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The map label for this gene is cc4 [H]

Identifier: 120612590

GI number: 120612590

Start: 4377242

End: 4377907

Strand: Reverse

Name: cc4 [H]

Synonym: Aave_3951

Alternate gene names: 120612590

Gene position: 4377907-4377242 (Counterclockwise)

Preceding gene: 120612596

Following gene: 120612585

Centisome position: 81.79

GC content: 67.57

Gene sequence:

>666_bases
ATGAACAAGAAGTTGACCACGATATTCGCCGTCGCTGTCGCTTGCGTGACCGCGGTGGCGCATGCCCAGGACGTCAAGGG
AGACGTGAAGGCCGGGGAAGGCAAGATCGCCATGTGCATCGGCTGCCACGGCATCCCGGGCTACCAGGCGAGCTTCCCCG
AGGTGTACAAGGTGCCGATGATCTCGGGCCAGAACGCCGGCTACATCGCCTCGGCGCTGCAGGCCTACAAGAAGGGCGAC
CGCAGGCACCCGACCATGCGCGGCATCGCCGATTCCCTCTCCGACCAGGACATCGCCGACGTGTCGGCCTACTACGCCGG
CCAGGCCCGCCAGGGTGGCGCGCCCGCCAAGGCCTCGCGCGAGCCGAGCGCCCAGGTGGCGCAGCTGCTGCAGAAGGGCG
CCTGCGTGTCCTGCCACGGGGAGAACTTCTCCAAGCCCATCGATCCGTCCTACCCGAAGATCGCGGGCCAGCACCCCGAC
TACCTGTTCGCCGCGCTCAAGGCCTACAAGACGGGCGGCCCCGCCGCGGCCGCCGTGGGCCGCTCCAACGCGATCATGGC
GGGCATCGCCAAGCAGTTCTCCAATGCCGAGCTCAAGGCCCTGTCCGGATATCTGGGTTCGCTCGACGGTGAATTGCAGG
TGGTGCGGCAATCGGGCTTCCGCTGA

Upstream 100 bases:

>100_bases
GGCGGTGAGGGTAATCGTTGATAAATGGCCGGAAGGGGCGCTGGCTATAATCATTTTGGCCCCCGAGCACCGACAAACTC
CATTGGATTGTGCGCGCAAA

Downstream 100 bases:

>100_bases
GTTTCGCGCCGCGGGCGCATATTCCAGGGTATTTACCCATTTCCTTTTTCGGGAAAATGCCGTTGATTAATTGCGGCGGG
TGAAGCCGCGGTGCCGCTCA

Product: class I cytochrome c

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MNKKLTTIFAVAVACVTAVAHAQDVKGDVKAGEGKIAMCIGCHGIPGYQASFPEVYKVPMISGQNAGYIASALQAYKKGD
RRHPTMRGIADSLSDQDIADVSAYYAGQARQGGAPAKASREPSAQVAQLLQKGACVSCHGENFSKPIDPSYPKIAGQHPD
YLFAALKAYKTGGPAAAAVGRSNAIMAGIAKQFSNAELKALSGYLGSLDGELQVVRQSGFR

Sequences:

>Translated_221_residues
MNKKLTTIFAVAVACVTAVAHAQDVKGDVKAGEGKIAMCIGCHGIPGYQASFPEVYKVPMISGQNAGYIASALQAYKKGD
RRHPTMRGIADSLSDQDIADVSAYYAGQARQGGAPAKASREPSAQVAQLLQKGACVSCHGENFSKPIDPSYPKIAGQHPD
YLFAALKAYKTGGPAAAAVGRSNAIMAGIAKQFSNAELKALSGYLGSLDGELQVVRQSGFR
>Mature_221_residues
MNKKLTTIFAVAVACVTAVAHAQDVKGDVKAGEGKIAMCIGCHGIPGYQASFPEVYKVPMISGQNAGYIASALQAYKKGD
RRHPTMRGIADSLSDQDIADVSAYYAGQARQGGAPAKASREPSAQVAQLLQKGACVSCHGENFSKPIDPSYPKIAGQHPD
YLFAALKAYKTGGPAAAAVGRSNAIMAGIAKQFSNAELKALSGYLGSLDGELQVVRQSGFR

Specific function: Diheme, high potential cytochrome c believed to be an intermediate electron donor to terminal oxidation systems [H]

COG id: COG2863

COG function: function code C; Cytochrome c553

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 23050; Mature: 23050

Theoretical pI: Translated: 9.47; Mature: 9.47

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKKLTTIFAVAVACVTAVAHAQDVKGDVKAGEGKIAMCIGCHGIPGYQASFPEVYKVPM
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEECCC
ISGQNAGYIASALQAYKKGDRRHPTMRGIADSLSDQDIADVSAYYAGQARQGGAPAKASR
CCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCC
EPSAQVAQLLQKGACVSCHGENFSKPIDPSYPKIAGQHPDYLFAALKAYKTGGPAAAAVG
CCHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHC
RSNAIMAGIAKQFSNAELKALSGYLGSLDGELQVVRQSGFR
CCCHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHCCCC
>Mature Secondary Structure
MNKKLTTIFAVAVACVTAVAHAQDVKGDVKAGEGKIAMCIGCHGIPGYQASFPEVYKVPM
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEECCC
ISGQNAGYIASALQAYKKGDRRHPTMRGIADSLSDQDIADVSAYYAGQARQGGAPAKASR
CCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCC
EPSAQVAQLLQKGACVSCHGENFSKPIDPSYPKIAGQHPDYLFAALKAYKTGGPAAAAVG
CCHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHC
RSNAIMAGIAKQFSNAELKALSGYLGSLDGELQVVRQSGFR
CCCHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8026750; 9032080 [H]