Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

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The map label for this gene is gsiC [H]

Identifier: 120612639

GI number: 120612639

Start: 4441129

End: 4442139

Strand: Direct

Name: gsiC [H]

Synonym: Aave_4002

Alternate gene names: 120612639

Gene position: 4441129-4442139 (Clockwise)

Preceding gene: 120612638

Following gene: 120612640

Centisome position: 82.97

GC content: 73.49

Gene sequence:

>1011_bases
ATGACCACCCGTACATCCCCCATGCCTTCTTCCTCCAGTTCCTCCTCCACCGCCGCCGAACGCATCTGGGCCCGCATGCT
GCTGCGCCGGGCGCTGCAGGCCGTGGCGCTCGCGCTCATCGTCGGCACGCTGTGCTTCGCGATGGCCCGCACGCTGCCGG
GCGACATGGCCACGCGCATCGCCGCCGGACGCTACGGCTACGACCTCGTGTCGAATGCCGCGGCCGCGGCGGTGCGCGGC
GAACTGGGCCTGGACCGCCCTGTCTGGCAGGCGCTGCTGGCCTGGTGGGGCGACATCGTCCGGCTGGACCTGGGCACCTC
CTACGTCAGCGGCGATCCGGTGTGGCGGGAGATCGCGCACCCGCTGGCCGCCACGGTCGAACTGTCGCTCGCGGCGCTGC
TGATCGGCATGGCGCTGGGGCTGCCCGCCGGCATCTGGACGGGCCTGCATCCGGGCGGCCGCACCGACCGCGCCGTGGCC
GCGCTGTCCGTGCTGCTGCGGGCCATGCCGCCCTTCCTGCTCGCCGTGCTGCTGATGCTGGCGATGGCCGTGCACCTGGG
CATGCTGCCGGTGGCCGGCGATGACCATGCGGCCAGCCTGCTGCTGCCCGCGCTGACGCTGGGCCTGGGGCTCGCCGCGG
GCCTGGCGCGGGTGTCCGGCGCCGCCATGCGACAGGCCGCCGCGTCGCCTTCGCTGGCGTTCGCCCGCTCCAAGGGGCTC
ACCGACGGGCAGGCGCTGTGGCGCCACGGGCTGCCGCAGGCCGCGCTGCCGGTCGTGGCCTACCTCGGCGTGCAGGGCGT
GTTCCTGGTCGAGGGGGCCGTGGTCGTGGAAACGCTCTTCGCGTGGCCCGGCATCGGGCATGCGCTGGTGCATGCCGTCT
TCGGTCGCGACGTGCCGATGATCCAGGGCGCCGCCCTGTGCATGGGCCTGCTGTTCGTCTTCTTCAACCTGCTGGTGGAT
GCGGCCTGCGTGGCGATCGATCCCCGGCGTTCCACCGAGGTCCGCGCATGA

Upstream 100 bases:

>100_bases
CGTGGTACCGGCAGACCGTGGCCGCGAGCACGCGCGTCGGCCAGGTGCGGCTGGACCCGCTGGAGCGCTCCTACCGGCTC
ACCGCGATGGAGTGGCGCGC

Downstream 100 bases:

>100_bases
CCGCCGTGCCTTCGCCCCCCTCCGCACCGCCCGGCGCCTTCGACGCCGTCGCCCAGGCGCCGGTGCGTCCCGCCGCCCGC
GCAGGCCGCCGCTGGGGCCT

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 336; Mature: 335

Protein sequence:

>336_residues
MTTRTSPMPSSSSSSSTAAERIWARMLLRRALQAVALALIVGTLCFAMARTLPGDMATRIAAGRYGYDLVSNAAAAAVRG
ELGLDRPVWQALLAWWGDIVRLDLGTSYVSGDPVWREIAHPLAATVELSLAALLIGMALGLPAGIWTGLHPGGRTDRAVA
ALSVLLRAMPPFLLAVLLMLAMAVHLGMLPVAGDDHAASLLLPALTLGLGLAAGLARVSGAAMRQAAASPSLAFARSKGL
TDGQALWRHGLPQAALPVVAYLGVQGVFLVEGAVVVETLFAWPGIGHALVHAVFGRDVPMIQGAALCMGLLFVFFNLLVD
AACVAIDPRRSTEVRA

Sequences:

>Translated_336_residues
MTTRTSPMPSSSSSSSTAAERIWARMLLRRALQAVALALIVGTLCFAMARTLPGDMATRIAAGRYGYDLVSNAAAAAVRG
ELGLDRPVWQALLAWWGDIVRLDLGTSYVSGDPVWREIAHPLAATVELSLAALLIGMALGLPAGIWTGLHPGGRTDRAVA
ALSVLLRAMPPFLLAVLLMLAMAVHLGMLPVAGDDHAASLLLPALTLGLGLAAGLARVSGAAMRQAAASPSLAFARSKGL
TDGQALWRHGLPQAALPVVAYLGVQGVFLVEGAVVVETLFAWPGIGHALVHAVFGRDVPMIQGAALCMGLLFVFFNLLVD
AACVAIDPRRSTEVRA
>Mature_335_residues
TTRTSPMPSSSSSSSTAAERIWARMLLRRALQAVALALIVGTLCFAMARTLPGDMATRIAAGRYGYDLVSNAAAAAVRGE
LGLDRPVWQALLAWWGDIVRLDLGTSYVSGDPVWREIAHPLAATVELSLAALLIGMALGLPAGIWTGLHPGGRTDRAVAA
LSVLLRAMPPFLLAVLLMLAMAVHLGMLPVAGDDHAASLLLPALTLGLGLAAGLARVSGAAMRQAAASPSLAFARSKGLT
DGQALWRHGLPQAALPVVAYLGVQGVFLVEGAVVVETLFAWPGIGHALVHAVFGRDVPMIQGAALCMGLLFVFFNLLVDA
ACVAIDPRRSTEVRA

Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0601

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787053, Length=306, Percent_Identity=35.6209150326797, Blast_Score=167, Evalue=1e-42,
Organism=Escherichia coli, GI1789888, Length=310, Percent_Identity=35.8064516129032, Blast_Score=163, Evalue=1e-41,
Organism=Escherichia coli, GI1789965, Length=336, Percent_Identity=30.952380952381, Blast_Score=156, Evalue=2e-39,
Organism=Escherichia coli, GI1787497, Length=308, Percent_Identity=28.8961038961039, Blast_Score=129, Evalue=3e-31,
Organism=Escherichia coli, GI1787550, Length=277, Percent_Identity=25.2707581227437, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1787761, Length=326, Percent_Identity=31.2883435582822, Blast_Score=99, Evalue=4e-22,
Organism=Escherichia coli, GI1788504, Length=280, Percent_Identity=25.3571428571429, Blast_Score=97, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 35003; Mature: 34872

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTRTSPMPSSSSSSSTAAERIWARMLLRRALQAVALALIVGTLCFAMARTLPGDMATRI
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
AAGRYGYDLVSNAAAAAVRGELGLDRPVWQALLAWWGDIVRLDLGTSYVSGDPVWREIAH
HHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
PLAATVELSLAALLIGMALGLPAGIWTGLHPGGRTDRAVAALSVLLRAMPPFLLAVLLML
HHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHH
AMAVHLGMLPVAGDDHAASLLLPALTLGLGLAAGLARVSGAAMRQAAASPSLAFARSKGL
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCC
TDGQALWRHGLPQAALPVVAYLGVQGVFLVEGAVVVETLFAWPGIGHALVHAVFGRDVPM
CCHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCH
IQGAALCMGLLFVFFNLLVDAACVAIDPRRSTEVRA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
TTRTSPMPSSSSSSSTAAERIWARMLLRRALQAVALALIVGTLCFAMARTLPGDMATRI
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH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HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA