Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

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The map label for this gene is hosA [H]

Identifier: 120612561

GI number: 120612561

Start: 4345231

End: 4345689

Strand: Reverse

Name: hosA [H]

Synonym: Aave_3922

Alternate gene names: 120612561

Gene position: 4345689-4345231 (Counterclockwise)

Preceding gene: 120612562

Following gene: 120612554

Centisome position: 81.19

GC content: 65.14

Gene sequence:

>459_bases
ATGCCAGACAAGACCGCGACCGAGGATGAGGAATATGTGTTCTCCGAACAGGTGGGGCACCTGCTGCGCCGCGTCTATCA
GCGGCACACGGCGCTGTTCCAGCAGTACATCCCGGACTCCCAGCTGACGGCCGCCCAGTTCGTGGTGCTGTGCTCCCTCC
ATGACCAGGGCAGCAGTTCCCTGGCCGAGGTGGTGAAGGCCACCGTCATCGACCAGGCCACGATCCGCGGCGTGGTGGAC
CGGCTGAAGCAGCGCGGCCTGATCAGCGTGGACCACGACCGCGTGGACCGGCGCAAGGTGGTGATCGAACTCACCGACGA
GGGCCGCGACCTCGTGCGCACCATGCAGCCGTTCGCGCGCAGGATCACCCAGAGCACCTATGGCAAGCTCAATCCCGCGG
AACGGCTGGCGCTGGATTTCCTGCTGCGCAAGATGCTGGAAAGCAGCGAGGACGAATAG

Upstream 100 bases:

>100_bases
CCCTGGCGGACCAGAGCCGCAGGCTCGACCACTCCGTCTCGCTGTTCAGGACCGGTGCCGCCCATTAAGGCTTGCAGCGC
GCGCTACCTACAATTCGCGC

Downstream 100 bases:

>100_bases
TCCGGATCACCCCATCCGCCGCAGTGCGTTGTCGCGGCGCACCAAGGCGTGCCAGAGCGCGGCGGCGATGTGCAGGCCGA
TCACCCAGTAGAAGGCGGTG

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 151

Protein sequence:

>152_residues
MPDKTATEDEEYVFSEQVGHLLRRVYQRHTALFQQYIPDSQLTAAQFVVLCSLHDQGSSSLAEVVKATVIDQATIRGVVD
RLKQRGLISVDHDRVDRRKVVIELTDEGRDLVRTMQPFARRITQSTYGKLNPAERLALDFLLRKMLESSEDE

Sequences:

>Translated_152_residues
MPDKTATEDEEYVFSEQVGHLLRRVYQRHTALFQQYIPDSQLTAAQFVVLCSLHDQGSSSLAEVVKATVIDQATIRGVVD
RLKQRGLISVDHDRVDRRKVVIELTDEGRDLVRTMQPFARRITQSTYGKLNPAERLALDFLLRKMLESSEDE
>Mature_151_residues
PDKTATEDEEYVFSEQVGHLLRRVYQRHTALFQQYIPDSQLTAAQFVVLCSLHDQGSSSLAEVVKATVIDQATIRGVVDR
LKQRGLISVDHDRVDRRKVVIELTDEGRDLVRTMQPFARRITQSTYGKLNPAERLALDFLLRKMLESSEDE

Specific function: Involved in the temperature-dependent positive control of flagellum-driven swimming motility and cellular aggregation. Regulates fliC expression by directly interacting with fliC promoter [H]

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR023187
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 17417; Mature: 17286

Theoretical pI: Translated: 6.12; Mature: 6.12

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDKTATEDEEYVFSEQVGHLLRRVYQRHTALFQQYIPDSQLTAAQFVVLCSLHDQGSSS
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHH
LAEVVKATVIDQATIRGVVDRLKQRGLISVDHDRVDRRKVVIELTDEGRDLVRTMQPFAR
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHEEEEECCCCHHHHHHHHHHHH
RITQSTYGKLNPAERLALDFLLRKMLESSEDE
HHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
PDKTATEDEEYVFSEQVGHLLRRVYQRHTALFQQYIPDSQLTAAQFVVLCSLHDQGSSS
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHH
LAEVVKATVIDQATIRGVVDRLKQRGLISVDHDRVDRRKVVIELTDEGRDLVRTMQPFAR
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHEEEEECCCCHHHHHHHHHHHH
RITQSTYGKLNPAERLALDFLLRKMLESSEDE
HHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10986240 [H]