Click here to switch to the map view.

The map label for this gene is 120612581

Identifier: 120612581

GI number: 120612581

Start: 4367868

End: 4368938

Strand: Reverse

Name: 120612581

Synonym: Aave_3942

Alternate gene names: NA

Gene position: 4368938-4367868 (Counterclockwise)

Preceding gene: 120612582

Following gene: 120612580

Centisome position: 81.62

GC content: 72.36

Gene sequence:

>1071_bases
ATGGAACAGCGACAGCCTTCCAACCCCCGCTGGAAACACCGTCCGCCCGGCTCCACCTGGGGCGATTTCGGGCCGGACGA
CCAACTGGGCCGCCTGAACCTGCTCACGCCCGAGAAGGTGCGCCAGGGCGTGGCCGAGGTGCGCGAGGGCCTGGCGTTCG
CGCTCAGCCTGCCGCTGGACTATCCCGGCGGCAGCGCGCTCAACCCGGCCCGCCACCCGCCCGTGCTGCGGCCATCGGTG
CGCAAGGGGCTGGTCAACTTCAACTGCCTGCTGGCGGAGCTGGAGCCGGGCCGCACCGACGTGATGTCCGACGACCTGGC
CATCCTGTACCTGCAGTATTCGACGCAATGGGACAGCCTGGCCCATGCCGGATCGCTGTTCGACGCCAACGGCGACGGCC
TGCCCGAGGCGCTCTACTACAACGGCTATGCGGCGGGACGGCACATCGTCGGCCCGCGGGACCTGCGCGACACGGGCGTG
CCGGCCGCCACGGACGCGGCCGGCAGCACCTCGGCCGCCCATGCTTTGGGCATCGAGGGCATGGCGCGCACGGGCGTGCA
GGGCCGCGGCGTGATGATCGACCTGCGCGCCCACCTGGGCGACGCGCGCACGCTGGTCGGCTACGACACGCTGATGCGCG
TGCTCGAAGCCGATGGCGTGGTGGTGGAGGAGGGCGACATCGTCTGCCTGCACACGGGCTTCGCCGAGGTGGTGCTGGGC
ATGCGCCGTCATCCCGACCCGCAGGTGCTGCACAACGCATGCGCGGTGCTGGACGGCCGCGACGAGAAGCTGCTGCAGTG
GATCACCGACAGCCAGCTCGCCGCCATCGCGGCCGACAACTACGCCGTCGAAGGGCTGCCCGCGCGCCCGGGGCCGGCCT
GCTGCGCGGCGCTGCCGCTGCACGAGCACTGCCTGTTCAAGCTGGGCGTGCACCTGGGCGAGCTGTGGCACCTCACGCCG
CTGGCGCGCTGGCTGCGCGAGCACGCCCGCCACCGTTTCCTGCTGACGGCGCCGCCGCTGAACCTGCCCGGCGCCGTGGG
TTCGCCCGTGACGCCGGTCGCCACGGTCTGA

Upstream 100 bases:

>100_bases
TTGGCCGAGTTGCCGGCGTCGCACCTGTCGAACCTCGAAGCGCCGCAGGCCTTCGATGCCGCGCTCGCGGAATTTCTGCA
GAGGGACTAGGACCGCATCC

Downstream 100 bases:

>100_bases
AACCCATCGCCTGCATCCGGGGCCGGAGCCCCGGACGCCGCCCGATCCGCATCCACAGCCGCCGGGCCACCGGCGGTCGC
CATGTGCCGGCCCGCCGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: Cyclase Family Protein; Metal-Dependent Hydrolase; Yclase SCIF3.09c; Conserved Protein; Metal-Dependent Cyclase Family Protein

Number of amino acids: Translated: 356; Mature: 356

Protein sequence:

>356_residues
MEQRQPSNPRWKHRPPGSTWGDFGPDDQLGRLNLLTPEKVRQGVAEVREGLAFALSLPLDYPGGSALNPARHPPVLRPSV
RKGLVNFNCLLAELEPGRTDVMSDDLAILYLQYSTQWDSLAHAGSLFDANGDGLPEALYYNGYAAGRHIVGPRDLRDTGV
PAATDAAGSTSAAHALGIEGMARTGVQGRGVMIDLRAHLGDARTLVGYDTLMRVLEADGVVVEEGDIVCLHTGFAEVVLG
MRRHPDPQVLHNACAVLDGRDEKLLQWITDSQLAAIAADNYAVEGLPARPGPACCAALPLHEHCLFKLGVHLGELWHLTP
LARWLREHARHRFLLTAPPLNLPGAVGSPVTPVATV

Sequences:

>Translated_356_residues
MEQRQPSNPRWKHRPPGSTWGDFGPDDQLGRLNLLTPEKVRQGVAEVREGLAFALSLPLDYPGGSALNPARHPPVLRPSV
RKGLVNFNCLLAELEPGRTDVMSDDLAILYLQYSTQWDSLAHAGSLFDANGDGLPEALYYNGYAAGRHIVGPRDLRDTGV
PAATDAAGSTSAAHALGIEGMARTGVQGRGVMIDLRAHLGDARTLVGYDTLMRVLEADGVVVEEGDIVCLHTGFAEVVLG
MRRHPDPQVLHNACAVLDGRDEKLLQWITDSQLAAIAADNYAVEGLPARPGPACCAALPLHEHCLFKLGVHLGELWHLTP
LARWLREHARHRFLLTAPPLNLPGAVGSPVTPVATV
>Mature_356_residues
MEQRQPSNPRWKHRPPGSTWGDFGPDDQLGRLNLLTPEKVRQGVAEVREGLAFALSLPLDYPGGSALNPARHPPVLRPSV
RKGLVNFNCLLAELEPGRTDVMSDDLAILYLQYSTQWDSLAHAGSLFDANGDGLPEALYYNGYAAGRHIVGPRDLRDTGV
PAATDAAGSTSAAHALGIEGMARTGVQGRGVMIDLRAHLGDARTLVGYDTLMRVLEADGVVVEEGDIVCLHTGFAEVVLG
MRRHPDPQVLHNACAVLDGRDEKLLQWITDSQLAAIAADNYAVEGLPARPGPACCAALPLHEHCLFKLGVHLGELWHLTP
LARWLREHARHRFLLTAPPLNLPGAVGSPVTPVATV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38351; Mature: 38351

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQRQPSNPRWKHRPPGSTWGDFGPDDQLGRLNLLTPEKVRQGVAEVREGLAFALSLPLD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHCCEEEEECCCC
YPGGSALNPARHPPVLRPSVRKGLVNFNCLLAELEPGRTDVMSDDLAILYLQYSTQWDSL
CCCCCCCCCCCCCCCCCHHHHHCCCCEEEEEEECCCCCCCCCCCCEEEEEEEECCCHHHH
AHAGSLFDANGDGLPEALYYNGYAAGRHIVGPRDLRDTGVPAATDAAGSTSAAHALGIEG
HHCCCEECCCCCCCCHHHEECCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHCCCC
MARTGVQGRGVMIDLRAHLGDARTLVGYDTLMRVLEADGVVVEEGDIVCLHTGFAEVVLG
HHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEECCCEEEEECCHHHHHHH
MRRHPDPQVLHNACAVLDGRDEKLLQWITDSQLAAIAADNYAVEGLPARPGPACCAALPL
HHCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEEECCEEECCCCCCCCCHHEEECCH
HEHCLFKLGVHLGELWHLTPLARWLREHARHRFLLTAPPLNLPGAVGSPVTPVATV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MEQRQPSNPRWKHRPPGSTWGDFGPDDQLGRLNLLTPEKVRQGVAEVREGLAFALSLPLD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHCCEEEEECCCC
YPGGSALNPARHPPVLRPSVRKGLVNFNCLLAELEPGRTDVMSDDLAILYLQYSTQWDSL
CCCCCCCCCCCCCCCCCHHHHHCCCCEEEEEEECCCCCCCCCCCCEEEEEEEECCCHHHH
AHAGSLFDANGDGLPEALYYNGYAAGRHIVGPRDLRDTGVPAATDAAGSTSAAHALGIEG
HHCCCEECCCCCCCCHHHEECCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHCCCC
MARTGVQGRGVMIDLRAHLGDARTLVGYDTLMRVLEADGVVVEEGDIVCLHTGFAEVVLG
HHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEECCCEEEEECCHHHHHHH
MRRHPDPQVLHNACAVLDGRDEKLLQWITDSQLAAIAADNYAVEGLPARPGPACCAALPL
HHCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEEECCEEECCCCCCCCCHHEEECCH
HEHCLFKLGVHLGELWHLTPLARWLREHARHRFLLTAPPLNLPGAVGSPVTPVATV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA