Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

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The map label for this gene is pcaI [H]

Identifier: 120612585

GI number: 120612585

Start: 4371702

End: 4372403

Strand: Reverse

Name: pcaI [H]

Synonym: Aave_3946

Alternate gene names: 120612585

Gene position: 4372403-4371702 (Counterclockwise)

Preceding gene: 120612590

Following gene: 120612584

Centisome position: 81.68

GC content: 69.37

Gene sequence:

>702_bases
ATGATCAACAAGATTGCGGATTCCGTCGCCCAGGCCCTGTCGGGCATCCAGGACGGCGCCACGGTGCTCGTCGGCGGCTT
CGGCACGGCCGGCATTCCCGGCGAACTGATCGACGGACTGATCGAGCAGGGCGCCCGTGACCTCACGGTGGTCAACAACA
ACGCCGGCAACGGCGACACGGGCCTGGCCGCGCTGCTCAAGACGGGCCGCGTGCGCAAGATCATCTGCAGCTTCCCCCGG
CAGGTGGATAGCTGGGTGTTCGACGATCTGTACCGCTCCGGCAAGCTGGAGCTGGAACTGGTGCCGCAGGGCAACCTCGC
CGAGCGCCTGCGCGCGGCCGGGGCCGGCATCGGCGCCTTTTTCTGCCCGACGGCCTACGGCACCGAGCTGGCGAAGGGCA
AGGAAACGCGCGAGATCGGCGGCAGGCATTACGTGCTGGAGTACCCCATCCACGGCGACGTGGCCCTCGTCAAGGCCGAG
CGGGGCGACCGCTGGGGCAACCTGACCTACCGCATGTCCGCGCGCAATTTCGGCCCCGTGATGGCCACGGCCGCGAGGCA
GACCATCGCCACGGTGCACGAGATCGCGGAGCTGGGCGCGCTGGACCCCGAGGCCATCGTGACCCCCGGCATCTTCGTGA
GCCGCATCGTGCGCATCGAGCGCACCGCCACCCAGGGCGCGGGCTTCAGGAAGCCTGCCTGA

Upstream 100 bases:

>100_bases
TTCGCAACCGGGCAGCCGGTTGCCTCCCGCTCGCGGGGCCGGATTGTCGCCGTGCGGCACCGCGGTCCGGCCTTTGCTCC
CCTTCCAGGTTTTTCTTCCC

Downstream 100 bases:

>100_bases
GCCCGGCATCGCATCGGAATTGAACAGGCCACCAGCGCAGAAGGAATCAGCGTGAGCAGCTATCAGAAACGCAGCAAAGA
CGAACTGGCCCGGCGTGTGG

Product: 3-oxoacid CoA-transferase subunit A

Products: NA

Alternate protein names: Beta-ketoadipate:succinyl-CoA transferase subunit A [H]

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MINKIADSVAQALSGIQDGATVLVGGFGTAGIPGELIDGLIEQGARDLTVVNNNAGNGDTGLAALLKTGRVRKIICSFPR
QVDSWVFDDLYRSGKLELELVPQGNLAERLRAAGAGIGAFFCPTAYGTELAKGKETREIGGRHYVLEYPIHGDVALVKAE
RGDRWGNLTYRMSARNFGPVMATAARQTIATVHEIAELGALDPEAIVTPGIFVSRIVRIERTATQGAGFRKPA

Sequences:

>Translated_233_residues
MINKIADSVAQALSGIQDGATVLVGGFGTAGIPGELIDGLIEQGARDLTVVNNNAGNGDTGLAALLKTGRVRKIICSFPR
QVDSWVFDDLYRSGKLELELVPQGNLAERLRAAGAGIGAFFCPTAYGTELAKGKETREIGGRHYVLEYPIHGDVALVKAE
RGDRWGNLTYRMSARNFGPVMATAARQTIATVHEIAELGALDPEAIVTPGIFVSRIVRIERTATQGAGFRKPA
>Mature_233_residues
MINKIADSVAQALSGIQDGATVLVGGFGTAGIPGELIDGLIEQGARDLTVVNNNAGNGDTGLAALLKTGRVRKIICSFPR
QVDSWVFDDLYRSGKLELELVPQGNLAERLRAAGAGIGAFFCPTAYGTELAKGKETREIGGRHYVLEYPIHGDVALVKAE
RGDRWGNLTYRMSARNFGPVMATAARQTIATVHEIAELGALDPEAIVTPGIFVSRIVRIERTATQGAGFRKPA

Specific function: SHORT-CHAIN FATTY ACIDS METABOLISM. [C]

COG id: COG1788

COG function: function code I; Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 3-oxoacid CoA-transferase subunit A family [H]

Homologues:

Organism=Homo sapiens, GI4557817, Length=229, Percent_Identity=44.9781659388646, Blast_Score=193, Evalue=1e-49,
Organism=Homo sapiens, GI11545841, Length=241, Percent_Identity=43.9834024896266, Blast_Score=171, Evalue=4e-43,
Organism=Escherichia coli, GI1788551, Length=205, Percent_Identity=42.9268292682927, Blast_Score=172, Evalue=2e-44,
Organism=Caenorhabditis elegans, GI17531517, Length=252, Percent_Identity=40.8730158730159, Blast_Score=179, Evalue=1e-45,
Organism=Drosophila melanogaster, GI24655794, Length=233, Percent_Identity=41.6309012875536, Blast_Score=181, Evalue=4e-46,
Organism=Drosophila melanogaster, GI21358325, Length=233, Percent_Identity=41.6309012875536, Blast_Score=181, Evalue=4e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012792
- InterPro:   IPR004165
- InterPro:   IPR004163 [H]

Pfam domain/function: PF01144 CoA_trans [H]

EC number: =2.8.3.6 [H]

Molecular weight: Translated: 24761; Mature: 24761

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: PS01273 COA_TRANSF_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINKIADSVAQALSGIQDGATVLVGGFGTAGIPGELIDGLIEQGARDLTVVNNNAGNGDT
CCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCHH
GLAALLKTGRVRKIICSFPRQVDSWVFDDLYRSGKLELELVPQGNLAERLRAAGAGIGAF
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHCCCCCHH
FCPTAYGTELAKGKETREIGGRHYVLEYPIHGDVALVKAERGDRWGNLTYRMSARNFGPV
HCCCHHCHHHHCCCHHHHCCCEEEEEEECCCCCEEEEEECCCCCCCCEEEEECCCCCCHH
MATAARQTIATVHEIAELGALDPEAIVTPGIFVSRIVRIERTATQGAGFRKPA
HHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MINKIADSVAQALSGIQDGATVLVGGFGTAGIPGELIDGLIEQGARDLTVVNNNAGNGDT
CCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCHH
GLAALLKTGRVRKIICSFPRQVDSWVFDDLYRSGKLELELVPQGNLAERLRAAGAGIGAF
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHCCCCCHH
FCPTAYGTELAKGKETREIGGRHYVLEYPIHGDVALVKAERGDRWGNLTYRMSARNFGPV
HCCCHHCHHHHCCCHHHHCCCEEEEEEECCCCCEEEEEECCCCCCCCEEEEECCCCCCHH
MATAARQTIATVHEIAELGALDPEAIVTPGIFVSRIVRIERTATQGAGFRKPA
HHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1624453; 6780551 [H]