Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

Click here to switch to the map view.

The map label for this gene is 120612587

Identifier: 120612587

GI number: 120612587

Start: 4373536

End: 4374501

Strand: Direct

Name: 120612587

Synonym: Aave_3948

Alternate gene names: NA

Gene position: 4373536-4374501 (Clockwise)

Preceding gene: 120612586

Following gene: 120612588

Centisome position: 81.71

GC content: 72.26

Gene sequence:

>966_bases
ATGCAGACTATGTCGACCGCGCACACCACCGATCCATCTTCCACTCTCTCGTCCCCGTCGGCGGCGTGGCTGCGCGAAGC
CGCATTGCAGTTCGGCGGGCCGGAAGGCGCGGAGCTTTTCGCCAGGGCGCTCGCTTTCGAACAGGACGGCGTCCGCTACA
GCCCCCTGCTGATCCAGGACGCCCCGCAGGAACGCTGGGCGCTGGTGGCCTCGCTGCCCTGCCCCGCCGGCGTGGAAGAA
CCCGTCTGGACGAGCCTGCTGCTGCACCTCAACGTACCGGCGATGGCGCTCGGCTCCATCGGGATCGGCATGGATCCTTG
CGGCCGCGCCACGGTCCTTCAGGCCGTGCCGCCTTCCCATGTCGGCGACGCGGCGCTGCTCGCCCAGGGCCTGTTCCAGC
TCGGCTACTTCAGCGGCATGCTGCGGGAGAGCGCGGGCGCGGTGCAGCGCAGCCTGTCCCCGATGATCGAAGCGCATGCC
CTCCGCCAGGCCGGGAGCGCGCCCGGTCCGGAAGCCGCGCCGCCGGAAATGCCGCCGCTGCCGCCCGGCCTCGAAGCCGC
CACGCAGGCACGGATCGATGCGGACTGGCACCGTCCCCTCATCCAGCAGGCACTGCAGGAACTCGGTGCCGGCAATGCGC
AAGCCAGCGGCCTCCCGCTGGCAGGCAGCGCCAGGCTGCACGGGACGGACATCCAGATCGTGGCCTGCGGGGACGGCCGC
ACCCTGCTGCTGTCCGCGCTGCTGGACAGGCCGCTGGCCGACAGCGCCGCGCGCATCGCGGCGCTGCAGGCCAACGTGGA
ACTGATGGTGATCGCCGGCTGCGCCCTCGGCCTTTCGCCCGAGGGCACGCTCGTGCAGACACGCTGGGACTCCACCGGCA
TGGACGGCGCCGGCCTGGCCGTCCAGCTGGACGGATTCGCCGCCCTCGCCGCCAGCATGTCCGGTGCGCGCCCCCCCGGG
CAATGA

Upstream 100 bases:

>100_bases
TGCGCCGGCCGGCGGCTTCGCATTCCGCGCGACTGCTTCGCCATGCAGCCCCCTGTCGTGCATGGATGTGTAAAAAATGT
GCATGCCCAACGGGGGGCCC

Downstream 100 bases:

>100_bases
CCCAGGACACAAGGAGTTCCCGATGCTGAAAAACTCCACCTCCGCGCCGAGCGCCTCGCCCCGGCACCTGCTGACCTCCC
CGGGCAAGGAGACGCAGCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 321; Mature: 321

Protein sequence:

>321_residues
MQTMSTAHTTDPSSTLSSPSAAWLREAALQFGGPEGAELFARALAFEQDGVRYSPLLIQDAPQERWALVASLPCPAGVEE
PVWTSLLLHLNVPAMALGSIGIGMDPCGRATVLQAVPPSHVGDAALLAQGLFQLGYFSGMLRESAGAVQRSLSPMIEAHA
LRQAGSAPGPEAAPPEMPPLPPGLEAATQARIDADWHRPLIQQALQELGAGNAQASGLPLAGSARLHGTDIQIVACGDGR
TLLLSALLDRPLADSAARIAALQANVELMVIAGCALGLSPEGTLVQTRWDSTGMDGAGLAVQLDGFAALAASMSGARPPG
Q

Sequences:

>Translated_321_residues
MQTMSTAHTTDPSSTLSSPSAAWLREAALQFGGPEGAELFARALAFEQDGVRYSPLLIQDAPQERWALVASLPCPAGVEE
PVWTSLLLHLNVPAMALGSIGIGMDPCGRATVLQAVPPSHVGDAALLAQGLFQLGYFSGMLRESAGAVQRSLSPMIEAHA
LRQAGSAPGPEAAPPEMPPLPPGLEAATQARIDADWHRPLIQQALQELGAGNAQASGLPLAGSARLHGTDIQIVACGDGR
TLLLSALLDRPLADSAARIAALQANVELMVIAGCALGLSPEGTLVQTRWDSTGMDGAGLAVQLDGFAALAASMSGARPPG
Q
>Mature_321_residues
MQTMSTAHTTDPSSTLSSPSAAWLREAALQFGGPEGAELFARALAFEQDGVRYSPLLIQDAPQERWALVASLPCPAGVEE
PVWTSLLLHLNVPAMALGSIGIGMDPCGRATVLQAVPPSHVGDAALLAQGLFQLGYFSGMLRESAGAVQRSLSPMIEAHA
LRQAGSAPGPEAAPPEMPPLPPGLEAATQARIDADWHRPLIQQALQELGAGNAQASGLPLAGSARLHGTDIQIVACGDGR
TLLLSALLDRPLADSAARIAALQANVELMVIAGCALGLSPEGTLVQTRWDSTGMDGAGLAVQLDGFAALAASMSGARPPG
Q

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32975; Mature: 32975

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTMSTAHTTDPSSTLSSPSAAWLREAALQFGGPEGAELFARALAFEQDGVRYSPLLIQD
CCCCCCCCCCCCHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEECCEEEEC
APQERWALVASLPCPAGVEEPVWTSLLLHLNVPAMALGSIGIGMDPCGRATVLQAVPPSH
CCHHHEEEEEECCCCCCCCCHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCEEEECCCCCC
VGDAALLAQGLFQLGYFSGMLRESAGAVQRSLSPMIEAHALRQAGSAPGPEAAPPEMPPL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PPGLEAATQARIDADWHRPLIQQALQELGAGNAQASGLPLAGSARLHGTDIQIVACGDGR
CCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCEEEEEEECCCH
TLLLSALLDRPLADSAARIAALQANVELMVIAGCALGLSPEGTLVQTRWDSTGMDGAGLA
HHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEEEEHCCCCCCCCEEEEECCCCCCCCCCEE
VQLDGFAALAASMSGARPPGQ
EEECHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MQTMSTAHTTDPSSTLSSPSAAWLREAALQFGGPEGAELFARALAFEQDGVRYSPLLIQD
CCCCCCCCCCCCHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEECCEEEEC
APQERWALVASLPCPAGVEEPVWTSLLLHLNVPAMALGSIGIGMDPCGRATVLQAVPPSH
CCHHHEEEEEECCCCCCCCCHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCEEEECCCCCC
VGDAALLAQGLFQLGYFSGMLRESAGAVQRSLSPMIEAHALRQAGSAPGPEAAPPEMPPL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PPGLEAATQARIDADWHRPLIQQALQELGAGNAQASGLPLAGSARLHGTDIQIVACGDGR
CCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCEEEEEEECCCH
TLLLSALLDRPLADSAARIAALQANVELMVIAGCALGLSPEGTLVQTRWDSTGMDGAGLA
HHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEEEEHCCCCCCCCEEEEECCCCCCCCCCEE
VQLDGFAALAASMSGARPPGQ
EEECHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA