Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is fhuA [H]
Identifier: 120612556
GI number: 120612556
Start: 4340069
End: 4342261
Strand: Direct
Name: fhuA [H]
Synonym: Aave_3917
Alternate gene names: 120612556
Gene position: 4340069-4342261 (Clockwise)
Preceding gene: 120612555
Following gene: 120612557
Centisome position: 81.08
GC content: 69.72
Gene sequence:
>2193_bases ATGATCCACCTCCGTCCCGGCGCAGCGTTTCAGCGCGCCGCCGCCCTGGCTTTGCCGCGCCGTCCTGCCCGCTCCACCCT CCCTGCGCTCCGCTTGGGCCGCCACGCCCTGACCCCGCTGGCGCTCTGCCTGTCGCAGGCCGCGTTCGCCCAGTCCGGCA CCGCTGTGGACGGCACCGCGCAGTCTCCCGCGCAATTGCAGGAAGTGCGCATCAACGCCGGCACCGAGAAGGACGTGGGC TTCGCTCCGACCGAAGCCCAGACGGCCGGCAAGATGCCGATGCGCCGGCTGGAGACGCCGCAGTCGGTCGGCGTGGTGAC GCGCGAGCAGATGGAGTCGCGCCAGATCACCAACCTGCAGCAGGCGCTGCAGACCGTGGCGGGCGTGAGCCCCGTGAACT TCGGCCGCCGCGGCGTGGACGACCTCAACATCCGCGGCTTCCGCTCCACCGAATCCGTGCTGATCGACGGGCTGGTGCAG AGCGTCGGCATGTGGACACGCCTGAACCCCTACGGCTACGAGCGTTTCGAGGTGCTCAAGGGTGCGGCATCGGTGCTCTA CGGCCAGGTGCAGCCCGGCGGCATCGTCAACGCGGTGAGCAAGCGGCCCAGGCGCGAGGCGCTCACCGAGGTGGGCGTGG AGGTGGGCAGCTTCGGACAGCGCACGCTGCAGGCAGACCTGAACCGGCCGCTGAACGAATCCGGCAAGGCGGCCTTCCGC ATCAACGCGCAGGTGGCCAACAGCGACGACCCGACCGATTTCATCTACCGCCGCGACCGCTGGATCGCGCCCTCGCTGTC GCTGGACTTAGGGCCGCAGACCGACCTGGTGGTGTTCGCCACCTACAACCAGAGCCAGTGGATGCGCCAGCAGGGCGTCA CGCCCTACGGCACGGTGCTGCCCAACCGCAACGGCCCGGTGCGGCGCACGCTCTACACGGGCGACCCCAGCTTCGGCGGA TACGACATCGAGACCAAGTCGCTGGGCTACGCGCTGGAGCACCGCTTCTCGCCCGCGCTCACGCTGCGCCAGAACGTGCG CTACGAGACCGAGGGCGGCACCGGCAACCTCGTCGCCAACTCCACGCTGCAGTCGAACCAGCGCCTGCAGAACCGCACCG CCACGCGCCAGTACATGGACGACGAGATGCTGGCCACCGACACCTCGGTGCTGGCGAAGTTCGCGGCCCTCGGCGTGCAG CACCAGCTGGTGGCCGGGCTGGACGCGCGCACCGGCAAGAGCTGGCTGGGCCGCCGCACCTGCAGCATCGCGCCGATGGA CCTGTTCAACCCGGTGTACGGCGTGGCGGCGCGCTGCCCCGCGGGGCTGACGATCGACGCGCCGGAGCGGCTCACCGTGG CGGGTCTCTACGCGCAGGACCAGATCAGGCTCACGCCGCAGTGGACCGTCCTGGCGGGCCTGCGCCGCGACTGGTCCACC AACACCATCGATGACCGCATCGCGCGGGAGAAGACACGGCAGAAGGACTCCGCCACCACGCTGTCCGCCGGCGTGGTGTA CGAGTTCGTGCCCGGCTGGGCCGCCTACGCGAGCTACGGCGAATCGTTCCTGCCCGTGTCGGGCACCAGCTTCTCGGGCG CGCCGTTCGTTCCCGAAACCGGCAAGCAGTGGGAAACCGGCCTGAAGTACGAAGCTCCCGACCGCAGCGTCACCGGTTCG CTGGCCCTGTTCGACCTGAAGCGCAGCAACGTCACCACCGCCGACCCGGTGAACGCCACGTTCCAGGTGCAGACCGGAAC GCAGCGCGCGCGCGGGCTGGAGCTGGAAGTGGGCGCCGAGCTGCAGCGCCACTGGAAGCTCACGGGCGCCTACACCTACA CCGACTCGGAGGTCACGCGCGACAACAATGCCGCCATCGTCGGCAAGCCGCTCAACCTGACGCCGCGCAGCACGTTCGCC CTGTGGGCCACCTACCAGCTGCCGCAGATGCCGCAGCTCACGCTGGGCGCGGGCGCCCGCCACGTGACCCGGCAGGTCGG CTCCTATCCGTTCTCCCTGCCCGCCTACACGGTGGTGGATTTGTCCGTCGGCTACACCGGGCCCAGCTACCGCATCACGG CCGGCGTGAAGAACGTGTTCGACCGGGCCTACTACGACGGCGCGATCAACGCCAACGTCGTCTCGCCCTCGCTGCCGCGC AACTTCAGCGTAGGCCTGACGTACTTCTTCTGA
Upstream 100 bases:
>100_bases TTAAATACGAATTATTCTCAAAAAAATTCATAGCTCCGATGCCACACGGGATTCCGGGATCCTTCCCGCGCCGGTGCGGC ATCTTTTTTTCCGCCGTTCC
Downstream 100 bases:
>100_bases CGCCTGACGCTCCCGCCCTGCGCGGCGCCCTCCCGCCGCACGGCCAGCCGGCACGCCCATGACCAGCCAGCGCACGATGC ACCGCCTGCTCACGCTCCAC
Product: TonB-dependent siderophore receptor
Products: NA
Alternate protein names: Ferric hydroxamate receptor; Ferric hydroxamate uptake [H]
Number of amino acids: Translated: 730; Mature: 730
Protein sequence:
>730_residues MIHLRPGAAFQRAAALALPRRPARSTLPALRLGRHALTPLALCLSQAAFAQSGTAVDGTAQSPAQLQEVRINAGTEKDVG FAPTEAQTAGKMPMRRLETPQSVGVVTREQMESRQITNLQQALQTVAGVSPVNFGRRGVDDLNIRGFRSTESVLIDGLVQ SVGMWTRLNPYGYERFEVLKGAASVLYGQVQPGGIVNAVSKRPRREALTEVGVEVGSFGQRTLQADLNRPLNESGKAAFR INAQVANSDDPTDFIYRRDRWIAPSLSLDLGPQTDLVVFATYNQSQWMRQQGVTPYGTVLPNRNGPVRRTLYTGDPSFGG YDIETKSLGYALEHRFSPALTLRQNVRYETEGGTGNLVANSTLQSNQRLQNRTATRQYMDDEMLATDTSVLAKFAALGVQ HQLVAGLDARTGKSWLGRRTCSIAPMDLFNPVYGVAARCPAGLTIDAPERLTVAGLYAQDQIRLTPQWTVLAGLRRDWST NTIDDRIAREKTRQKDSATTLSAGVVYEFVPGWAAYASYGESFLPVSGTSFSGAPFVPETGKQWETGLKYEAPDRSVTGS LALFDLKRSNVTTADPVNATFQVQTGTQRARGLELEVGAELQRHWKLTGAYTYTDSEVTRDNNAAIVGKPLNLTPRSTFA LWATYQLPQMPQLTLGAGARHVTRQVGSYPFSLPAYTVVDLSVGYTGPSYRITAGVKNVFDRAYYDGAINANVVSPSLPR NFSVGLTYFF
Sequences:
>Translated_730_residues MIHLRPGAAFQRAAALALPRRPARSTLPALRLGRHALTPLALCLSQAAFAQSGTAVDGTAQSPAQLQEVRINAGTEKDVG FAPTEAQTAGKMPMRRLETPQSVGVVTREQMESRQITNLQQALQTVAGVSPVNFGRRGVDDLNIRGFRSTESVLIDGLVQ SVGMWTRLNPYGYERFEVLKGAASVLYGQVQPGGIVNAVSKRPRREALTEVGVEVGSFGQRTLQADLNRPLNESGKAAFR INAQVANSDDPTDFIYRRDRWIAPSLSLDLGPQTDLVVFATYNQSQWMRQQGVTPYGTVLPNRNGPVRRTLYTGDPSFGG YDIETKSLGYALEHRFSPALTLRQNVRYETEGGTGNLVANSTLQSNQRLQNRTATRQYMDDEMLATDTSVLAKFAALGVQ HQLVAGLDARTGKSWLGRRTCSIAPMDLFNPVYGVAARCPAGLTIDAPERLTVAGLYAQDQIRLTPQWTVLAGLRRDWST NTIDDRIAREKTRQKDSATTLSAGVVYEFVPGWAAYASYGESFLPVSGTSFSGAPFVPETGKQWETGLKYEAPDRSVTGS LALFDLKRSNVTTADPVNATFQVQTGTQRARGLELEVGAELQRHWKLTGAYTYTDSEVTRDNNAAIVGKPLNLTPRSTFA LWATYQLPQMPQLTLGAGARHVTRQVGSYPFSLPAYTVVDLSVGYTGPSYRITAGVKNVFDRAYYDGAINANVVSPSLPR NFSVGLTYFF >Mature_730_residues MIHLRPGAAFQRAAALALPRRPARSTLPALRLGRHALTPLALCLSQAAFAQSGTAVDGTAQSPAQLQEVRINAGTEKDVG FAPTEAQTAGKMPMRRLETPQSVGVVTREQMESRQITNLQQALQTVAGVSPVNFGRRGVDDLNIRGFRSTESVLIDGLVQ SVGMWTRLNPYGYERFEVLKGAASVLYGQVQPGGIVNAVSKRPRREALTEVGVEVGSFGQRTLQADLNRPLNESGKAAFR INAQVANSDDPTDFIYRRDRWIAPSLSLDLGPQTDLVVFATYNQSQWMRQQGVTPYGTVLPNRNGPVRRTLYTGDPSFGG YDIETKSLGYALEHRFSPALTLRQNVRYETEGGTGNLVANSTLQSNQRLQNRTATRQYMDDEMLATDTSVLAKFAALGVQ HQLVAGLDARTGKSWLGRRTCSIAPMDLFNPVYGVAARCPAGLTIDAPERLTVAGLYAQDQIRLTPQWTVLAGLRRDWST NTIDDRIAREKTRQKDSATTLSAGVVYEFVPGWAAYASYGESFLPVSGTSFSGAPFVPETGKQWETGLKYEAPDRSVTGS LALFDLKRSNVTTADPVNATFQVQTGTQRARGLELEVGAELQRHWKLTGAYTYTDSEVTRDNNAAIVGKPLNLTPRSTFA LWATYQLPQMPQLTLGAGARHVTRQVGSYPFSLPAYTVVDLSVGYTGPSYRITAGVKNVFDRAYYDGAINANVVSPSLPR NFSVGLTYFF
Specific function: This receptor binds the ferrichrome-iron ligand. It interacts with the tonB protein, which is responsible for energy coupling of the ferrichrome-promoted iron transport system. Acts as a receptor for bacteriophage T5 as well as T1, phi80 and colicin M. Bi
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1786344, Length=740, Percent_Identity=30.4054054054054, Blast_Score=243, Evalue=3e-65, Organism=Escherichia coli, GI1787344, Length=758, Percent_Identity=26.2532981530343, Blast_Score=165, Evalue=9e-42, Organism=Escherichia coli, GI1787024, Length=768, Percent_Identity=23.4375, Blast_Score=132, Evalue=7e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010917 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 79728; Mature: 79728
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIHLRPGAAFQRAAALALPRRPARSTLPALRLGRHALTPLALCLSQAAFAQSGTAVDGTA CEEECCCHHHHHHHHHHCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCC QSPAQLQEVRINAGTEKDVGFAPTEAQTAGKMPMRRLETPQSVGVVTREQMESRQITNLQ CCCHHHHHEEECCCCCCCCCCCCCCCHHCCCCCHHHCCCCHHCCHHHHHHHHHHHHHHHH QALQTVAGVSPVNFGRRGVDDLNIRGFRSTESVLIDGLVQSVGMWTRLNPYGYERFEVLK HHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEECCCCCCHHHHHHH GAASVLYGQVQPGGIVNAVSKRPRREALTEVGVEVGSFGQRTLQADLNRPLNESGKAAFR HHHHHHCCCCCCCCHHHHHHCCHHHHHHHHHCCHHCCCCHHHHHHHCCCCCCCCCCEEEE INAQVANSDDPTDFIYRRDRWIAPSLSLDLGPQTDLVVFATYNQSQWMRQQGVTPYGTVL EEEEECCCCCCHHHHEECCCEECCCCEECCCCCCCEEEEEECCHHHHHHHCCCCCCCCCC PNRNGPVRRTLYTGDPSFGGYDIETKSLGYALEHRFSPALTLRQNVRYETEGGTGNLVAN CCCCCCEEEEEEECCCCCCCEEEEHHHHHHHHHHCCCCHHHHHHCCEEEECCCCCCEEEC STLQSNQRLQNRTATRQYMDDEMLATDTSVLAKFAALGVQHQLVAGLDARTGKSWLGRRT CHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHCHHHHHHHCCCCCCCHHHHCCCC CSIAPMDLFNPVYGVAARCPAGLTIDAPERLTVAGLYAQDQIRLTPQWTVLAGLRRDWST CCCCCHHHHCHHHHHHHHCCCCCEECCCCCEEEEEEEECCEEEECCCHHHHHHHHCCCCC NTIDDRIAREKTRQKDSATTLSAGVVYEFVPGWAAYASYGESFLPVSGTSFSGAPFVPET CCHHHHHHHHHHHCCCCCCEECCCCCEECCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCC GKQWETGLKYEAPDRSVTGSLALFDLKRSNVTTADPVNATFQVQTGTQRARGLELEVGAE CCHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCHHHCCCEEEECHH LQRHWKLTGAYTYTDSEVTRDNNAAIVGKPLNLTPRSTFALWATYQLPQMPQLTLGAGAR HHHCEEEEEEEEECCCCCCCCCCCEEEECCCCCCCCCCEEEEEEECCCCCCCEECCCCHH HVTRQVGSYPFSLPAYTVVDLSVGYTGPSYRITAGVKNVFDRAYYDGAINANVVSPSLPR HHHHHHCCCCCCCCCEEEEEEEECCCCCCEEEEHHHHHHHHHHHCCCCCCCEEECCCCCC NFSVGLTYFF CCCCCEEEEC >Mature Secondary Structure MIHLRPGAAFQRAAALALPRRPARSTLPALRLGRHALTPLALCLSQAAFAQSGTAVDGTA CEEECCCHHHHHHHHHHCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCC QSPAQLQEVRINAGTEKDVGFAPTEAQTAGKMPMRRLETPQSVGVVTREQMESRQITNLQ CCCHHHHHEEECCCCCCCCCCCCCCCHHCCCCCHHHCCCCHHCCHHHHHHHHHHHHHHHH QALQTVAGVSPVNFGRRGVDDLNIRGFRSTESVLIDGLVQSVGMWTRLNPYGYERFEVLK HHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEECCCCCCHHHHHHH GAASVLYGQVQPGGIVNAVSKRPRREALTEVGVEVGSFGQRTLQADLNRPLNESGKAAFR HHHHHHCCCCCCCCHHHHHHCCHHHHHHHHHCCHHCCCCHHHHHHHCCCCCCCCCCEEEE INAQVANSDDPTDFIYRRDRWIAPSLSLDLGPQTDLVVFATYNQSQWMRQQGVTPYGTVL EEEEECCCCCCHHHHEECCCEECCCCEECCCCCCCEEEEEECCHHHHHHHCCCCCCCCCC PNRNGPVRRTLYTGDPSFGGYDIETKSLGYALEHRFSPALTLRQNVRYETEGGTGNLVAN CCCCCCEEEEEEECCCCCCCEEEEHHHHHHHHHHCCCCHHHHHHCCEEEECCCCCCEEEC STLQSNQRLQNRTATRQYMDDEMLATDTSVLAKFAALGVQHQLVAGLDARTGKSWLGRRT CHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHCHHHHHHHCCCCCCCHHHHCCCC CSIAPMDLFNPVYGVAARCPAGLTIDAPERLTVAGLYAQDQIRLTPQWTVLAGLRRDWST CCCCCHHHHCHHHHHHHHCCCCCEECCCCCEEEEEEEECCEEEECCCHHHHHHHHCCCCC NTIDDRIAREKTRQKDSATTLSAGVVYEFVPGWAAYASYGESFLPVSGTSFSGAPFVPET CCHHHHHHHHHHHCCCCCCEECCCCCEECCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCC GKQWETGLKYEAPDRSVTGSLALFDLKRSNVTTADPVNATFQVQTGTQRARGLELEVGAE CCHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCHHHCCCEEEECHH LQRHWKLTGAYTYTDSEVTRDNNAAIVGKPLNLTPRSTFALWATYQLPQMPQLTLGAGAR HHHCEEEEEEEEECCCCCCCCCCCEEEECCCCCCCCCCEEEEEEECCCCCCCEECCCCHH HVTRQVGSYPFSLPAYTVVDLSVGYTGPSYRITAGVKNVFDRAYYDGAINANVVSPSLPR HHHHHHCCCCCCCCCEEEEEEEECCCCCCEEEEHHHHHHHHHHHCCCCCCCEEECCCCCC NFSVGLTYFF CCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3079747; 8202364; 9278503; 2823072; 7515827; 8617231; 9856937; 9865695; 10850805 [H]