPVTRWPGNRIGWSTPEPDADGTSIAGSDGNGNGNGNGNGNG NGNGNGNGILIRYRYDAFGNRVQALHADGRAQRLRYDALHQLREVWQREAAGGAWQRVACYRYDPFGRRLAKTVFGNGND NGGSSERVAASGVATATYAGWDGDRLVHNEGPQGLQHVLYEPGSFAPLLRLEREQAIPTALQAMLSMEEDQARMGLNSQE SGLSPAAALFAGLPRAQRELLEGALHDAIGPHGNALQARLQASLPEEAGALLIAGLQSVRQQQQAATQAHPTRIRHFLCD HLGTPIALVDANGPQAGLVTWAATYHAWGAVREEYDPHGINQPIRFQGQQLDAETGLHYNRFRYYDPILGQYVTQDPIGL VGGSHSYAYVGNDPLNWVDPRGLEPGSMAQRGYLDNNRPSYPGLLGQDENGVLLFDEKSPNFHSYNVSNSCQKNTPGCTF GNVAEGLMRYPAPGASGEPIANKQSGFAFPVGPVTHVVSPDRSMVTNITEKSHLLYPGIVRRWVSESANEVTVHTYGEGV GPMGKMNNALADWLWGKVDKDVFKYAESCK
Specific function: Rhs elements have a nonessential function. They may play an important role in the natural ecology of the cell [H]
COG id: COG3209
COG function: function code M; Rhs family protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the RHS family [H]
Homologues:
Organism=Escherichia coli, GI1786706, Length=834, Percent_Identity=34.4124700239808, Blast_Score=361, Evalue=1e-100, Organism=Escherichia coli, GI1786917, Length=867, Percent_Identity=32.9873125720877, Blast_Score=349, Evalue=1e-96, Organism=Escherichia coli, GI48994942, Length=874, Percent_Identity=32.7231121281465, Blast_Score=343, Evalue=6e-95, Organism=Escherichia coli, GI1790020, Length=874, Percent_Identity=32.7231121281465, Blast_Score=343, Evalue=6e-95,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001826 - InterPro: IPR022385 - InterPro: IPR006530 [H]
Pfam domain/function: PF03527 RHS; PF05593 RHS_repeat [H]
EC number: NA
Molecular weight: Translated: 191691; Mature: 191559
Theoretical pI: Translated: 6.56; Mature: 6.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGKPAARQGDLTKKGGPIVQGSATVLIGSAGGVACSVCPGGMAVGNPVNPALGAKVLTG CCCCCCCCCCCCCCCCCCEEECCCEEEEECCCCCEEEECCCCCCCCCCCCHHHCCEEEEC GDELDFALPGPLPLAWQRVYSSYVNAEHGAACGLLGYGWKLPLELRLRLQSDRVVLFDAS CCCCCEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEEEECCCEEEEEECC GRAITFEEALLPGQALYSSSEDLWLLRGGGMTDVHSHAIASSKDTNSSSTRTSTPAELLP CCEEEHHHHHCCCHHHHCCCCCEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHCC WAQQPRWSHVPAVLRADPGCVIAVPGAGGAGAPVWVFLTAGVSGDGTASGHVLHAVIDRF CCCCCCCCCCCCCEECCCCEEEEECCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHH GRSQRYQWGTEGEQQGRVAGITDGSGRRYALRYERIAQDAGTAQTSAHPLLQPDDGVRLV CCCCCCCCCCCCCCCCCEEEEECCCCCEEEHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE GVDCTFSPLDPAVIPGAAPRPQPLVGYRYDSAGNLAEVLGADGTVLRRFGYDALHRMTEH EECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHCCCCHHHHHCCHHHHHHHHHH QVRQGPQHRYVYEDQTAQGRRQGWAARPGARVAEQHNEEGLSYFFEYSQASAQPAPSTHT HHHCCCCCCEEECCCCHHHHHCCCCCCCCHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCC TQATQGPEDDQDGPTPATASLPSNRQSSTLVHDSLGRTTAYHFEGEGGLKRLVRLVAPDG CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCEEEEECCCHHHHHHHHHHCCCC TEQSYRHDSAGRRLSATDALGRTTWWRYDGAGRLLGVQGPDGRSTQQHWGAAGSAQDGLL CCHHHHHHHCCCEEEHHHHHCCCEEEEECCCCCEEEECCCCCCCHHHHCCCCCCCCCCEE LASQDAAGLRTHFRYDDWGRLVEVAMAPAGSGDGATNTQVLTTRFEYEQPRQDAATSTTA EECCCCCCHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCHHHHCCCCCC GNIAFPPHTLAWWDQPVAMIDAQGGRSLYAYNACGQLARHIDCSGRSQSWRHGAWGEVLE CCCCCCCCCHHHCCCCEEEEECCCCCEEEEEHHHHHHHHHCCCCCCCCCCCCCCHHHHHH ATDALGQRTQLHHVLEHGALRLVGVQQPGNTAVRHRWSAAGTLEATTYGAHDVLEGTGEP HHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHEECCCCCCEEEECCCCHHHHCCCCCC AGTSTTVTYRHDLWGRVVEQVQAGRGVQLRYDVAGRLQELVNENGDVTRFVHDAADRLVQ CCCCEEEEEHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHH EVGFDGRSQVYGYDAAGQLTHTGDGHGEGHHPGAAARPELGAVVRTRLHYDLGGRLVARV HHCCCCCCEEEEECCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHH AVRLPAAALAGVGVSVAGDAPDNPTAEPHAVLQIQRFGHTAAGALLQARTWETELPHGIE HHHCCHHHHHCCCEEEECCCCCCCCCCCHHEEEEHHHCCHHHHHHHHHCCCCCCCCCCCC PMALPTALSPDSSRPGAATDRPIPLAERWLALDTQALLSLLDRPSDPTQAPLAAALQAQR CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCHHHHHHHHCCCCCCCHHHHHHHHHHHH LQPEARVALARDAFGRVCGETQTLYRQATQPQAPHAGGEPPVEFEHAITHTLGPLGQRTA CCCHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHH TQAQGLGTLQWLAYGSGHVHGLLLDGQPLVDWERDALHREVGRTLHVLEGKDNEDLHAIV HHHCCCCEEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHCCEEEEECCCCCCCHHHHH HARQLDPMGRMLHQDWRGLRHATPVVPADPANAFGTGPSSAAGRIAPALGPLSTLAQRRY HHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH WYDPLGQLVGVQTPGEATRYGYDAWQRLSGLHRAGQGTPEVQAHWALDAAGNRLPASLDA HHCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCC RAAGSSASERQGWARQVRENLHDADFDLLRAGDGPGEGAGPVTRWPGNRIGWSTPEPDAD CCCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GTSIAGSDGNGNGNGNGNGNGNGNGNGNGILIRYRYDAFGNRVQALHADGRAQRLRYDAL CCEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEECCCHHHHHHHHHH HQLREVWQREAAGGAWQRVACYRYDPFGRRLAKTVFGNGNDNGGSSERVAASGVATATYA HHHHHHHHHHHCCCHHHEEEEEEECHHHHHHHHHHCCCCCCCCCCCCCEECCCCCEEEEC GWDGDRLVHNEGPQGLQHVLYEPGSFAPLLRLEREQAIPTALQAMLSMEEDQARMGLNSQ CCCCCEEECCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCC ESGLSPAAALFAGLPRAQRELLEGALHDAIGPHGNALQARLQASLPEEAGALLIAGLQSV CCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHCHHHHHHHHHH RQQQQAATQAHPTRIRHFLCDHLGTPIALVDANGPQAGLVTWAATYHAWGAVREEYDPHG HHHHHHHHHCCHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEHHHHHHHHHHHHCCCCCC INQPIRFQGQQLDAETGLHYNRFRYYDPILGQYVTQDPIGLVGGSHSYAYVGNDPLNWVD CCCCCEECCCEECHHCCCCCCCEECCCHHHHHHHCCCCCEEECCCCCEEEECCCCCCCCC PRGLEPGSMAQRGYLDNNRPSYPGLLGQDENGVLLFDEKSPNFHSYNVSNSCQKNTPGCT CCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEECCCCCCCCCCCCCC FGNVAEGLMRYPAPGASGEPIANKQSGFAFPVGPVTHVVSPDRSMVTNITEKSHLLYPGI HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHEECCCCHHHHHHHHHCCCEECHHH VRRWVSESANEVTVHTYGEGVGPMGKMNNALADWLWGKVDKDVFKYAESCK HHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCC >Mature Secondary Structure SGKPAARQGDLTKKGGPIVQGSATVLIGSAGGVACSVCPGGMAVGNPVNPALGAKVLTG CCCCCCCCCCCCCCCCCEEECCCEEEEECCCCCEEEECCCCCCCCCCCCHHHCCEEEEC GDELDFALPGPLPLAWQRVYSSYVNAEHGAACGLLGYGWKLPLELRLRLQSDRVVLFDAS CCCCCEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEEEECCCEEEEEECC GRAITFEEALLPGQALYSSSEDLWLLRGGGMTDVHSHAIASSKDTNSSSTRTSTPAELLP CCEEEHHHHHCCCHHHHCCCCCEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHCC WAQQPRWSHVPAVLRADPGCVIAVPGAGGAGAPVWVFLTAGVSGDGTASGHVLHAVIDRF CCCCCCCCCCCCCEECCCCEEEEECCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHH GRSQRYQWGTEGEQQGRVAGITDGSGRRYALRYERIAQDAGTAQTSAHPLLQPDDGVRLV CCCCCCCCCCCCCCCCCEEEEECCCCCEEEHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE GVDCTFSPLDPAVIPGAAPRPQPLVGYRYDSAGNLAEVLGADGTVLRRFGYDALHRMTEH EECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHCCCCHHHHHCCHHHHHHHHHH QVRQGPQHRYVYEDQTAQGRRQGWAARPGARVAEQHNEEGLSYFFEYSQASAQPAPSTHT HHHCCCCCCEEECCCCHHHHHCCCCCCCCHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCC TQATQGPEDDQDGPTPATASLPSNRQSSTLVHDSLGRTTAYHFEGEGGLKRLVRLVAPDG CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCEEEEECCCHHHHHHHHHHCCCC TEQSYRHDSAGRRLSATDALGRTTWWRYDGAGRLLGVQGPDGRSTQQHWGAAGSAQDGLL CCHHHHHHHCCCEEEHHHHHCCCEEEEECCCCCEEEECCCCCCCHHHHCCCCCCCCCCEE LASQDAAGLRTHFRYDDWGRLVEVAMAPAGSGDGATNTQVLTTRFEYEQPRQDAATSTTA EECCCCCCHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCHHHHCCCCCC GNIAFPPHTLAWWDQPVAMIDAQGGRSLYAYNACGQLARHIDCSGRSQSWRHGAWGEVLE CCCCCCCCCHHHCCCCEEEEECCCCCEEEEEHHHHHHHHHCCCCCCCCCCCCCCHHHHHH ATDALGQRTQLHHVLEHGALRLVGVQQPGNTAVRHRWSAAGTLEATTYGAHDVLEGTGEP HHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHEECCCCCCEEEECCCCHHHHCCCCCC AGTSTTVTYRHDLWGRVVEQVQAGRGVQLRYDVAGRLQELVNENGDVTRFVHDAADRLVQ CCCCEEEEEHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHH EVGFDGRSQVYGYDAAGQLTHTGDGHGEGHHPGAAARPELGAVVRTRLHYDLGGRLVARV HHCCCCCCEEEEECCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHH AVRLPAAALAGVGVSVAGDAPDNPTAEPHAVLQIQRFGHTAAGALLQARTWETELPHGIE HHHCCHHHHHCCCEEEECCCCCCCCCCCHHEEEEHHHCCHHHHHHHHHCCCCCCCCCCCC PMALPTALSPDSSRPGAATDRPIPLAERWLALDTQALLSLLDRPSDPTQAPLAAALQAQR CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCHHHHHHHHCCCCCCCHHHHHHHHHHHH LQPEARVALARDAFGRVCGETQTLYRQATQPQAPHAGGEPPVEFEHAITHTLGPLGQRTA CCCHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHH TQAQGLGTLQWLAYGSGHVHGLLLDGQPLVDWERDALHREVGRTLHVLEGKDNEDLHAIV HHHCCCCEEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHCCEEEEECCCCCCCHHHHH HARQLDPMGRMLHQDWRGLRHATPVVPADPANAFGTGPSSAAGRIAPALGPLSTLAQRRY HHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH WYDPLGQLVGVQTPGEATRYGYDAWQRLSGLHRAGQGTPEVQAHWALDAAGNRLPASLDA HHCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCC RAAGSSASERQGWARQVRENLHDADFDLLRAGDGPGEGAGPVTRWPGNRIGWSTPEPDAD CCCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GTSIAGSDGNGNGNGNGNGNGNGNGNGNGILIRYRYDAFGNRVQALHADGRAQRLRYDAL CCEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEECCCHHHHHHHHHH HQLREVWQREAAGGAWQRVACYRYDPFGRRLAKTVFGNGNDNGGSSERVAASGVATATYA HHHHHHHHHHHCCCHHHEEEEEEECHHHHHHHHHHCCCCCCCCCCCCCEECCCCCEEEEC GWDGDRLVHNEGPQGLQHVLYEPGSFAPLLRLEREQAIPTALQAMLSMEEDQARMGLNSQ CCCCCEEECCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCC ESGLSPAAALFAGLPRAQRELLEGALHDAIGPHGNALQARLQASLPEEAGALLIAGLQSV CCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHCHHHHHHHHHH RQQQQAATQAHPTRIRHFLCDHLGTPIALVDANGPQAGLVTWAATYHAWGAVREEYDPHG HHHHHHHHHCCHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEHHHHHHHHHHHHCCCCCC INQPIRFQGQQLDAETGLHYNRFRYYDPILGQYVTQDPIGLVGGSHSYAYVGNDPLNWVD CCCCCEECCCEECHHCCCCCCCEECCCHHHHHHHCCCCCEEECCCCCEEEECCCCCCCCC PRGLEPGSMAQRGYLDNNRPSYPGLLGQDENGVLLFDEKSPNFHSYNVSNSCQKNTPGCT CCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEECCCCCCCCCCCCCC FGNVAEGLMRYPAPGASGEPIANKQSGFAFPVGPVTHVVSPDRSMVTNITEKSHLLYPGI HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHEECCCCHHHHHHHHHCCCEECHHH VRRWVSESANEVTVHTYGEGVGPMGKMNNALADWLWGKVDKDVFKYAESCK HHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1766878; 9278503; 2644231; 2403547; 7934896 [H]