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The map label for this gene is ubiF [C]

Identifier: 120612566

GI number: 120612566

Start: 4352322

End: 4353479

Strand: Reverse

Name: ubiF [C]

Synonym: Aave_3927

Alternate gene names: 120612566

Gene position: 4353479-4352322 (Counterclockwise)

Preceding gene: 120612576

Following gene: 120612565

Centisome position: 81.33

GC content: 68.83

Gene sequence:

>1158_bases
GTGTCCCAATCCCCCCGTATCGCCGTCGTCGGCGCCGGCCTGGGCGGCGCCGCTGCCGCCAAGCTGTTGCTGCAGGAGGG
CTTCGATGTCCGCGTCTATGAGCAGGCGCCCAGCTTTTCGCGCCTGGGGGCCGGCATCCACGTCGGGCCCAACGTGATGA
AGATCCTGCGCCGCATCGGCATCGAGGATGCGCTCAACGCCCAGGGCTCGCACCCCGACTACTGGTACAGCCGCCACTGG
CAGACCGGCGACGTGCTGGCGCAGATCCCGCTGGGCGACTACGCCGTGAAGGAGTACGGCGCCAGCTACCTGACCGTGCA
CCGCGGCGATTTCCACGCGCTGCTGATCGATGCGCTGCCGGGCAGCGTGATGGCCTACGGCAAGTTCCTGACGAAGGTCG
AGGACCGCGGCCACGTGGTGGTCATGCATTTCGCCGACGGCACGACCGAGGAGGCCGACATCGTCATCGGTGCCGACGGC
GTGAACTCCCGCATCCGCGAGGAACTGCTCGGCCCCGAGCTGCCCAAGTACGCGGGCTACCTGGCCCACCGCGCCGTGTT
CCCCACGCCCGAGGTCCAGGCCGGCATGCTGCCTTTCGACGCCTGCGTGAAGTGGTGGAGCGACGACCGCCACATGATGA
CCTACTTCGTCACCGGCAAACAGGACGAGCTCTACTACGTGACCGGCGTGCCCGTCGAGCACTGGGACCTGAACGACCGC
TGGCTGCCGAGCAGCAAGGATGAGATGCGCGAGGCCTTCTCGGGCTGGCACCCCACGGTGCAGGCGCTGATCGACGCCAC
GGTGGAGGTGACCAAGTGGTCGCTGCTGGAGCGCGACCCGCTGCCGCTGTGGAGCCGCGGCCGCCTCGTGCTGCTGGGCG
ACGCCTGCCACCCGATGAAGCCGCACATGGCGCAGGGCGCCGCGATGGCCATCGAGGACGGCGCCATGCTGGCGCGCTGC
CTGAAGGAGGTCGGCGCGCACAACCACGAACTCGCCTTCGCGCTGTACGAGGCCAACCGCGCCGAGCGCGCGAGCAAGGT
GCAGCGCATCTCGCACGACAACACCTGGCTGCGCACGAACGAAGACCCGTCCTGGTGCTTCGGCTACGACGTGTTCAGTA
TCCCCCTGGTGGAACCGAAGGTCGCCGCCGCGGCCTGA

Upstream 100 bases:

>100_bases
ATTTCTTGCATGGCATGGATAGTGCTTTTCACCCTGGAAAGAGCCTGCCGCAGCGGCGGCCGCCCGTCCGACTTCCCACA
TTCCCGCTAGGAGAAAAACC

Downstream 100 bases:

>100_bases
TACTTCCCTGCCGCAGCCGACAACGCATCCCATGGGAAATCCCCTCCAATCCAGCAGCCCGGCCCCCGGCCTCCGGCTGC
GGGTCAACGGCCGCGCCTGC

Product: salicylate 1-monooxygenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 385; Mature: 384

Protein sequence:

>385_residues
MSQSPRIAVVGAGLGGAAAAKLLLQEGFDVRVYEQAPSFSRLGAGIHVGPNVMKILRRIGIEDALNAQGSHPDYWYSRHW
QTGDVLAQIPLGDYAVKEYGASYLTVHRGDFHALLIDALPGSVMAYGKFLTKVEDRGHVVVMHFADGTTEEADIVIGADG
VNSRIREELLGPELPKYAGYLAHRAVFPTPEVQAGMLPFDACVKWWSDDRHMMTYFVTGKQDELYYVTGVPVEHWDLNDR
WLPSSKDEMREAFSGWHPTVQALIDATVEVTKWSLLERDPLPLWSRGRLVLLGDACHPMKPHMAQGAAMAIEDGAMLARC
LKEVGAHNHELAFALYEANRAERASKVQRISHDNTWLRTNEDPSWCFGYDVFSIPLVEPKVAAAA

Sequences:

>Translated_385_residues
MSQSPRIAVVGAGLGGAAAAKLLLQEGFDVRVYEQAPSFSRLGAGIHVGPNVMKILRRIGIEDALNAQGSHPDYWYSRHW
QTGDVLAQIPLGDYAVKEYGASYLTVHRGDFHALLIDALPGSVMAYGKFLTKVEDRGHVVVMHFADGTTEEADIVIGADG
VNSRIREELLGPELPKYAGYLAHRAVFPTPEVQAGMLPFDACVKWWSDDRHMMTYFVTGKQDELYYVTGVPVEHWDLNDR
WLPSSKDEMREAFSGWHPTVQALIDATVEVTKWSLLERDPLPLWSRGRLVLLGDACHPMKPHMAQGAAMAIEDGAMLARC
LKEVGAHNHELAFALYEANRAERASKVQRISHDNTWLRTNEDPSWCFGYDVFSIPLVEPKVAAAA
>Mature_384_residues
SQSPRIAVVGAGLGGAAAAKLLLQEGFDVRVYEQAPSFSRLGAGIHVGPNVMKILRRIGIEDALNAQGSHPDYWYSRHWQ
TGDVLAQIPLGDYAVKEYGASYLTVHRGDFHALLIDALPGSVMAYGKFLTKVEDRGHVVVMHFADGTTEEADIVIGADGV
NSRIREELLGPELPKYAGYLAHRAVFPTPEVQAGMLPFDACVKWWSDDRHMMTYFVTGKQDELYYVTGVPVEHWDLNDRW
LPSSKDEMREAFSGWHPTVQALIDATVEVTKWSLLERDPLPLWSRGRLVLLGDACHPMKPHMAQGAAMAIEDGAMLARCL
KEVGAHNHELAFALYEANRAERASKVQRISHDNTWLRTNEDPSWCFGYDVFSIPLVEPKVAAAA

Specific function: Catalyzes the oxidative decarboxylation of 6- hydroxynicotinic acid to 2,5-dihydroxypyridine. Uses NADH in preference to NADPH as an electron donor [H]

COG id: COG0654

COG function: function code HC; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002938
- InterPro:   IPR003042 [H]

Pfam domain/function: PF01494 FAD_binding_3 [H]

EC number: =1.14.13.114 [H]

Molecular weight: Translated: 42720; Mature: 42589

Theoretical pI: Translated: 5.95; Mature: 5.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQSPRIAVVGAGLGGAAAAKLLLQEGFDVRVYEQAPSFSRLGAGIHVGPNVMKILRRIG
CCCCCCEEEEECCCCHHHHHHHHHHCCCCEEEEECCCCHHHHCCCCEECHHHHHHHHHCC
IEDALNAQGSHPDYWYSRHWQTGDVLAQIPLGDYAVKEYGASYLTVHRGDFHALLIDALP
CHHHHCCCCCCCCCHHHCCCCCCCEEEECCCCCHHHHHHCCCEEEEECCCEEEEEEECCC
GSVMAYGKFLTKVEDRGHVVVMHFADGTTEEADIVIGADGVNSRIREELLGPELPKYAGY
CHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEECCCCCHHHHHHHCCCCCHHHHHH
LAHRAVFPTPEVQAGMLPFDACVKWWSDDRHMMTYFVTGKQDELYYVTGVPVEHWDLNDR
HHHCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEEEECCCCCEEEEECCCEEECCCCCC
WLPSSKDEMREAFSGWHPTVQALIDATVEVTKWSLLERDPLPLWSRGRLVLLGDACHPMK
CCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCC
PHMAQGAAMAIEDGAMLARCLKEVGAHNHELAFALYEANRAERASKVQRISHDNTWLRTN
CCHHCCCEEEECCHHHHHHHHHHHCCCCCEEEEEEEECCHHHHHHHHHHHCCCCCEEEEC
EDPSWCFGYDVFSIPLVEPKVAAAA
CCCCEEECCCEEEECCCCCCHHCCC
>Mature Secondary Structure 
SQSPRIAVVGAGLGGAAAAKLLLQEGFDVRVYEQAPSFSRLGAGIHVGPNVMKILRRIG
CCCCCEEEEECCCCHHHHHHHHHHCCCCEEEEECCCCHHHHCCCCEECHHHHHHHHHCC
IEDALNAQGSHPDYWYSRHWQTGDVLAQIPLGDYAVKEYGASYLTVHRGDFHALLIDALP
CHHHHCCCCCCCCCHHHCCCCCCCEEEECCCCCHHHHHHCCCEEEEECCCEEEEEEECCC
GSVMAYGKFLTKVEDRGHVVVMHFADGTTEEADIVIGADGVNSRIREELLGPELPKYAGY
CHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEECCCCCHHHHHHHCCCCCHHHHHH
LAHRAVFPTPEVQAGMLPFDACVKWWSDDRHMMTYFVTGKQDELYYVTGVPVEHWDLNDR
HHHCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEEEECCCCCEEEEECCCEEECCCCCC
WLPSSKDEMREAFSGWHPTVQALIDATVEVTKWSLLERDPLPLWSRGRLVLLGDACHPMK
CCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCC
PHMAQGAAMAIEDGAMLARCLKEVGAHNHELAFALYEANRAERASKVQRISHDNTWLRTN
CCHHCCCEEEECCHHHHHHHHHHHCCCCCEEEEEEEECCHHHHHHHHHHHCCCCCEEEEC
EDPSWCFGYDVFSIPLVEPKVAAAA
CCCCEEECCCEEEECCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA