Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
---|---|
Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is fabG [H]
Identifier: 120612579
GI number: 120612579
Start: 4366673
End: 4367407
Strand: Reverse
Name: fabG [H]
Synonym: Aave_3940
Alternate gene names: 120612579
Gene position: 4367407-4366673 (Counterclockwise)
Preceding gene: 120612580
Following gene: 120612578
Centisome position: 81.59
GC content: 71.7
Gene sequence:
>735_bases ATGACGACTTCCACTGCTTCTTCCTCGCGCGAGCGCGTCCTCATCACCGGCGGCGGTGCCGGCATCGGTGCGGCCACGGC CGAGCGCTGCCGCGCCGACGGCTACGAGCCGGTCGTCATCGACCGCAGCGTGGACCACGTGCCCGGCGGCATCCAGGCGG ACCTGTCCAACCCCGCGGAAACGGCGCGCGCGCTGCAGCAGGCGCTGGCCGGCGGCCCGATCACGCGCCTGGTCAACAAC GTGGGCATCGTGGTGCCGGCCGAAGCGGCCGAGCAGACACTGGAGCAGTTCGACCTGGCCGTGGCGCTGAACCTGCGCTG CAGCCTGCAGTGCATGCAGGCACTGCTGCCGGGCATGCAGGCGGCGGGCTTCGGGCGCATCGTGAACATGTCCTCGCGCG CCGCGCTGGGCAAGGAGCTGCGTACCGCGTACTCGGCCACCAAGGCCGGCCTGATCGGCATGACGCGTGTCTGGGCGCTG GAGCTGGGCCGCCACGGCATCACGGCCAACGCCATCGGACCGGGCCCCATCCGCACCGAGCTGTTCGACCGCGCGAACCC GCCCGATGCGCCGCGCACGCAGGCCATCATCGATGCGGTGCCCGTGAAGCGCGTGGGCACGCCCGACGACGTGGCGCATG CGGTGTCGTACCTGCTCGACGAGCGCAGCGGCTTCGTCACGGGGCAGGTCTTGTACGTCTGCGGAGGCATGACGGTAGGG GTGGCCGGGGTCTGA
Upstream 100 bases:
>100_bases TGGTGCTCACGCGCTGGCGCAAGGCGTACGTCGACGGGCAGTGCCACCTGTGAGCCGGACGCTGCCGTGCGGCACCCCCT ATTCCCCTGAAGGATTCCCC
Downstream 100 bases:
>100_bases CGGCGGCCGTTCGTCCCCCAGCTCCACCTTCGTTTTCTCAGAAATCCACACAACACCAAAGAGACAACTCCCCATGTCGA AAATCACCGCTTTCTTCACC
Product: short-chain dehydrogenase/reductase SDR
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 244; Mature: 243
Protein sequence:
>244_residues MTTSTASSSRERVLITGGGAGIGAATAERCRADGYEPVVIDRSVDHVPGGIQADLSNPAETARALQQALAGGPITRLVNN VGIVVPAEAAEQTLEQFDLAVALNLRCSLQCMQALLPGMQAAGFGRIVNMSSRAALGKELRTAYSATKAGLIGMTRVWAL ELGRHGITANAIGPGPIRTELFDRANPPDAPRTQAIIDAVPVKRVGTPDDVAHAVSYLLDERSGFVTGQVLYVCGGMTVG VAGV
Sequences:
>Translated_244_residues MTTSTASSSRERVLITGGGAGIGAATAERCRADGYEPVVIDRSVDHVPGGIQADLSNPAETARALQQALAGGPITRLVNN VGIVVPAEAAEQTLEQFDLAVALNLRCSLQCMQALLPGMQAAGFGRIVNMSSRAALGKELRTAYSATKAGLIGMTRVWAL ELGRHGITANAIGPGPIRTELFDRANPPDAPRTQAIIDAVPVKRVGTPDDVAHAVSYLLDERSGFVTGQVLYVCGGMTVG VAGV >Mature_243_residues TTSTASSSRERVLITGGGAGIGAATAERCRADGYEPVVIDRSVDHVPGGIQADLSNPAETARALQQALAGGPITRLVNNV GIVVPAEAAEQTLEQFDLAVALNLRCSLQCMQALLPGMQAAGFGRIVNMSSRAALGKELRTAYSATKAGLIGMTRVWALE LGRHGITANAIGPGPIRTELFDRANPPDAPRTQAIIDAVPVKRVGTPDDVAHAVSYLLDERSGFVTGQVLYVCGGMTVGV AGV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI7705925, Length=237, Percent_Identity=34.1772151898734, Blast_Score=109, Evalue=2e-24, Organism=Homo sapiens, GI15277342, Length=249, Percent_Identity=32.1285140562249, Blast_Score=96, Evalue=4e-20, Organism=Homo sapiens, GI32483357, Length=239, Percent_Identity=28.4518828451883, Blast_Score=85, Evalue=7e-17, Organism=Homo sapiens, GI40254992, Length=242, Percent_Identity=30.5785123966942, Blast_Score=82, Evalue=5e-16, Organism=Homo sapiens, GI66933014, Length=197, Percent_Identity=28.9340101522843, Blast_Score=75, Evalue=5e-14, Organism=Homo sapiens, GI19923817, Length=246, Percent_Identity=24.7967479674797, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI10190704, Length=245, Percent_Identity=28.9795918367347, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI126723750, Length=246, Percent_Identity=26.0162601626016, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI5031737, Length=241, Percent_Identity=26.9709543568465, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI59889578, Length=170, Percent_Identity=34.1176470588235, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI4758504, Length=255, Percent_Identity=29.0196078431373, Blast_Score=65, Evalue=5e-11, Organism=Escherichia coli, GI87082100, Length=246, Percent_Identity=30.4878048780488, Blast_Score=96, Evalue=2e-21, Organism=Escherichia coli, GI1787335, Length=236, Percent_Identity=30.0847457627119, Blast_Score=95, Evalue=4e-21, Organism=Escherichia coli, GI1790717, Length=246, Percent_Identity=29.6747967479675, Blast_Score=91, Evalue=5e-20, Organism=Escherichia coli, GI1789208, Length=181, Percent_Identity=32.0441988950276, Blast_Score=85, Evalue=4e-18, Organism=Escherichia coli, GI87082160, Length=242, Percent_Identity=28.5123966942149, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI1787905, Length=238, Percent_Identity=31.0924369747899, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI1788459, Length=195, Percent_Identity=32.3076923076923, Blast_Score=79, Evalue=2e-16, Organism=Escherichia coli, GI2367175, Length=246, Percent_Identity=29.6747967479675, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1789378, Length=256, Percent_Identity=31.25, Blast_Score=75, Evalue=4e-15, Organism=Escherichia coli, GI2367365, Length=231, Percent_Identity=29.8701298701299, Blast_Score=75, Evalue=4e-15, Organism=Escherichia coli, GI1789057, Length=253, Percent_Identity=26.8774703557312, Blast_Score=75, Evalue=5e-15, Organism=Escherichia coli, GI1786701, Length=192, Percent_Identity=30.7291666666667, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI1786812, Length=244, Percent_Identity=25.8196721311475, Blast_Score=65, Evalue=5e-12, Organism=Caenorhabditis elegans, GI17555706, Length=244, Percent_Identity=33.6065573770492, Blast_Score=100, Evalue=7e-22, Organism=Caenorhabditis elegans, GI25147288, Length=242, Percent_Identity=29.7520661157025, Blast_Score=88, Evalue=3e-18, Organism=Caenorhabditis elegans, GI17560676, Length=242, Percent_Identity=28.099173553719, Blast_Score=87, Evalue=6e-18, Organism=Caenorhabditis elegans, GI115534694, Length=248, Percent_Identity=29.8387096774194, Blast_Score=86, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17561402, Length=246, Percent_Identity=28.8617886178862, Blast_Score=86, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17562910, Length=262, Percent_Identity=29.0076335877863, Blast_Score=78, Evalue=4e-15, Organism=Caenorhabditis elegans, GI17559104, Length=260, Percent_Identity=27.3076923076923, Blast_Score=77, Evalue=7e-15, Organism=Caenorhabditis elegans, GI17538480, Length=257, Percent_Identity=29.9610894941634, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17551412, Length=268, Percent_Identity=27.9850746268657, Blast_Score=75, Evalue=4e-14, Organism=Caenorhabditis elegans, GI71994600, Length=247, Percent_Identity=29.5546558704453, Blast_Score=74, Evalue=5e-14, Organism=Caenorhabditis elegans, GI17562990, Length=263, Percent_Identity=26.615969581749, Blast_Score=71, Evalue=4e-13, Organism=Caenorhabditis elegans, GI17563726, Length=257, Percent_Identity=24.9027237354086, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17562904, Length=262, Percent_Identity=24.8091603053435, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17508895, Length=192, Percent_Identity=26.5625, Blast_Score=68, Evalue=5e-12, Organism=Caenorhabditis elegans, GI17560150, Length=263, Percent_Identity=26.9961977186312, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17538486, Length=257, Percent_Identity=27.2373540856031, Blast_Score=65, Evalue=3e-11, Organism=Caenorhabditis elegans, GI71994604, Length=245, Percent_Identity=27.3469387755102, Blast_Score=64, Evalue=5e-11, Organism=Saccharomyces cerevisiae, GI6322861, Length=233, Percent_Identity=28.3261802575107, Blast_Score=66, Evalue=6e-12, Organism=Drosophila melanogaster, GI24643142, Length=240, Percent_Identity=31.6666666666667, Blast_Score=97, Evalue=1e-20, Organism=Drosophila melanogaster, GI24639444, Length=245, Percent_Identity=31.4285714285714, Blast_Score=95, Evalue=4e-20, Organism=Drosophila melanogaster, GI21355319, Length=247, Percent_Identity=29.9595141700405, Blast_Score=93, Evalue=2e-19, Organism=Drosophila melanogaster, GI23397609, Length=244, Percent_Identity=31.1475409836066, Blast_Score=91, Evalue=1e-18, Organism=Drosophila melanogaster, GI28571526, Length=253, Percent_Identity=31.2252964426877, Blast_Score=83, Evalue=1e-16, Organism=Drosophila melanogaster, GI24644339, Length=246, Percent_Identity=30.4878048780488, Blast_Score=79, Evalue=2e-15, Organism=Drosophila melanogaster, GI21357041, Length=252, Percent_Identity=30.5555555555556, Blast_Score=78, Evalue=6e-15, Organism=Drosophila melanogaster, GI18859837, Length=182, Percent_Identity=29.6703296703297, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI24644337, Length=202, Percent_Identity=33.6633663366337, Blast_Score=69, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011284 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 25258; Mature: 25127
Theoretical pI: Translated: 6.77; Mature: 6.77
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTSTASSSRERVLITGGGAGIGAATAERCRADGYEPVVIDRSVDHVPGGIQADLSNPAE CCCCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCHHH TARALQQALAGGPITRLVNNVGIVVPAEAAEQTLEQFDLAVALNLRCSLQCMQALLPGMQ HHHHHHHHHCCCHHHHHHHHCCEEEECHHHHHHHHHHHHHHEECCHHHHHHHHHHHCCCC AAGFGRIVNMSSRAALGKELRTAYSATKAGLIGMTRVWALELGRHGITANAIGPGPIRTE CCCCCCEECCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCEECCCCCCCHHHH LFDRANPPDAPRTQAIIDAVPVKRVGTPDDVAHAVSYLLDERSGFVTGQVLYVCGGMTVG HHHCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHEEEECCCEEC VAGV CCCC >Mature Secondary Structure TTSTASSSRERVLITGGGAGIGAATAERCRADGYEPVVIDRSVDHVPGGIQADLSNPAE CCCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCHHH TARALQQALAGGPITRLVNNVGIVVPAEAAEQTLEQFDLAVALNLRCSLQCMQALLPGMQ HHHHHHHHHCCCHHHHHHHHCCEEEECHHHHHHHHHHHHHHEECCHHHHHHHHHHHCCCC AAGFGRIVNMSSRAALGKELRTAYSATKAGLIGMTRVWALELGRHGITANAIGPGPIRTE CCCCCCEECCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCEECCCCCCCHHHH LFDRANPPDAPRTQAIIDAVPVKRVGTPDDVAHAVSYLLDERSGFVTGQVLYVCGGMTVG HHHCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHEEEECCCEEC VAGV CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA