Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is fhuA [H]
Identifier: 120612638
GI number: 120612638
Start: 4437358
End: 4439526
Strand: Direct
Name: fhuA [H]
Synonym: Aave_4000
Alternate gene names: 120612638
Gene position: 4437358-4439526 (Clockwise)
Preceding gene: 120612637
Following gene: 120612639
Centisome position: 82.9
GC content: 71.42
Gene sequence:
>2169_bases ATGCCCCTTTTCCGTCACCCTTCTTTCAAGGCCCTGCCCCTCGCGATGGCCGCTGCGGCCCTCGTGGCAGGCGGCGCGCG CGCGCAATCCGGCCCCGCCCCGTCCCCTTCCGGCGACGCCCAGCTGTCCACCGTCGATGTCGTCGGCCGCACCGATTCCG GCACCTACCAGGCCCAGGAAGCCGCGGACGCCAAGACCGACCTGCCGCTGCGCGAGCTGCCGCAGTCCGTGCGCGTCATC ACCCGGCAGGCCATCGACGACCTCGGTGCCACGCGACTGGACGACGTGCTCGACTACGTGGGCGGGGTCTCGCGCCAGAA CAACTTCGGGGGCCTGTGGGACAACGTCGCCATCCGAGGCCTGCCCGGCAACGAGAACACCGGCTCGGCCACTCTGCTCA ACGGCTTCTCCGGCAACCGGGGCTTCAACGCGCCGCGCGACATGGCCGGCGTGGAGCGCATCGAATTCCTGAAGGGCCCG GCCGCCGCGCTCTACGGCAGCAGCGAACCCGGCGGCACGCTCAACATCGTCACCAAGCGGCCGAAATGGAAGCCCGCCAA CGCGGTGGAAGCCTATGCAGGCAGCCACGGCTATCGCCGCGGGGCACTCGACAGCACCGGTCCGCTGGGCGAGAACCTGG CCTACCGGCTCAACGTGGCGGTGGAAGACCGGGACAGCTTCCGCGACTTCGTCAGCGCGCAGCGCCAGGTGGTCGCGCCG GCCTTCACCTGGAAGCTCGGCGGCAGCACCGTGCTGGACTACAGCGGCGAATACCTGCGGCACCGCGCGCCGCTGGACCG GGGCGTGGTGGCGGTCGGCAACCGGCTCGGCGACGTGCCGCGCAGCCGCTTCCTGGGCGAGCCGGGCGACGGCGACGTGA CCGTGCGCAACACCACCCACCAGCTGTCGCTGCTGCACGAGTGGAACGCGCAGTGGCGCAGCCGTTTCGCGCTCTCCTAC CGCACCACGGGCCTGGACGGGTTCTCCTCCGAGGCCTCGTCCCTGCTGGCCGACGGCACGCTGCGCCGCCAGCGCCGCTT GCGCGATTTCTCGTCCGACGACACGGCGCTGCAGGGCGAGCTGATCGGCAACCTGCAATGGGGCGACACGCCGCACGAAC TGCTGCTGGGCGTGGAGACCTACCGCTACACGCTGGATGCGCGCATGCTGCGCATCAATCCCACGGCCGCCGCGCCCTAC GCGATCGACATCCACCAGCCGGTGTACGGGCAACCCCGGCCGGCCCCCGGCCCCAATACGGACTTCACCGAACGCCAGCG CAACACGGCCCTCTACGTGCAGGACGCGATCCAGCTGGCGCCGCAGTGGCGCGTGCTGGCCGGCGCGCGCTTCGACCGCT ACCGGCAGACCTACGACAACCACCGCACCGGCACCACCGACGGCCAGGACCCGACCGCCGTCTCCCCGCGCGTGGGCGTG AGCTGGCTGCCCCATGCGCAGTGGACGGTGTACGCCAACGCGGGCACGTCGTTCCGCCCGAACAGCGGCTTCACCTCCGC CGTGGGCCGGAGCGGCCTGGCGCTGGATCCGGAGAAGGGCCGCGCGCTGGAAGTCGGCGTGAAATGGGAGAGCGCGGACC AGCGCCTGGGCGCCACGGCCGCCCTCTTCGACATCACCAAGCGCAACATGCTGACCACCGATCCGGTGGACAGCAGCTTC CAGGTCACGGCGGGCAAGGTGCGCAGCCGCGGCCTGGAGTTCGACCTGGCGGGACAGCTCAGCTCGCACTGGCGCCTGAA CGCCAGCCTGGTGCTGAACGACGTGGACGTGCTGCGCGACAACACGCTCGAGATCGGCAGCCGCCTCATCAACGTGCCGC GCGTGAACGGCAGCCTGCTCGCGGTGTACGAGGATGCGCTCGCCAGCGGCCAGCGCTATGGCGTGGGAGGCGGCGTCACG CACGTGGGCCGGCGGCTGGGCGCGGCCCGCACGCAGGCCGAAGCGCAGGCCGGCACGCCTGCCTTCGAGCTGCCCGCCTA CACCACGGCGAAAATCGTCGCGTACTGGCGCCTCACGCCCGCGGTGCGGCTCACGCTGGACGTGGACAACGTGTTCGACA AGACCTACTACGCCACGTCCGTGAGCCGGCTGTGGGTGACGCCCGGCAGCGGGCGCACCGTGGCCGTGGGCCTGCAGGCC CGGTTCTGA
Upstream 100 bases:
>100_bases GTTCCGCGGACACGCGGGGGCCCATGCCGTGCGCGCACTGCCGCACGGCGCCCCCGGCGTGCCGGAATGGCTGCAGTCCA CTTGTTGCACCATCGATTCC
Downstream 100 bases:
>100_bases GACGCCGCACTCCATGCGCCATTCCATGAAGAATCCGCCGCCCCTTGGCGCCACGCGGCGCGGCACCCTGCGGATGCTGG TCGCCGGCGCCGCGGGCGCG
Product: TonB-dependent siderophore receptor
Products: NA
Alternate protein names: Ferric hydroxamate receptor; Ferric hydroxamate uptake [H]
Number of amino acids: Translated: 722; Mature: 721
Protein sequence:
>722_residues MPLFRHPSFKALPLAMAAAALVAGGARAQSGPAPSPSGDAQLSTVDVVGRTDSGTYQAQEAADAKTDLPLRELPQSVRVI TRQAIDDLGATRLDDVLDYVGGVSRQNNFGGLWDNVAIRGLPGNENTGSATLLNGFSGNRGFNAPRDMAGVERIEFLKGP AAALYGSSEPGGTLNIVTKRPKWKPANAVEAYAGSHGYRRGALDSTGPLGENLAYRLNVAVEDRDSFRDFVSAQRQVVAP AFTWKLGGSTVLDYSGEYLRHRAPLDRGVVAVGNRLGDVPRSRFLGEPGDGDVTVRNTTHQLSLLHEWNAQWRSRFALSY RTTGLDGFSSEASSLLADGTLRRQRRLRDFSSDDTALQGELIGNLQWGDTPHELLLGVETYRYTLDARMLRINPTAAAPY AIDIHQPVYGQPRPAPGPNTDFTERQRNTALYVQDAIQLAPQWRVLAGARFDRYRQTYDNHRTGTTDGQDPTAVSPRVGV SWLPHAQWTVYANAGTSFRPNSGFTSAVGRSGLALDPEKGRALEVGVKWESADQRLGATAALFDITKRNMLTTDPVDSSF QVTAGKVRSRGLEFDLAGQLSSHWRLNASLVLNDVDVLRDNTLEIGSRLINVPRVNGSLLAVYEDALASGQRYGVGGGVT HVGRRLGAARTQAEAQAGTPAFELPAYTTAKIVAYWRLTPAVRLTLDVDNVFDKTYYATSVSRLWVTPGSGRTVAVGLQA RF
Sequences:
>Translated_722_residues MPLFRHPSFKALPLAMAAAALVAGGARAQSGPAPSPSGDAQLSTVDVVGRTDSGTYQAQEAADAKTDLPLRELPQSVRVI TRQAIDDLGATRLDDVLDYVGGVSRQNNFGGLWDNVAIRGLPGNENTGSATLLNGFSGNRGFNAPRDMAGVERIEFLKGP AAALYGSSEPGGTLNIVTKRPKWKPANAVEAYAGSHGYRRGALDSTGPLGENLAYRLNVAVEDRDSFRDFVSAQRQVVAP AFTWKLGGSTVLDYSGEYLRHRAPLDRGVVAVGNRLGDVPRSRFLGEPGDGDVTVRNTTHQLSLLHEWNAQWRSRFALSY RTTGLDGFSSEASSLLADGTLRRQRRLRDFSSDDTALQGELIGNLQWGDTPHELLLGVETYRYTLDARMLRINPTAAAPY AIDIHQPVYGQPRPAPGPNTDFTERQRNTALYVQDAIQLAPQWRVLAGARFDRYRQTYDNHRTGTTDGQDPTAVSPRVGV SWLPHAQWTVYANAGTSFRPNSGFTSAVGRSGLALDPEKGRALEVGVKWESADQRLGATAALFDITKRNMLTTDPVDSSF QVTAGKVRSRGLEFDLAGQLSSHWRLNASLVLNDVDVLRDNTLEIGSRLINVPRVNGSLLAVYEDALASGQRYGVGGGVT HVGRRLGAARTQAEAQAGTPAFELPAYTTAKIVAYWRLTPAVRLTLDVDNVFDKTYYATSVSRLWVTPGSGRTVAVGLQA RF >Mature_721_residues PLFRHPSFKALPLAMAAAALVAGGARAQSGPAPSPSGDAQLSTVDVVGRTDSGTYQAQEAADAKTDLPLRELPQSVRVIT RQAIDDLGATRLDDVLDYVGGVSRQNNFGGLWDNVAIRGLPGNENTGSATLLNGFSGNRGFNAPRDMAGVERIEFLKGPA AALYGSSEPGGTLNIVTKRPKWKPANAVEAYAGSHGYRRGALDSTGPLGENLAYRLNVAVEDRDSFRDFVSAQRQVVAPA FTWKLGGSTVLDYSGEYLRHRAPLDRGVVAVGNRLGDVPRSRFLGEPGDGDVTVRNTTHQLSLLHEWNAQWRSRFALSYR TTGLDGFSSEASSLLADGTLRRQRRLRDFSSDDTALQGELIGNLQWGDTPHELLLGVETYRYTLDARMLRINPTAAAPYA IDIHQPVYGQPRPAPGPNTDFTERQRNTALYVQDAIQLAPQWRVLAGARFDRYRQTYDNHRTGTTDGQDPTAVSPRVGVS WLPHAQWTVYANAGTSFRPNSGFTSAVGRSGLALDPEKGRALEVGVKWESADQRLGATAALFDITKRNMLTTDPVDSSFQ VTAGKVRSRGLEFDLAGQLSSHWRLNASLVLNDVDVLRDNTLEIGSRLINVPRVNGSLLAVYEDALASGQRYGVGGGVTH VGRRLGAARTQAEAQAGTPAFELPAYTTAKIVAYWRLTPAVRLTLDVDNVFDKTYYATSVSRLWVTPGSGRTVAVGLQAR F
Specific function: This receptor binds the ferrichrome-iron ligand. It interacts with the tonB protein, which is responsible for energy coupling of the ferrichrome-promoted iron transport system. Acts as a receptor for bacteriophage T5 as well as T1, phi80 and colicin M. Bi
COG id: COG1629
COG function: function code P; Outer membrane receptor proteins, mostly Fe transport
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1786344, Length=722, Percent_Identity=27.7008310249307, Blast_Score=194, Evalue=1e-50, Organism=Escherichia coli, GI1787024, Length=752, Percent_Identity=26.5957446808511, Blast_Score=164, Evalue=2e-41, Organism=Escherichia coli, GI1787344, Length=277, Percent_Identity=27.0758122743682, Blast_Score=73, Evalue=7e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010917 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 78205; Mature: 78074
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLFRHPSFKALPLAMAAAALVAGGARAQSGPAPSPSGDAQLSTVDVVGRTDSGTYQAQE CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCHHH AADAKTDLPLRELPQSVRVITRQAIDDLGATRLDDVLDYVGGVSRQNNFGGLWDNVAIRG HCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEE LPGNENTGSATLLNGFSGNRGFNAPRDMAGVERIEFLKGPAAALYGSSEPGGTLNIVTKR CCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCHHEEECCCCCCCEEEEEECC PKWKPANAVEAYAGSHGYRRGALDSTGPLGENLAYRLNVAVEDRDSFRDFVSAQRQVVAP CCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHEECC AFTWKLGGSTVLDYSGEYLRHRAPLDRGVVAVGNRLGDVPRSRFLGEPGDGDVTVRNTTH EEEEECCCCEEECCCCHHHHHCCCCCCCHHHHHHHHCCCCHHHHCCCCCCCCEEEECCHH QLSLLHEWNAQWRSRFALSYRTTGLDGFSSEASSLLADGTLRRQRRLRDFSSDDTALQGE HHHHHHHHCHHHHHEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECE LIGNLQWGDTPHELLLGVETYRYTLDARMLRINPTAAAPYAIDIHQPVYGQPRPAPGPNT EEECCCCCCCHHHHHEEHHHHEEEEEEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCC DFTERQRNTALYVQDAIQLAPQWRVLAGARFDRYRQTYDNHRTGTTDGQDPTAVSPRVGV CHHHHHCCCEEEEEHHHHHCCCEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC SWLPHAQWTVYANAGTSFRPNSGFTSAVGRSGLALDPEKGRALEVGVKWESADQRLGATA EECCCCCEEEEECCCCCCCCCCCCHHHHCCCCCEECCCCCCEEEEEEEECCCCHHCCCHH ALFDITKRNMLTTDPVDSSFQVTAGKVRSRGLEFDLAGQLSSHWRLNASLVLNDVDVLRD HHHHHHHCCCEECCCCCCCEEEEHHHHHHCCCCEEECCCCCCCEEEEEEEEEECHHHHHC NTLEIGSRLINVPRVNGSLLAVYEDALASGQRYGVGGGVTHVGRRLGAARTQAEAQAGTP CHHHHHHHHEECCCCCCCEEEEEEHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC AFELPAYTTAKIVAYWRLTPAVRLTLDVDNVFDKTYYATSVSRLWVTPGSGRTVAVGLQA CEECCCCCCEEEEEEEEECCEEEEEEEHHHHHCCHHEEEEEEEEEEECCCCCEEEEEEEE RF CC >Mature Secondary Structure PLFRHPSFKALPLAMAAAALVAGGARAQSGPAPSPSGDAQLSTVDVVGRTDSGTYQAQE CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCHHH AADAKTDLPLRELPQSVRVITRQAIDDLGATRLDDVLDYVGGVSRQNNFGGLWDNVAIRG HCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEE LPGNENTGSATLLNGFSGNRGFNAPRDMAGVERIEFLKGPAAALYGSSEPGGTLNIVTKR CCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCHHEEECCCCCCCEEEEEECC PKWKPANAVEAYAGSHGYRRGALDSTGPLGENLAYRLNVAVEDRDSFRDFVSAQRQVVAP CCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHEECC AFTWKLGGSTVLDYSGEYLRHRAPLDRGVVAVGNRLGDVPRSRFLGEPGDGDVTVRNTTH EEEEECCCCEEECCCCHHHHHCCCCCCCHHHHHHHHCCCCHHHHCCCCCCCCEEEECCHH QLSLLHEWNAQWRSRFALSYRTTGLDGFSSEASSLLADGTLRRQRRLRDFSSDDTALQGE HHHHHHHHCHHHHHEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECE LIGNLQWGDTPHELLLGVETYRYTLDARMLRINPTAAAPYAIDIHQPVYGQPRPAPGPNT EEECCCCCCCHHHHHEEHHHHEEEEEEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCC DFTERQRNTALYVQDAIQLAPQWRVLAGARFDRYRQTYDNHRTGTTDGQDPTAVSPRVGV CHHHHHCCCEEEEEHHHHHCCCEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC SWLPHAQWTVYANAGTSFRPNSGFTSAVGRSGLALDPEKGRALEVGVKWESADQRLGATA EECCCCCEEEEECCCCCCCCCCCCHHHHCCCCCEECCCCCCEEEEEEEECCCCHHCCCHH ALFDITKRNMLTTDPVDSSFQVTAGKVRSRGLEFDLAGQLSSHWRLNASLVLNDVDVLRD HHHHHHHCCCEECCCCCCCEEEEHHHHHHCCCCEEECCCCCCCEEEEEEEEEECHHHHHC NTLEIGSRLINVPRVNGSLLAVYEDALASGQRYGVGGGVTHVGRRLGAARTQAEAQAGTP CHHHHHHHHEECCCCCCCEEEEEEHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC AFELPAYTTAKIVAYWRLTPAVRLTLDVDNVFDKTYYATSVSRLWVTPGSGRTVAVGLQA CEECCCCCCEEEEEEEEECCEEEEEEEHHHHHCCHHEEEEEEEEEEECCCCCEEEEEEEE RF CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3079747; 8202364; 9278503; 2823072; 7515827; 8617231; 9856937; 9865695; 10850805 [H]