Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
---|---|
Accession | NC_008752 |
Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is cheB2 [H]
Identifier: 120612632
GI number: 120612632
Start: 4428839
End: 4429450
Strand: Reverse
Name: cheB2 [H]
Synonym: Aave_3994
Alternate gene names: 120612632
Gene position: 4429450-4428839 (Counterclockwise)
Preceding gene: 120612633
Following gene: 120612631
Centisome position: 82.75
GC content: 72.39
Gene sequence:
>612_bases ATGATCCGTCCCACCGCCGCCCCGCAGGTGCCCGCCCGGCCGTTCGAGGCGATCGTCATCGGCGGTTCCGCCGGCAGCAT CGAGGCGCTGTCCGTGCTGCTGCCCGCGCTCGGGCCCGCGCAGCGCGCCGCGGTGTTCGTGGTGCTGCACCTGCCCCGCG ACCGGCGCAGCCTGCTGTGCGAGATCTTCCAGCCGCGCTGCGCGCTGCCGATGCGCGAGGCGCAGGACAAGGAGCCTGTG CAGGCGGGCACCGTCTATTTCGCGCCGCCCGACTACCACCTGCTCATCGACGCCGGGCCGTCGCTGGCCCTGTCGGTCGA TGATCCGGTGCATTTCTCGCGTCCGTCCATCGACGTTCTTTTCGAGTCCGCCGCGGACGCCTACGCCGGGCGGCTGCTGG CCATCCTGCTCTCCGGCGCCAACCACGACGGGGCCCAGGGCATCGCGGCCGTGCAGGCCGCGGGGGGCACGACCATCGTG CAAGATCCCGAAAGCGCTCCCATGAGTTCCATGCCCGAAGCGGCGCTGCAGCTGTGTACGCCGGCCCACGTCCTTTCGCC GCAGCGCATCGCCGACTGGCTGGCTGCGCTGCCGCCCGGGAGCCGCGCATGA
Upstream 100 bases:
>100_bases TGGGGCTGGGCTCGAAGGAGTCGCTGCGCTTTTCGTCGCACGTGCAATCGTTCGACGAGTTGGTCGCGCCCGAGCGCATC TACCAGAAGCGGGGGGGCGC
Downstream 100 bases:
>100_bases TCGCGCCGCCGCGCATGCCTCGCGCCGCGTCCGCGCCGCAGCGCCACGCCGCACCGGTGAAGTGCCTGCTGGTGGACGAC GTGCCGGAAAACCTGATCGC
Product: CheB methylesterase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 203; Mature: 203
Protein sequence:
>203_residues MIRPTAAPQVPARPFEAIVIGGSAGSIEALSVLLPALGPAQRAAVFVVLHLPRDRRSLLCEIFQPRCALPMREAQDKEPV QAGTVYFAPPDYHLLIDAGPSLALSVDDPVHFSRPSIDVLFESAADAYAGRLLAILLSGANHDGAQGIAAVQAAGGTTIV QDPESAPMSSMPEAALQLCTPAHVLSPQRIADWLAALPPGSRA
Sequences:
>Translated_203_residues MIRPTAAPQVPARPFEAIVIGGSAGSIEALSVLLPALGPAQRAAVFVVLHLPRDRRSLLCEIFQPRCALPMREAQDKEPV QAGTVYFAPPDYHLLIDAGPSLALSVDDPVHFSRPSIDVLFESAADAYAGRLLAILLSGANHDGAQGIAAVQAAGGTTIV QDPESAPMSSMPEAALQLCTPAHVLSPQRIADWLAALPPGSRA >Mature_203_residues MIRPTAAPQVPARPFEAIVIGGSAGSIEALSVLLPALGPAQRAAVFVVLHLPRDRRSLLCEIFQPRCALPMREAQDKEPV QAGTVYFAPPDYHLLIDAGPSLALSVDDPVHFSRPSIDVLFESAADAYAGRLLAILLSGANHDGAQGIAAVQAAGGTTIV QDPESAPMSSMPEAALQLCTPAHVLSPQRIADWLAALPPGSRA
Specific function: May be involved in the modulation of the chemotaxis system [H]
COG id: COG2201
COG function: function code NT; Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 cheB-type methylesterase domain [H]
Homologues:
Organism=Escherichia coli, GI1788192, Length=182, Percent_Identity=30.2197802197802, Blast_Score=85, Evalue=4e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000673 [H]
Pfam domain/function: PF01339 CheB_methylest [H]
EC number: =3.1.1.61 [H]
Molecular weight: Translated: 21207; Mature: 21207
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: PS50122 CHEB
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRPTAAPQVPARPFEAIVIGGSAGSIEALSVLLPALGPAQRAAVFVVLHLPRDRRSLLC CCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCEEEEEEEECCCCHHHHHH EIFQPRCALPMREAQDKEPVQAGTVYFAPPDYHLLIDAGPSLALSVDDPVHFSRPSIDVL HHHCCCCCCCCHHCCCCCCCCCCEEEECCCCEEEEEECCCCEEEEECCCCCCCCCCHHHH FESAADAYAGRLLAILLSGANHDGAQGIAAVQAAGGTTIVQDPESAPMSSMPEAALQLCT HHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCEEEECCCCCCCCCCCHHHHHHCC PAHVLSPQRIADWLAALPPGSRA CHHHCCHHHHHHHHHHCCCCCCC >Mature Secondary Structure MIRPTAAPQVPARPFEAIVIGGSAGSIEALSVLLPALGPAQRAAVFVVLHLPRDRRSLLC CCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCEEEEEEEECCCCHHHHHH EIFQPRCALPMREAQDKEPVQAGTVYFAPPDYHLLIDAGPSLALSVDDPVHFSRPSIDVL HHHCCCCCCCCHHCCCCCCCCCCEEEECCCCEEEEEECCCCEEEEECCCCCCCCCCHHHH FESAADAYAGRLLAILLSGANHDGAQGIAAVQAAGGTTIVQDPESAPMSSMPEAALQLCT HHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCEEEECCCCCCCCCCCHHHHHHCC PAHVLSPQRIADWLAALPPGSRA CHHHCCHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA