Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is catD [H]
Identifier: 120612582
GI number: 120612582
Start: 4368949
End: 4369746
Strand: Reverse
Name: catD [H]
Synonym: Aave_3943
Alternate gene names: 120612582
Gene position: 4369746-4368949 (Counterclockwise)
Preceding gene: 120612583
Following gene: 120612581
Centisome position: 81.64
GC content: 74.31
Gene sequence:
>798_bases ATGACCGGCGAAACGCTGCAGACCGCCGCCGGGAGCTTCCGCGTACGGGTCGAAGGGCCCGCGGGCGCGCCGGCGCTGGT GTTGTCCAATTCGCTGGGCACCACGCTGGAGATGTGGGATGCGCAGGCCGAACGATTCGCCCGCACGCACCGCGTGGTGC GCTACGACACGCGCGGCCATGGCGGCAGCGTGGTGTCGCCGGGGCCCTATACGTTCGACCAGCTCGGCGGCGACGTGGTC GCGCTGCTCGATGCCCTGGGCATCGCCCGGGCGAGCTTCTGCGGCATCTCCATGGGCGGCCTCACGGGCCTCTGGCTGGG CGTGAACGCGCCGCAACGCCTGGAGCGCCTCGTGGTGGCCAACAGCGCCGCGAAGATCGGCACGGCCGACGGCTGGGCCG CCCGCGCCGCGCTGGTGCGCGAGAAGGGCGCGGCCGGCATGGCCGAACTCGCGGCCTCGGCGCCGGGGCGCTGGTTCACC GATGCCTTCGCCGCCGCGCAGCCCGAGGTGGTGCGGCGCGCCCAGGGCTGGGTGGCCGGCATCGCGCCGGAAGGCTATGC CGCCTGCTGCGAAGCGCTGGCGCAGGCCGACCTGCGCGGCGCGATCGGCGCCATCGGCGTGCCCACGCTGCTCGTCGCCG GCCAGGCCGACCCGGTCACCACGGTGGCGGATGCGCGGGCCATGCAGGCCGGCATCGCTGGCGCGGAGTTGGCCGAGTTG CCGGCGTCGCACCTGTCGAACCTCGAAGCGCCGCAGGCCTTCGATGCCGCGCTCGCGGAATTTCTGCAGAGGGACTAG
Upstream 100 bases:
>100_bases GGCTGCATGCCACGGGCGGGCGCTATGCGCTGTGCACGATGTGCATCGGCGTGGGGCAGGGCATCGCCGTGATCCTGGAG CGCGTGTGAGCGGGGGGGCC
Downstream 100 bases:
>100_bases GACCGCATCCATGGAACAGCGACAGCCTTCCAACCCCCGCTGGAAACACCGTCCGCCCGGCTCCACCTGGGGCGATTTCG GGCCGGACGACCAACTGGGC
Product: 3-oxoadipate enol-lactonase
Products: NA
Alternate protein names: 3-oxoadipate enol-lactonase II; Beta-ketoadipate enol-lactone hydrolase II; Enol-lactone hydrolase II [H]
Number of amino acids: Translated: 265; Mature: 264
Protein sequence:
>265_residues MTGETLQTAAGSFRVRVEGPAGAPALVLSNSLGTTLEMWDAQAERFARTHRVVRYDTRGHGGSVVSPGPYTFDQLGGDVV ALLDALGIARASFCGISMGGLTGLWLGVNAPQRLERLVVANSAAKIGTADGWAARAALVREKGAAGMAELAASAPGRWFT DAFAAAQPEVVRRAQGWVAGIAPEGYAACCEALAQADLRGAIGAIGVPTLLVAGQADPVTTVADARAMQAGIAGAELAEL PASHLSNLEAPQAFDAALAEFLQRD
Sequences:
>Translated_265_residues MTGETLQTAAGSFRVRVEGPAGAPALVLSNSLGTTLEMWDAQAERFARTHRVVRYDTRGHGGSVVSPGPYTFDQLGGDVV ALLDALGIARASFCGISMGGLTGLWLGVNAPQRLERLVVANSAAKIGTADGWAARAALVREKGAAGMAELAASAPGRWFT DAFAAAQPEVVRRAQGWVAGIAPEGYAACCEALAQADLRGAIGAIGVPTLLVAGQADPVTTVADARAMQAGIAGAELAEL PASHLSNLEAPQAFDAALAEFLQRD >Mature_264_residues TGETLQTAAGSFRVRVEGPAGAPALVLSNSLGTTLEMWDAQAERFARTHRVVRYDTRGHGGSVVSPGPYTFDQLGGDVVA LLDALGIARASFCGISMGGLTGLWLGVNAPQRLERLVVANSAAKIGTADGWAARAALVREKGAAGMAELAASAPGRWFTD AFAAAQPEVVRRAQGWVAGIAPEGYAACCEALAQADLRGAIGAIGVPTLLVAGQADPVTTVADARAMQAGIAGAELAELP ASHLSNLEAPQAFDAALAEFLQRD
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR012790 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =3.1.1.24 [H]
Molecular weight: Translated: 27120; Mature: 26989
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGETLQTAAGSFRVRVEGPAGAPALVLSNSLGTTLEMWDAQAERFARTHRVVRYDTRGH CCCCHHHHCCCCEEEEEECCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHEEEECCCC GGSVVSPGPYTFDQLGGDVVALLDALGIARASFCGISMGGLTGLWLGVNAPQRLERLVVA CCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHH NSAAKIGTADGWAARAALVREKGAAGMAELAASAPGRWFTDAFAAAQPEVVRRAQGWVAG CCCHHCCCCCCHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHCCHHHHHHHCCCEEE IAPEGYAACCEALAQADLRGAIGAIGVPTLLVAGQADPVTTVADARAMQAGIAGAELAEL CCCCCHHHHHHHHHHHHHHHHHHHCCHHHEEEECCCCCCHHHHHHHHHHHCCCHHHHHHC PASHLSNLEAPQAFDAALAEFLQRD CHHHHCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure TGETLQTAAGSFRVRVEGPAGAPALVLSNSLGTTLEMWDAQAERFARTHRVVRYDTRGH CCCHHHHCCCCEEEEEECCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHEEEECCCC GGSVVSPGPYTFDQLGGDVVALLDALGIARASFCGISMGGLTGLWLGVNAPQRLERLVVA CCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHH NSAAKIGTADGWAARAALVREKGAAGMAELAASAPGRWFTDAFAAAQPEVVRRAQGWVAG CCCHHCCCCCCHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHCCHHHHHHHCCCEEE IAPEGYAACCEALAQADLRGAIGAIGVPTLLVAGQADPVTTVADARAMQAGIAGAELAEL CCCCCHHHHHHHHHHHHHHHHHHHCCHHHEEEECCCCCCHHHHHHHHHHHCCCHHHHHHC PASHLSNLEAPQAFDAALAEFLQRD CHHHHCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8125318; 670169 [H]