Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612588
Identifier: 120612588
GI number: 120612588
Start: 4374524
End: 4376344
Strand: Direct
Name: 120612588
Synonym: Aave_3949
Alternate gene names: NA
Gene position: 4374524-4376344 (Clockwise)
Preceding gene: 120612587
Following gene: 120612589
Centisome position: 81.72
GC content: 70.51
Gene sequence:
>1821_bases ATGCTGAAAAACTCCACCTCCGCGCCGAGCGCCTCGCCCCGGCACCTGCTGACCTCCCCGGGCAAGGAGACGCAGCCCGC CAGCAGCCAGCCGGCTTCACCCATCGTCCGCGCAGGCAGCCGGCGCTTGCCGGAAATGGAACTGCAGCGCCTCGCACGGC CGGATGCGCAGGCCTCCACCTCCGCCGCGGCCTCTTCCACCAGGCCCCCGCGCAACGATGCGCCCAGGGCCCCGGTGCGC GAAATGTCGCTGCGCTACATGGCCGATGTGGAAGCCCAGACCGACACGCCCGTCCCGGGCAGGGGCGCACGGCTCCTGCG GCAGGGCAGGAACCTGGCATCCAGGGCCCGGAATCTGGCGCAGAGCTCGATGGCCCAGGTAAGGAGCGGCGCGGCCACGG GTGCCGCGTACGCGGGACAGGCCGCCATGGCGGTCAAGGACAAAGCCGTGCAGGGCTACCACTACACGGCGGCGAAGGCG CAGCAGGGCTGGGAGGTCACCAGCCAGTTCACCCGGCAAAGCGCGCAGGACGTCGTGGGCGACCGGCTGCCCAGCCGCGC GGCCGTGGGTGCCTTCGCCGGCCACACGGTGCAGCAGTTGCTGACCTGCGGCATTCCCACCTTCTCCCGCGAATACGCGA TGCTGCAGATCTACCGCGGCATCGTGAATTCCAGGTTCGCCCAGGACAACCCCTTCGCCATCGTCGGCATGCAGACCGCC GTGTCGATGGCGGCCGTCCTGGCGCACACGAAGTTGCGGCATGCCCGCATGGACCGCGATCCGGAAGCGGCGGTCAAGGG CCATTTCGGCCTCACCGACGCGCAATGGGACGCCATGTCCCCGCAGGACAAGGCAAGGCACAAAGAGATCCAGCGGGCGG ATTCGCGGCGCGTGACGGCGAACCAGGTCATCGCCGAAACCGGCAACTTCGTGATGGGCGCCACCGCCGCGGCCGGCGGG GACCCCAGCGTGTCGGCACGGGTGCTCGCCACCCAGGTGCGCAACATCATCTACGCCGCCATGCGCGAACTGATGCAGGC CAGCCTCAAGTTCGTCGATACCCGCGGTCCCGGCACCAGCGGCGTGAACAATGCCAACATGAGCTCCATGGCGGCGGTGT ACACATTGATGACCATGGGCGCCAGCACGGCCTCCGACGCCGTGGTCGGCGCGGTGCTGAACGCGCGCTCCGTCAGCCTC AGCGGGCTGCAGTTCCAGGTGGCGGACACGAACAACCCGGTCAACGATCCGCAACTGGAGAACGCGGCCCTGGTGGCCCT GGTCCGCGGGCTCTTCAACACCGCGGTGGAGGCGATCGACGCGGGAGTGGGCAAGCACTACGAGACGAAGCAGGTCGGCG CGCGGCAGGTGTGGAACTCGGGCAGCAAGCTGCCCATGAAGGACCACGACCGCATCCTGGACCACTCCGTCGCGCGGTTC TCCTGGAACCAGCTCGCGGGCATGGCCAATCTCGCGGTGCAGCAGGCGGCCAGGGCCACCGGCCTCGACAAGGCAGCCCC CGCGCTGACTTCGTTCCTCGGCGTCGGCACGACGGCCGCCGCCTTCGGCCTGGCCTACCGCAATACCAACCAGACCTACC AGGCCCACGCCAGGGTGCGCTCCGCCGTGGCGAGCGCGCAGGCGCCCGCCGCCCCGGCGACGGCTCCTGCGCCGGACGGC AGCTCTCAGGCGACGGCGTCCGGCACAGGCCACACCACGCAGGCGCGGCAGCGCCATGCCGCAGCCCAGGAGATCGAGGA GTCCACGGACGACGATGCCTCCGTACCGCCGCACGGCGCGCAGGCCCGGCCCACGGCCTGA
Upstream 100 bases:
>100_bases GCCGGCCTGGCCGTCCAGCTGGACGGATTCGCCGCCCTCGCCGCCAGCATGTCCGGTGCGCGCCCCCCCGGGCAATGACC CAGGACACAAGGAGTTCCCG
Downstream 100 bases:
>100_bases TATGGCACCGCGCAGGGACGATGCCGCCGTGCTACGCTGCGCGGCATCATGTTCAATCCCACGCAAGCGGACGTGCGCCG CTTTTTCTGCGCGGTGCATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 606; Mature: 606
Protein sequence:
>606_residues MLKNSTSAPSASPRHLLTSPGKETQPASSQPASPIVRAGSRRLPEMELQRLARPDAQASTSAAASSTRPPRNDAPRAPVR EMSLRYMADVEAQTDTPVPGRGARLLRQGRNLASRARNLAQSSMAQVRSGAATGAAYAGQAAMAVKDKAVQGYHYTAAKA QQGWEVTSQFTRQSAQDVVGDRLPSRAAVGAFAGHTVQQLLTCGIPTFSREYAMLQIYRGIVNSRFAQDNPFAIVGMQTA VSMAAVLAHTKLRHARMDRDPEAAVKGHFGLTDAQWDAMSPQDKARHKEIQRADSRRVTANQVIAETGNFVMGATAAAGG DPSVSARVLATQVRNIIYAAMRELMQASLKFVDTRGPGTSGVNNANMSSMAAVYTLMTMGASTASDAVVGAVLNARSVSL SGLQFQVADTNNPVNDPQLENAALVALVRGLFNTAVEAIDAGVGKHYETKQVGARQVWNSGSKLPMKDHDRILDHSVARF SWNQLAGMANLAVQQAARATGLDKAAPALTSFLGVGTTAAAFGLAYRNTNQTYQAHARVRSAVASAQAPAAPATAPAPDG SSQATASGTGHTTQARQRHAAAQEIEESTDDDASVPPHGAQARPTA
Sequences:
>Translated_606_residues MLKNSTSAPSASPRHLLTSPGKETQPASSQPASPIVRAGSRRLPEMELQRLARPDAQASTSAAASSTRPPRNDAPRAPVR EMSLRYMADVEAQTDTPVPGRGARLLRQGRNLASRARNLAQSSMAQVRSGAATGAAYAGQAAMAVKDKAVQGYHYTAAKA QQGWEVTSQFTRQSAQDVVGDRLPSRAAVGAFAGHTVQQLLTCGIPTFSREYAMLQIYRGIVNSRFAQDNPFAIVGMQTA VSMAAVLAHTKLRHARMDRDPEAAVKGHFGLTDAQWDAMSPQDKARHKEIQRADSRRVTANQVIAETGNFVMGATAAAGG DPSVSARVLATQVRNIIYAAMRELMQASLKFVDTRGPGTSGVNNANMSSMAAVYTLMTMGASTASDAVVGAVLNARSVSL SGLQFQVADTNNPVNDPQLENAALVALVRGLFNTAVEAIDAGVGKHYETKQVGARQVWNSGSKLPMKDHDRILDHSVARF SWNQLAGMANLAVQQAARATGLDKAAPALTSFLGVGTTAAAFGLAYRNTNQTYQAHARVRSAVASAQAPAAPATAPAPDG SSQATASGTGHTTQARQRHAAAQEIEESTDDDASVPPHGAQARPTA >Mature_606_residues MLKNSTSAPSASPRHLLTSPGKETQPASSQPASPIVRAGSRRLPEMELQRLARPDAQASTSAAASSTRPPRNDAPRAPVR EMSLRYMADVEAQTDTPVPGRGARLLRQGRNLASRARNLAQSSMAQVRSGAATGAAYAGQAAMAVKDKAVQGYHYTAAKA QQGWEVTSQFTRQSAQDVVGDRLPSRAAVGAFAGHTVQQLLTCGIPTFSREYAMLQIYRGIVNSRFAQDNPFAIVGMQTA VSMAAVLAHTKLRHARMDRDPEAAVKGHFGLTDAQWDAMSPQDKARHKEIQRADSRRVTANQVIAETGNFVMGATAAAGG DPSVSARVLATQVRNIIYAAMRELMQASLKFVDTRGPGTSGVNNANMSSMAAVYTLMTMGASTASDAVVGAVLNARSVSL SGLQFQVADTNNPVNDPQLENAALVALVRGLFNTAVEAIDAGVGKHYETKQVGARQVWNSGSKLPMKDHDRILDHSVARF SWNQLAGMANLAVQQAARATGLDKAAPALTSFLGVGTTAAAFGLAYRNTNQTYQAHARVRSAVASAQAPAAPATAPAPDG SSQATASGTGHTTQARQRHAAAQEIEESTDDDASVPPHGAQARPTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63761; Mature: 63761
Theoretical pI: Translated: 10.62; Mature: 10.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKNSTSAPSASPRHLLTSPGKETQPASSQPASPIVRAGSRRLPEMELQRLARPDAQAST CCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHCCCCCHHHH SAAASSTRPPRNDAPRAPVREMSLRYMADVEAQTDTPVPGRGARLLRQGRNLASRARNLA HHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH QSSMAQVRSGAATGAAYAGQAAMAVKDKAVQGYHYTAAKAQQGWEVTSQFTRQSAQDVVG HHHHHHHHHCCCCCHHHHCCHHHHHHHHHHCCCEEHHHHHHCCHHHHHHHHHHHHHHHHH DRLPSRAAVGAFAGHTVQQLLTCGIPTFSREYAMLQIYRGIVNSRFAQDNPFAIVGMQTA HCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHH VSMAAVLAHTKLRHARMDRDPEAAVKGHFGLTDAQWDAMSPQDKARHKEIQRADSRRVTA HHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHH NQVIAETGNFVMGATAAAGGDPSVSARVLATQVRNIIYAAMRELMQASLKFVDTRGPGTS HHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC GVNNANMSSMAAVYTLMTMGASTASDAVVGAVLNARSVSLSGLQFQVADTNNPVNDPQLE CCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCEEECCEEEEEECCCCCCCCCCHH NAALVALVRGLFNTAVEAIDAGVGKHYETKQVGARQVWNSGSKLPMKDHDRILDHSVARF HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH SWNQLAGMANLAVQQAARATGLDKAAPALTSFLGVGTTAAAFGLAYRNTNQTYQAHARVR HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHH SAVASAQAPAAPATAPAPDGSSQATASGTGHTTQARQRHAAAQEIEESTDDDASVPPHGA HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC QARPTA CCCCCC >Mature Secondary Structure MLKNSTSAPSASPRHLLTSPGKETQPASSQPASPIVRAGSRRLPEMELQRLARPDAQAST CCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHCCCCCHHHH SAAASSTRPPRNDAPRAPVREMSLRYMADVEAQTDTPVPGRGARLLRQGRNLASRARNLA HHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH QSSMAQVRSGAATGAAYAGQAAMAVKDKAVQGYHYTAAKAQQGWEVTSQFTRQSAQDVVG HHHHHHHHHCCCCCHHHHCCHHHHHHHHHHCCCEEHHHHHHCCHHHHHHHHHHHHHHHHH DRLPSRAAVGAFAGHTVQQLLTCGIPTFSREYAMLQIYRGIVNSRFAQDNPFAIVGMQTA HCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHH VSMAAVLAHTKLRHARMDRDPEAAVKGHFGLTDAQWDAMSPQDKARHKEIQRADSRRVTA HHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHH NQVIAETGNFVMGATAAAGGDPSVSARVLATQVRNIIYAAMRELMQASLKFVDTRGPGTS HHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC GVNNANMSSMAAVYTLMTMGASTASDAVVGAVLNARSVSLSGLQFQVADTNNPVNDPQLE CCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCEEECCEEEEEECCCCCCCCCCHH NAALVALVRGLFNTAVEAIDAGVGKHYETKQVGARQVWNSGSKLPMKDHDRILDHSVARF HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH SWNQLAGMANLAVQQAARATGLDKAAPALTSFLGVGTTAAAFGLAYRNTNQTYQAHARVR HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHH SAVASAQAPAAPATAPAPDGSSQATASGTGHTTQARQRHAAAQEIEESTDDDASVPPHGA HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC QARPTA CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA