Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612551
Identifier: 120612551
GI number: 120612551
Start: 4335481
End: 4335813
Strand: Direct
Name: 120612551
Synonym: Aave_3912
Alternate gene names: NA
Gene position: 4335481-4335813 (Clockwise)
Preceding gene: 120612549
Following gene: 120612555
Centisome position: 81.0
GC content: 70.87
Gene sequence:
>333_bases ATGAACCGCAAGCCTCTTGCCATTGCCGCAGCCCTGCTCGCCCTGAGCGCCTTCTCCGCCCAGGCCGACACCGGCATCCA GGGCGACTGGAACAACTACCCGGCCGTGAACGACACCCCCAGCACGCTGACGCGCGAGGCCGTGATCGCCGATCTGGTGG CCGCCCGCCAGAATGGCACGATGCCGCGCGGCGGCGACTGGAGCGACGTACCCGCTCCGCTGGCCCTGTCCGGCGCTGCC GGCGGCGATACCCAGGTGGTGACCCGCGAACAGGTGCGCGCCGAAGCCATCGCGGCCGCCCGTTCGCACGAGATCGTCAC CGGCGACCATTGA
Upstream 100 bases:
>100_bases ACCGAGGCAGGACAAGACCGGCGCCGCGCCTTCGCGCAGCAAGCCGGCCTTGCCCGGACATTCCCCGACGCACGGACAGA CCGCCTGAAAGGACCACACC
Downstream 100 bases:
>100_bases GCCGCTCCGCGGTGGCCCCGCGTCCTGGCGACGGGACGCGCGAGCACCGCACGCCCCCCGCAGCCCGCCCATGGCTTCCG CCCGGCGGGCTTTTCCATGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 110; Mature: 110
Protein sequence:
>110_residues MNRKPLAIAAALLALSAFSAQADTGIQGDWNNYPAVNDTPSTLTREAVIADLVAARQNGTMPRGGDWSDVPAPLALSGAA GGDTQVVTREQVRAEAIAAARSHEIVTGDH
Sequences:
>Translated_110_residues MNRKPLAIAAALLALSAFSAQADTGIQGDWNNYPAVNDTPSTLTREAVIADLVAARQNGTMPRGGDWSDVPAPLALSGAA GGDTQVVTREQVRAEAIAAARSHEIVTGDH >Mature_110_residues MNRKPLAIAAALLALSAFSAQADTGIQGDWNNYPAVNDTPSTLTREAVIADLVAARQNGTMPRGGDWSDVPAPLALSGAA GGDTQVVTREQVRAEAIAAARSHEIVTGDH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11363; Mature: 11363
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRKPLAIAAALLALSAFSAQADTGIQGDWNNYPAVNDTPSTLTREAVIADLVAARQNGT CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC MPRGGDWSDVPAPLALSGAAGGDTQVVTREQVRAEAIAAARSHEIVTGDH CCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCEEECCC >Mature Secondary Structure MNRKPLAIAAALLALSAFSAQADTGIQGDWNNYPAVNDTPSTLTREAVIADLVAARQNGT CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC MPRGGDWSDVPAPLALSGAAGGDTQVVTREQVRAEAIAAARSHEIVTGDH CCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA