Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
---|---|
Accession | NC_008752 |
Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is iorA [H]
Identifier: 120612565
GI number: 120612565
Start: 4351748
End: 4352290
Strand: Reverse
Name: iorA [H]
Synonym: Aave_3926
Alternate gene names: 120612565
Gene position: 4352290-4351748 (Counterclockwise)
Preceding gene: 120612566
Following gene: 120612564
Centisome position: 81.31
GC content: 71.64
Gene sequence:
>543_bases ATGGGAAATCCCCTCCAATCCAGCAGCCCGGCCCCCGGCCTCCGGCTGCGGGTCAACGGCCGCGCCTGCGACGTGCCCGC CGCACCCGGCACGGCACTGCTGCACGTGCTGCGCAATGACCTGGAGCTGAATGGCCCGAAGTACGGCTGCGGGCTGGGCG AGTGCGGTGCCTGCACGGTGCTGATCGACGGCGTGGCCGCGCGCTCCTGCGTGATCCCCGTGCAGGCCGCCGTGGGCCGC GAGGTGACCACGCTCGAAGGGCTCGGCTCGCGCGCATGCCCTGGCCCCACCCAGCAGGCCTTCATCGACTGCCAGGCGGC CCAGTGCGGCTATTGCCTGAACGGCATGGTCATGACCGTCGAGGCCCTGCTGCGCCGCAATCCGCACCCGTCGGAGCAGG AGGTTCGCAACGAACTGCACCACAACCTCTGCCGCTGCGGCACGCATGTGGAAATCCTGCAGGCCGCGCTGCGCGCCGCG CAACTGCGTGCGGGCGGCGCGGGCGCGGATGGCTTGCCGACCGAAGCGGAAGTGCGCCCATGA
Upstream 100 bases:
>100_bases TCCTGGTGCTTCGGCTACGACGTGTTCAGTATCCCCCTGGTGGAACCGAAGGTCGCCGCCGCGGCCTGATACTTCCCTGC CGCAGCCGACAACGCATCCC
Downstream 100 bases:
>100_bases ACCTGCCGGACCGTTCCATCACGCCTCTTGCGACCGAGGTTCCCGGCGCGCCCGCGGATCTGCTGCACGGGCTGGCCGTG CGGCCCGGCCGCATGGGCTG
Product: 2Fe-2S iron-sulfur cluster-binding domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MGNPLQSSSPAPGLRLRVNGRACDVPAAPGTALLHVLRNDLELNGPKYGCGLGECGACTVLIDGVAARSCVIPVQAAVGR EVTTLEGLGSRACPGPTQQAFIDCQAAQCGYCLNGMVMTVEALLRRNPHPSEQEVRNELHHNLCRCGTHVEILQAALRAA QLRAGGAGADGLPTEAEVRP
Sequences:
>Translated_180_residues MGNPLQSSSPAPGLRLRVNGRACDVPAAPGTALLHVLRNDLELNGPKYGCGLGECGACTVLIDGVAARSCVIPVQAAVGR EVTTLEGLGSRACPGPTQQAFIDCQAAQCGYCLNGMVMTVEALLRRNPHPSEQEVRNELHHNLCRCGTHVEILQAALRAA QLRAGGAGADGLPTEAEVRP >Mature_179_residues GNPLQSSSPAPGLRLRVNGRACDVPAAPGTALLHVLRNDLELNGPKYGCGLGECGACTVLIDGVAARSCVIPVQAAVGRE VTTLEGLGSRACPGPTQQAFIDCQAAQCGYCLNGMVMTVEALLRRNPHPSEQEVRNELHHNLCRCGTHVEILQAALRAAQ LRAGGAGADGLPTEAEVRP
Specific function: Specific towards N-containing N-heterocyclic substrates, including isoquinoline, isoquinolin-5-ol, phthalazine and quinazoline [H]
COG id: COG2080
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]
Homologues:
Organism=Homo sapiens, GI91823271, Length=150, Percent_Identity=39.3333333333333, Blast_Score=80, Evalue=1e-15, Organism=Homo sapiens, GI71773480, Length=90, Percent_Identity=40, Blast_Score=76, Evalue=1e-14, Organism=Escherichia coli, GI1786480, Length=172, Percent_Identity=37.2093023255814, Blast_Score=104, Evalue=3e-24, Organism=Escherichia coli, GI1789232, Length=148, Percent_Identity=39.1891891891892, Blast_Score=92, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17540638, Length=160, Percent_Identity=40, Blast_Score=112, Evalue=1e-25, Organism=Caenorhabditis elegans, GI17539860, Length=157, Percent_Identity=36.3057324840764, Blast_Score=99, Evalue=1e-21, Organism=Caenorhabditis elegans, GI32566215, Length=172, Percent_Identity=33.1395348837209, Blast_Score=95, Evalue=2e-20, Organism=Drosophila melanogaster, GI17737937, Length=167, Percent_Identity=36.5269461077844, Blast_Score=89, Evalue=2e-18, Organism=Drosophila melanogaster, GI24647193, Length=156, Percent_Identity=33.3333333333333, Blast_Score=69, Evalue=1e-12, Organism=Drosophila melanogaster, GI24647199, Length=133, Percent_Identity=33.0827067669173, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI24647197, Length=158, Percent_Identity=33.5443037974684, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI24647195, Length=158, Percent_Identity=33.5443037974684, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI24647201, Length=138, Percent_Identity=31.1594202898551, Blast_Score=64, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002888 - InterPro: IPR006058 - InterPro: IPR012675 - InterPro: IPR001041 [H]
Pfam domain/function: PF00111 Fer2; PF01799 Fer2_2 [H]
EC number: =1.3.99.16 [H]
Molecular weight: Translated: 18726; Mature: 18594
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 6.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNPLQSSSPAPGLRLRVNGRACDVPAAPGTALLHVLRNDLELNGPKYGCGLGECGACTV CCCCCCCCCCCCCEEEEECCEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEE LIDGVAARSCVIPVQAAVGREVTTLEGLGSRACPGPTQQAFIDCQAAQCGYCLNGMVMTV EECCHHHHHHEEEHHHHHCCCHHHHHCCCCCCCCCCCHHHEEECCCCCCCHHHHHHHHHH EALLRRNPHPSEQEVRNELHHNLCRCGTHVEILQAALRAAQLRAGGAGADGLPTEAEVRP HHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure GNPLQSSSPAPGLRLRVNGRACDVPAAPGTALLHVLRNDLELNGPKYGCGLGECGACTV CCCCCCCCCCCCEEEEECCEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEE LIDGVAARSCVIPVQAAVGREVTTLEGLGSRACPGPTQQAFIDCQAAQCGYCLNGMVMTV EECCHHHHHHEEEHHHHHCCCHHHHHCCCCCCCCCCCHHHEEECCCCCCCHHHHHHHHHH EALLRRNPHPSEQEVRNELHHNLCRCGTHVEILQAALRAAQLRAGGAGADGLPTEAEVRP HHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7782304; 8157655 [H]