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The map label for this gene is bphP [H]

Identifier: 120612631

GI number: 120612631

Start: 4427670

End: 4428842

Strand: Reverse

Name: bphP [H]

Synonym: Aave_3993

Alternate gene names: 120612631

Gene position: 4428842-4427670 (Counterclockwise)

Preceding gene: 120612632

Following gene: 120612628

Centisome position: 82.74

GC content: 69.57

Gene sequence:

>1173_bases
ATGATCGCGCCGCCGCGCATGCCTCGCGCCGCGTCCGCGCCGCAGCGCCACGCCGCACCGGTGAAGTGCCTGCTGGTGGA
CGACGTGCCGGAAAACCTGATCGCGCTCGAGGCGCTGCTGCGCAGCGACGACGTGCACATCCTCAAGGCCGCTTCCGGCC
CCGAGGCGCTGGAACTGCTGCTGGCCCACGCCGACGTGGCGCTGGCGATGCTCGACGTGCAGATGCCCGAGATGAACGGC
TTCGAGCTGGCCGAGCTCATCCGGGGCAGCGAGCGCACCCGCCACATCCCGCTCATCTTCATGACCGCGGGATCGCGGGA
CCAGAACTGGCAATTCAAGGGCTACGAGAACGGCGCCGTCGATTTCCTCTACAAGCCCATCGATCCGCACATGCTGGTCA
ACAAGGCCAATGTGTTCTTCGAGATGCACCGGCAGAAGGTGGCGCTGGCCTGCGAGCTCCAGGACCGCACCCATGCGCTC
AAGCTCAGCGAGATGTTCATGGCCGTGCTCAGCCACGACCTGCGCGGCCCGCTCAGCGCCATCCTCGCCAGTGCCGCCGT
GCTGCGCAAGACCCAGGAGCCCGACAAGGTCCTGGCCATGGCCGACAAGGTGCAGACCAGCGCACAGCGCATGGGCCGCA
TGATCGAAGACCTGCTGGACGTGACGCGGGTGCGCCAGTTCGGCGGGCTGCCGGTGCGGGCGGCGCCTGCCGACCTGGGC
GAACTCGTGCAGCGCACGGCCGCCGAATGGCGCACCAGCCATCCCGATCGCATCATCGAGGTATGGCAGGAGGGCGGCCT
CGGCGGCCAGTGGGATGCCGAGCGGCTGTGCCAGGTCGTGTCCAACCTGCTGGGCAATGCCATCCACCACGGCGACCCCC
GGCAGCCCGTCCAGGCCGCGCTGGACGGCACCGCACCGCACAGTGTCGTGATGACGGTCCGCAACGGCGGGGAGATCCCC
CAGGCGCTGATCCCGCAGCTCTTCGACCCTTTCCGCGGACGCGAGCGCGAGCCCGGCCGCCACCAGGGGCTGGGACTGGG
CCTCTACATCGTGCACCAGATCGTGCACGGGCACGGCGGCACGATCAGCGTGCGTTCGGGCGAGGGGAGCACCACCTTTC
GCGTCGAACTGCCGCGCGAAGCGCCGCCCTGCGCACTGTCCGGGCGGGACTGA

Upstream 100 bases:

>100_bases
CCATGCCCGAAGCGGCGCTGCAGCTGTGTACGCCGGCCCACGTCCTTTCGCCGCAGCGCATCGCCGACTGGCTGGCTGCG
CTGCCGCCCGGGAGCCGCGC

Downstream 100 bases:

>100_bases
CGGTGGCCCGGGCCGCGCTGGCGCAGCGCGGCCGGATGCGCGCTCAGGCCGTGCCGGGCCTCAGCGCGCTGCGGATCGAT
TCCATCAGCGTTTCCAGGTC

Product: response regulator receiver sensor signal transduction histidine kinase

Products: NA

Alternate protein names: Phytochrome-like protein [H]

Number of amino acids: Translated: 390; Mature: 390

Protein sequence:

>390_residues
MIAPPRMPRAASAPQRHAAPVKCLLVDDVPENLIALEALLRSDDVHILKAASGPEALELLLAHADVALAMLDVQMPEMNG
FELAELIRGSERTRHIPLIFMTAGSRDQNWQFKGYENGAVDFLYKPIDPHMLVNKANVFFEMHRQKVALACELQDRTHAL
KLSEMFMAVLSHDLRGPLSAILASAAVLRKTQEPDKVLAMADKVQTSAQRMGRMIEDLLDVTRVRQFGGLPVRAAPADLG
ELVQRTAAEWRTSHPDRIIEVWQEGGLGGQWDAERLCQVVSNLLGNAIHHGDPRQPVQAALDGTAPHSVVMTVRNGGEIP
QALIPQLFDPFRGREREPGRHQGLGLGLYIVHQIVHGHGGTISVRSGEGSTTFRVELPREAPPCALSGRD

Sequences:

>Translated_390_residues
MIAPPRMPRAASAPQRHAAPVKCLLVDDVPENLIALEALLRSDDVHILKAASGPEALELLLAHADVALAMLDVQMPEMNG
FELAELIRGSERTRHIPLIFMTAGSRDQNWQFKGYENGAVDFLYKPIDPHMLVNKANVFFEMHRQKVALACELQDRTHAL
KLSEMFMAVLSHDLRGPLSAILASAAVLRKTQEPDKVLAMADKVQTSAQRMGRMIEDLLDVTRVRQFGGLPVRAAPADLG
ELVQRTAAEWRTSHPDRIIEVWQEGGLGGQWDAERLCQVVSNLLGNAIHHGDPRQPVQAALDGTAPHSVVMTVRNGGEIP
QALIPQLFDPFRGREREPGRHQGLGLGLYIVHQIVHGHGGTISVRSGEGSTTFRVELPREAPPCALSGRD
>Mature_390_residues
MIAPPRMPRAASAPQRHAAPVKCLLVDDVPENLIALEALLRSDDVHILKAASGPEALELLLAHADVALAMLDVQMPEMNG
FELAELIRGSERTRHIPLIFMTAGSRDQNWQFKGYENGAVDFLYKPIDPHMLVNKANVFFEMHRQKVALACELQDRTHAL
KLSEMFMAVLSHDLRGPLSAILASAAVLRKTQEPDKVLAMADKVQTSAQRMGRMIEDLLDVTRVRQFGGLPVRAAPADLG
ELVQRTAAEWRTSHPDRIIEVWQEGGLGGQWDAERLCQVVSNLLGNAIHHGDPRQPVQAALDGTAPHSVVMTVRNGGEIP
QALIPQLFDPFRGREREPGRHQGLGLGLYIVHQIVHGHGGTISVRSGEGSTTFRVELPREAPPCALSGRD

Specific function: Photoreceptor which exists in two forms that are reversibly interconvertible by light:the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI1789149, Length=242, Percent_Identity=28.099173553719, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1786912, Length=234, Percent_Identity=26.4957264957265, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003018
- InterPro:   IPR013654
- InterPro:   IPR016132
- InterPro:   IPR001294
- InterPro:   IPR013515
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF01590 GAF; PF02518 HATPase_c; PF00512 HisKA; PF08446 PAS_2; PF00360 Phytochrome [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 42824; Mature: 42824

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAPPRMPRAASAPQRHAAPVKCLLVDDVPENLIALEALLRSDDVHILKAASGPEALELL
CCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCEEEEEECCCHHHHHHH
LAHADVALAMLDVQMPEMNGFELAELIRGSERTRHIPLIFMTAGSRDQNWQFKGYENGAV
HHHHHHHHHHHHEECCCCCCHHHHHHHCCCCCCCCCCEEEEECCCCCCCCEECCCCCCCE
DFLYKPIDPHMLVNKANVFFEMHRQKVALACELQDRTHALKLSEMFMAVLSHDLRGPLSA
EEEECCCCCHHHHHHHHHHHHHHHHHEEEEEEECHHHHHHHHHHHHHHHHHHHHCCHHHH
ILASAAVLRKTQEPDKVLAMADKVQTSAQRMGRMIEDLLDVTRVRQFGGLPVRAAPADLG
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
ELVQRTAAEWRTSHPDRIIEVWQEGGLGGQWDAERLCQVVSNLLGNAIHHGDPRQPVQAA
HHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHH
LDGTAPHSVVMTVRNGGEIPQALIPQLFDPFRGREREPGRHQGLGLGLYIVHQIVHGHGG
HCCCCCCEEEEEECCCCCCHHHHHHHHHCHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCC
TISVRSGEGSTTFRVELPREAPPCALSGRD
EEEEECCCCCEEEEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MIAPPRMPRAASAPQRHAAPVKCLLVDDVPENLIALEALLRSDDVHILKAASGPEALELL
CCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCEEEEEECCCHHHHHHH
LAHADVALAMLDVQMPEMNGFELAELIRGSERTRHIPLIFMTAGSRDQNWQFKGYENGAV
HHHHHHHHHHHHEECCCCCCHHHHHHHCCCCCCCCCCEEEEECCCCCCCCEECCCCCCCE
DFLYKPIDPHMLVNKANVFFEMHRQKVALACELQDRTHALKLSEMFMAVLSHDLRGPLSA
EEEECCCCCHHHHHHHHHHHHHHHHHEEEEEEECHHHHHHHHHHHHHHHHHHHHCCHHHH
ILASAAVLRKTQEPDKVLAMADKVQTSAQRMGRMIEDLLDVTRVRQFGGLPVRAAPADLG
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
ELVQRTAAEWRTSHPDRIIEVWQEGGLGGQWDAERLCQVVSNLLGNAIHHGDPRQPVQAA
HHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHH
LDGTAPHSVVMTVRNGGEIPQALIPQLFDPFRGREREPGRHQGLGLGLYIVHQIVHGHGG
HCCCCCCEEEEEECCCCCCHHHHHHHHHCHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCC
TISVRSGEGSTTFRVELPREAPPCALSGRD
EEEEECCCCCEEEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]