Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612637
Identifier: 120612637
GI number: 120612637
Start: 4436640
End: 4437194
Strand: Direct
Name: 120612637
Synonym: Aave_3999
Alternate gene names: NA
Gene position: 4436640-4437194 (Clockwise)
Preceding gene: 120612636
Following gene: 120612638
Centisome position: 82.88
GC content: 74.59
Gene sequence:
>555_bases ATGGGGACGATCCGCCAGCAGCGCGGCCTTCTTTTGAAAACAGCCCATGCAGGCAAGCCGGCAGGTACAGAGGCTGCACG GTCCGGCGCGCGGCTATCATCCCGCGCTCCGGAAACTCCCATGCGACCGCACCGCTTCACGCCCTTCCTGCTGCTGGCCC TGTGGCTGAATGCCTGCCTGGGCTGGTCGTGGCATGAGGCGACGCACCTGCGACAGGCCCTGCAGCCCGCCGTGCCTGCG GCGGTGGCGGCGGCGGGGGTGACAGCGGCGGCAGGGGACAAAGGCAGCCCGTCTGCCTCCGCTGCGTCCGAAGCGCCCTC CGAAGACACGGCGCCGCAGCACGGGACATGCGCTGCCTGCCTGGCCTTCGCCCACCTGCAGGCCGCCGCGCCGCAACCGG CGCCGCAGCCCTGTCCGGAAGGGCCGGGCGCCACCCCCGGCCCCCCGGACCATGCCGCACGGGCGCGCGGACGCTGCACC GCGCAACCCTTCCTGGCGCGCGGCCCTCCGGCCGGCACTGCCAACGCGCCCGCGCCCTCCGCAGAGGCGGCCTGA
Upstream 100 bases:
>100_bases GCCGCGACCGGGTCTGCGTCGCGCCCGCGTCACATACCAGCACGTAGTTCCGGCGGGCGACCAGCTCACGCGTGCCGGCC ACGCGCGCGGGCCGGCCGAG
Downstream 100 bases:
>100_bases GCGCGCGGCGGCATATCCCGGCCGCCTTCTTCCTTTCCTCTTCGCTTCCTGCCCAGGACCGCGGTTCCGCGGACACGCGG GGGCCCATGCCGTGCGCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 184; Mature: 183
Protein sequence:
>184_residues MGTIRQQRGLLLKTAHAGKPAGTEAARSGARLSSRAPETPMRPHRFTPFLLLALWLNACLGWSWHEATHLRQALQPAVPA AVAAAGVTAAAGDKGSPSASAASEAPSEDTAPQHGTCAACLAFAHLQAAAPQPAPQPCPEGPGATPGPPDHAARARGRCT AQPFLARGPPAGTANAPAPSAEAA
Sequences:
>Translated_184_residues MGTIRQQRGLLLKTAHAGKPAGTEAARSGARLSSRAPETPMRPHRFTPFLLLALWLNACLGWSWHEATHLRQALQPAVPA AVAAAGVTAAAGDKGSPSASAASEAPSEDTAPQHGTCAACLAFAHLQAAAPQPAPQPCPEGPGATPGPPDHAARARGRCT AQPFLARGPPAGTANAPAPSAEAA >Mature_183_residues GTIRQQRGLLLKTAHAGKPAGTEAARSGARLSSRAPETPMRPHRFTPFLLLALWLNACLGWSWHEATHLRQALQPAVPAA VAAAGVTAAAGDKGSPSASAASEAPSEDTAPQHGTCAACLAFAHLQAAAPQPAPQPCPEGPGATPGPPDHAARARGRCTA QPFLARGPPAGTANAPAPSAEAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18498; Mature: 18367
Theoretical pI: Translated: 9.19; Mature: 9.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTIRQQRGLLLKTAHAGKPAGTEAARSGARLSSRAPETPMRPHRFTPFLLLALWLNACL CCCCCCCCCCEEEECCCCCCCCHHHHHHCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH GWSWHEATHLRQALQPAVPAAVAAAGVTAAAGDKGSPSASAASEAPSEDTAPQHGTCAAC CCCHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCHHCCCCCCCCCCCCCHHHHH LAFAHLQAAAPQPAPQPCPEGPGATPGPPDHAARARGRCTAQPFLARGPPAGTANAPAPS HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCHHHCCCCCCCCCCCCCC AEAA CCCC >Mature Secondary Structure GTIRQQRGLLLKTAHAGKPAGTEAARSGARLSSRAPETPMRPHRFTPFLLLALWLNACL CCCCCCCCCEEEECCCCCCCCHHHHHHCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH GWSWHEATHLRQALQPAVPAAVAAAGVTAAAGDKGSPSASAASEAPSEDTAPQHGTCAAC CCCHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCHHCCCCCCCCCCCCCHHHHH LAFAHLQAAAPQPAPQPCPEGPGATPGPPDHAARARGRCTAQPFLARGPPAGTANAPAPS HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCHHHCCCCCCCCCCCCCC AEAA CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA