Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612587
Identifier: 120612587
GI number: 120612587
Start: 4373536
End: 4374501
Strand: Direct
Name: 120612587
Synonym: Aave_3948
Alternate gene names: NA
Gene position: 4373536-4374501 (Clockwise)
Preceding gene: 120612586
Following gene: 120612588
Centisome position: 81.71
GC content: 72.26
Gene sequence:
>966_bases ATGCAGACTATGTCGACCGCGCACACCACCGATCCATCTTCCACTCTCTCGTCCCCGTCGGCGGCGTGGCTGCGCGAAGC CGCATTGCAGTTCGGCGGGCCGGAAGGCGCGGAGCTTTTCGCCAGGGCGCTCGCTTTCGAACAGGACGGCGTCCGCTACA GCCCCCTGCTGATCCAGGACGCCCCGCAGGAACGCTGGGCGCTGGTGGCCTCGCTGCCCTGCCCCGCCGGCGTGGAAGAA CCCGTCTGGACGAGCCTGCTGCTGCACCTCAACGTACCGGCGATGGCGCTCGGCTCCATCGGGATCGGCATGGATCCTTG CGGCCGCGCCACGGTCCTTCAGGCCGTGCCGCCTTCCCATGTCGGCGACGCGGCGCTGCTCGCCCAGGGCCTGTTCCAGC TCGGCTACTTCAGCGGCATGCTGCGGGAGAGCGCGGGCGCGGTGCAGCGCAGCCTGTCCCCGATGATCGAAGCGCATGCC CTCCGCCAGGCCGGGAGCGCGCCCGGTCCGGAAGCCGCGCCGCCGGAAATGCCGCCGCTGCCGCCCGGCCTCGAAGCCGC CACGCAGGCACGGATCGATGCGGACTGGCACCGTCCCCTCATCCAGCAGGCACTGCAGGAACTCGGTGCCGGCAATGCGC AAGCCAGCGGCCTCCCGCTGGCAGGCAGCGCCAGGCTGCACGGGACGGACATCCAGATCGTGGCCTGCGGGGACGGCCGC ACCCTGCTGCTGTCCGCGCTGCTGGACAGGCCGCTGGCCGACAGCGCCGCGCGCATCGCGGCGCTGCAGGCCAACGTGGA ACTGATGGTGATCGCCGGCTGCGCCCTCGGCCTTTCGCCCGAGGGCACGCTCGTGCAGACACGCTGGGACTCCACCGGCA TGGACGGCGCCGGCCTGGCCGTCCAGCTGGACGGATTCGCCGCCCTCGCCGCCAGCATGTCCGGTGCGCGCCCCCCCGGG CAATGA
Upstream 100 bases:
>100_bases TGCGCCGGCCGGCGGCTTCGCATTCCGCGCGACTGCTTCGCCATGCAGCCCCCTGTCGTGCATGGATGTGTAAAAAATGT GCATGCCCAACGGGGGGCCC
Downstream 100 bases:
>100_bases CCCAGGACACAAGGAGTTCCCGATGCTGAAAAACTCCACCTCCGCGCCGAGCGCCTCGCCCCGGCACCTGCTGACCTCCC CGGGCAAGGAGACGCAGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 321; Mature: 321
Protein sequence:
>321_residues MQTMSTAHTTDPSSTLSSPSAAWLREAALQFGGPEGAELFARALAFEQDGVRYSPLLIQDAPQERWALVASLPCPAGVEE PVWTSLLLHLNVPAMALGSIGIGMDPCGRATVLQAVPPSHVGDAALLAQGLFQLGYFSGMLRESAGAVQRSLSPMIEAHA LRQAGSAPGPEAAPPEMPPLPPGLEAATQARIDADWHRPLIQQALQELGAGNAQASGLPLAGSARLHGTDIQIVACGDGR TLLLSALLDRPLADSAARIAALQANVELMVIAGCALGLSPEGTLVQTRWDSTGMDGAGLAVQLDGFAALAASMSGARPPG Q
Sequences:
>Translated_321_residues MQTMSTAHTTDPSSTLSSPSAAWLREAALQFGGPEGAELFARALAFEQDGVRYSPLLIQDAPQERWALVASLPCPAGVEE PVWTSLLLHLNVPAMALGSIGIGMDPCGRATVLQAVPPSHVGDAALLAQGLFQLGYFSGMLRESAGAVQRSLSPMIEAHA LRQAGSAPGPEAAPPEMPPLPPGLEAATQARIDADWHRPLIQQALQELGAGNAQASGLPLAGSARLHGTDIQIVACGDGR TLLLSALLDRPLADSAARIAALQANVELMVIAGCALGLSPEGTLVQTRWDSTGMDGAGLAVQLDGFAALAASMSGARPPG Q >Mature_321_residues MQTMSTAHTTDPSSTLSSPSAAWLREAALQFGGPEGAELFARALAFEQDGVRYSPLLIQDAPQERWALVASLPCPAGVEE PVWTSLLLHLNVPAMALGSIGIGMDPCGRATVLQAVPPSHVGDAALLAQGLFQLGYFSGMLRESAGAVQRSLSPMIEAHA LRQAGSAPGPEAAPPEMPPLPPGLEAATQARIDADWHRPLIQQALQELGAGNAQASGLPLAGSARLHGTDIQIVACGDGR TLLLSALLDRPLADSAARIAALQANVELMVIAGCALGLSPEGTLVQTRWDSTGMDGAGLAVQLDGFAALAASMSGARPPG Q
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32975; Mature: 32975
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTMSTAHTTDPSSTLSSPSAAWLREAALQFGGPEGAELFARALAFEQDGVRYSPLLIQD CCCCCCCCCCCCHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEECCEEEEC APQERWALVASLPCPAGVEEPVWTSLLLHLNVPAMALGSIGIGMDPCGRATVLQAVPPSH CCHHHEEEEEECCCCCCCCCHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCEEEECCCCCC VGDAALLAQGLFQLGYFSGMLRESAGAVQRSLSPMIEAHALRQAGSAPGPEAAPPEMPPL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC PPGLEAATQARIDADWHRPLIQQALQELGAGNAQASGLPLAGSARLHGTDIQIVACGDGR CCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCEEEEEEECCCH TLLLSALLDRPLADSAARIAALQANVELMVIAGCALGLSPEGTLVQTRWDSTGMDGAGLA HHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEEEEHCCCCCCCCEEEEECCCCCCCCCCEE VQLDGFAALAASMSGARPPGQ EEECHHHHHHHHHCCCCCCCC >Mature Secondary Structure MQTMSTAHTTDPSSTLSSPSAAWLREAALQFGGPEGAELFARALAFEQDGVRYSPLLIQD CCCCCCCCCCCCHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEECCEEEEC APQERWALVASLPCPAGVEEPVWTSLLLHLNVPAMALGSIGIGMDPCGRATVLQAVPPSH CCHHHEEEEEECCCCCCCCCHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCEEEECCCCCC VGDAALLAQGLFQLGYFSGMLRESAGAVQRSLSPMIEAHALRQAGSAPGPEAAPPEMPPL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC PPGLEAATQARIDADWHRPLIQQALQELGAGNAQASGLPLAGSARLHGTDIQIVACGDGR CCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCEEEEEEECCCH TLLLSALLDRPLADSAARIAALQANVELMVIAGCALGLSPEGTLVQTRWDSTGMDGAGLA HHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEEEEHCCCCCCCCEEEEECCCCCCCCCCEE VQLDGFAALAASMSGARPPGQ EEECHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA