Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612580
Identifier: 120612580
GI number: 120612580
Start: 4367455
End: 4367751
Strand: Reverse
Name: 120612580
Synonym: Aave_3941
Alternate gene names: NA
Gene position: 4367751-4367455 (Counterclockwise)
Preceding gene: 120612581
Following gene: 120612579
Centisome position: 81.6
GC content: 68.35
Gene sequence:
>297_bases ATGCCTTTCATCATCGAGACCTTCGACAAGCCCGGCCACCAGCACGTGCGCCAGGCCACGCGCGCCGCGCACCTGGAGTT CCTGGACCGCCACAAGGCCTTGCTGCTGGCCTGCGGCGCCAAGCTGGACGACGACGGCCGTGACCTGGGCGGCGGCCTCT ATGTGGTGGCGCTGGATTCGCGCGAGGAAGCCCAGCGCTTCATCGAATCCGACCCTTTCCATGCCGCCGGCCTGTTCGAG CGCGTGGTGCTCACGCGCTGGCGCAAGGCGTACGTCGACGGGCAGTGCCACCTGTGA
Upstream 100 bases:
>100_bases CCGGGGCCGGAGCCCCGGACGCCGCCCGATCCGCATCCACAGCCGCCGGGCCACCGGCGGTCGCCATGTGCCGGCCCGCC GCGCACGGAAAGAACACGCC
Downstream 100 bases:
>100_bases GCCGGACGCTGCCGTGCGGCACCCCCTATTCCCCTGAAGGATTCCCCATGACGACTTCCACTGCTTCTTCCTCGCGCGAG CGCGTCCTCATCACCGGCGG
Product: YciI-like protein
Products: NA
Alternate protein names: YCII-Related Domain-Containing
Number of amino acids: Translated: 98; Mature: 97
Protein sequence:
>98_residues MPFIIETFDKPGHQHVRQATRAAHLEFLDRHKALLLACGAKLDDDGRDLGGGLYVVALDSREEAQRFIESDPFHAAGLFE RVVLTRWRKAYVDGQCHL
Sequences:
>Translated_98_residues MPFIIETFDKPGHQHVRQATRAAHLEFLDRHKALLLACGAKLDDDGRDLGGGLYVVALDSREEAQRFIESDPFHAAGLFE RVVLTRWRKAYVDGQCHL >Mature_97_residues PFIIETFDKPGHQHVRQATRAAHLEFLDRHKALLLACGAKLDDDGRDLGGGLYVVALDSREEAQRFIESDPFHAAGLFER VVLTRWRKAYVDGQCHL
Specific function: Unknown
COG id: COG2350
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11115; Mature: 10984
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFIIETFDKPGHQHVRQATRAAHLEFLDRHKALLLACGAKLDDDGRDLGGGLYVVALDS CCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECC REEAQRFIESDPFHAAGLFERVVLTRWRKAYVDGQCHL HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure PFIIETFDKPGHQHVRQATRAAHLEFLDRHKALLLACGAKLDDDGRDLGGGLYVVALDS CEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECC REEAQRFIESDPFHAAGLFERVVLTRWRKAYVDGQCHL HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA