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The map label for this gene is oppC [H]

Identifier: 120612640

GI number: 120612640

Start: 4442136

End: 4442996

Strand: Direct

Name: oppC [H]

Synonym: Aave_4003

Alternate gene names: 120612640

Gene position: 4442136-4442996 (Clockwise)

Preceding gene: 120612639

Following gene: 120612641

Centisome position: 82.99

GC content: 77.35

Gene sequence:

>861_bases
ATGACCGCCGTGCCTTCGCCCCCCTCCGCACCGCCCGGCGCCTTCGACGCCGTCGCCCAGGCGCCGGTGCGTCCCGCCGC
CCGCGCAGGCCGCCGCTGGGGCCTCGTGGTCCTCGGCCTGCTCGCGGCCTTCGCGGCGCTGGGCCCCGCGCTGGTGGGCA
CCGATCCCGCACGGCAGTCGCTCGCCGACAGCCTGCTGCCGCCCGGCCGCGCGCACTGGCTGGGCACGGACCTGTTCGGC
CGCAGCACGCTGGCCCGTCTCGCCCATGCGGCGCAGCTCTCCCTGGGGCTGGCGCTGGCCGCATCGGCGAGCGCGGCGCT
TCCCGGCGTGCTGCTGGGCGTGGCGGCCAGCTGGCGCGGCGGCGCGCTCGACCGCTGGCTGGTGCTGCTCGCCGACGCCG
TGCTGGCGGTGCCGGGCCTGCTGCTGGTGCTGCTCTTCGCCACGCTCGCGCCGGGGCGGCACTGGGCGCTCTACCTGGGC
CTGTCGCTTTCGCTGTGGGTGGAGTATTTCCGCGTCAGCCGCGCGGCGAGCCGGCCGGTGCTGGCCGGCGACGCGGTGCA
GGCCTCGCGGCTGCTCGGCTTCGGGCCGGCCTACCTGCTGCGCCGCCATGTGCTGCCGGCGCTCGCGCCCGTGCTCGGCA
CGCTGCTGCCGTTCACCGCCGCCCAGGCCGTGCTGGCGCTCGCGGCGCTGGGCTTCATCGGCGTGGGAATCCAGCCGCCG
ACCGCCGAGCTGGGCCTGATGATGACCGAGGCGCTGCCGCATTACGAAGAAGCCCCCTGGCTGATCGCGGCCCCCGTGGG
CCTGCTGGCCTGGCTGGTGCTGGGCATGGCGCTCGTCGCGCGCCCCGGAGAGCCGGCATGA

Upstream 100 bases:

>100_bases
GCGCCGCCCTGTGCATGGGCCTGCTGTTCGTCTTCTTCAACCTGCTGGTGGATGCGGCCTGCGTGGCGATCGATCCCCGG
CGTTCCACCGAGGTCCGCGC

Downstream 100 bases:

>100_bases
GCGCGGCTGCCGCACTCCTGCAGGTGGACGACGTCGGCGTGCATGCGGGGCCGCTCGCGCTGCTGCAGGGCATCTCGTTC
ACGCTGCACCCCGGCGAGGC

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: Stage 0 sporulation protein KC [H]

Number of amino acids: Translated: 286; Mature: 285

Protein sequence:

>286_residues
MTAVPSPPSAPPGAFDAVAQAPVRPAARAGRRWGLVVLGLLAAFAALGPALVGTDPARQSLADSLLPPGRAHWLGTDLFG
RSTLARLAHAAQLSLGLALAASASAALPGVLLGVAASWRGGALDRWLVLLADAVLAVPGLLLVLLFATLAPGRHWALYLG
LSLSLWVEYFRVSRAASRPVLAGDAVQASRLLGFGPAYLLRRHVLPALAPVLGTLLPFTAAQAVLALAALGFIGVGIQPP
TAELGLMMTEALPHYEEAPWLIAAPVGLLAWLVLGMALVARPGEPA

Sequences:

>Translated_286_residues
MTAVPSPPSAPPGAFDAVAQAPVRPAARAGRRWGLVVLGLLAAFAALGPALVGTDPARQSLADSLLPPGRAHWLGTDLFG
RSTLARLAHAAQLSLGLALAASASAALPGVLLGVAASWRGGALDRWLVLLADAVLAVPGLLLVLLFATLAPGRHWALYLG
LSLSLWVEYFRVSRAASRPVLAGDAVQASRLLGFGPAYLLRRHVLPALAPVLGTLLPFTAAQAVLALAALGFIGVGIQPP
TAELGLMMTEALPHYEEAPWLIAAPVGLLAWLVLGMALVARPGEPA
>Mature_285_residues
TAVPSPPSAPPGAFDAVAQAPVRPAARAGRRWGLVVLGLLAAFAALGPALVGTDPARQSLADSLLPPGRAHWLGTDLFGR
STLARLAHAAQLSLGLALAASASAALPGVLLGVAASWRGGALDRWLVLLADAVLAVPGLLLVLLFATLAPGRHWALYLGL
SLSLWVEYFRVSRAASRPVLAGDAVQASRLLGFGPAYLLRRHVLPALAPVLGTLLPFTAAQAVLALAALGFIGVGIQPPT
AELGLMMTEALPHYEEAPWLIAAPVGLLAWLVLGMALVARPGEPA

Specific function: Part of the binding-protein-dependent transport system for oligopeptides; probably responsible for the translocation of the substrate across the membrane. Also required for sporulation and competence [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787760, Length=231, Percent_Identity=32.034632034632, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI1789889, Length=206, Percent_Identity=31.0679611650485, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI1788505, Length=195, Percent_Identity=28.7179487179487, Blast_Score=85, Evalue=6e-18,
Organism=Escherichia coli, GI1789964, Length=220, Percent_Identity=35.4545454545455, Blast_Score=82, Evalue=6e-17,
Organism=Escherichia coli, GI1787054, Length=193, Percent_Identity=29.0155440414508, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1787498, Length=238, Percent_Identity=25.2100840336134, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1787549, Length=215, Percent_Identity=31.6279069767442, Blast_Score=72, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 29337; Mature: 29206

Theoretical pI: Translated: 10.95; Mature: 10.95

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAVPSPPSAPPGAFDAVAQAPVRPAARAGRRWGLVVLGLLAAFAALGPALVGTDPARQS
CCCCCCCCCCCCCHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHCCHHHCCCHHHHH
LADSLLPPGRAHWLGTDLFGRSTLARLAHAAQLSLGLALAASASAALPGVLLGVAASWRG
HHHHCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GALDRWLVLLADAVLAVPGLLLVLLFATLAPGRHWALYLGLSLSLWVEYFRVSRAASRPV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCC
LAGDAVQASRLLGFGPAYLLRRHVLPALAPVLGTLLPFTAAQAVLALAALGFIGVGIQPP
CCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
TAELGLMMTEALPHYEEAPWLIAAPVGLLAWLVLGMALVARPGEPA
HHHHHHHHHHHCCCCCCCCEEEECHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TAVPSPPSAPPGAFDAVAQAPVRPAARAGRRWGLVVLGLLAAFAALGPALVGTDPARQS
CCCCCCCCCCCCHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHCCHHHCCCHHHHH
LADSLLPPGRAHWLGTDLFGRSTLARLAHAAQLSLGLALAASASAALPGVLLGVAASWRG
HHHHCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GALDRWLVLLADAVLAVPGLLLVLLFATLAPGRHWALYLGLSLSLWVEYFRVSRAASRPV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCC
LAGDAVQASRLLGFGPAYLLRRHVLPALAPVLGTLLPFTAAQAVLALAALGFIGVGIQPP
CCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
TAELGLMMTEALPHYEEAPWLIAAPVGLLAWLVLGMALVARPGEPA
HHHHHHHHHHHCCCCCCCCEEEECHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1901616; 1899858; 9384377 [H]