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The map label for this gene is gntX [H]

Identifier: 120612548

GI number: 120612548

Start: 4332983

End: 4333699

Strand: Direct

Name: gntX [H]

Synonym: Aave_3909

Alternate gene names: 120612548

Gene position: 4332983-4333699 (Clockwise)

Preceding gene: 120612536

Following gene: 120612549

Centisome position: 80.95

GC content: 76.85

Gene sequence:

>717_bases
ATGTGGAAGCAGTGGTTCTCGGGGATATCGGACGGGCTCGCCGCCGCCGTCCGGTCCGTGCCCAGCCAGTGCGCGGTCTG
CCATGCCTGGCCGGCGCGCCGCGTGTGCGATGCCTGCGCCGAGCGCTTCGCCCAGCCGCGCCACCGGTGCGCGACCTGCG
CCCTGCCCGTGCCTGCGAGCGTGCGCCAATGCGGGGAATGCCTGCGCGCCCCCCCGCCCCTGTCGGCCTGCGTCGCCGCG
GTGGACTACGGCTACCCCTGGTCGGACGCGCTGGCCGAATTCAAATTCCGCTCCGACCCGGGCTGGGCCGCCAGCCTGGC
CCTGCTGGCGCGCGCGGCGCCCTGGGCGGAGCCACTGCTCGATGCGGCGGACGCGGTGATGCCGGTCCCGCTGGCCCCGG
AGCGGCTGCGCGAGCGCGGCTTCAACCAGTCGGCGCTGCTGGCGGCGGCCCTCTCGCCGCACCGCTGCGACGTGCGCACC
CTGGTGCGCCTGCGCGCCGCGCCGGCGCAGAGCAGCCTGTCGCGCGCCGGGCGGCTGCGCAATCTGGACGGGGTGTTCGC
CGTGGCGCCGGACCGCGCCGCACGGGTGCGGGGCCAAGGCATCGTGCTGGTGGACGACGTGATGACCACCGGCGCGACGC
TGCATGCCGCCGCCCGCGTGCTGCTGCAGGCCGGTGCCGCACGGGTGGACGCGGTGGTGCTGGCGCGCACGGGCTGA

Upstream 100 bases:

>100_bases
GCGCGGCGGCGGCCGGGTCGATGGTGGGGGGAAGCTGGCGGTCGGGGGGCGCGGACATCGGGTGGGGGGCGGGAAGCGGG
TCGGGCAGTATATTGATGCC

Downstream 100 bases:

>100_bases
AGGGCTGGAGCGGCCCGGGCCACCGCGTGCGGCACCGCGCGGCGTCATCGATACACTTTTTTGCAATCTGCTGTGCAGCA
TGCGGAGACGCCCGGGCCGC

Product: ComF family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MWKQWFSGISDGLAAAVRSVPSQCAVCHAWPARRVCDACAERFAQPRHRCATCALPVPASVRQCGECLRAPPPLSACVAA
VDYGYPWSDALAEFKFRSDPGWAASLALLARAAPWAEPLLDAADAVMPVPLAPERLRERGFNQSALLAAALSPHRCDVRT
LVRLRAAPAQSSLSRAGRLRNLDGVFAVAPDRAARVRGQGIVLVDDVMTTGATLHAAARVLLQAGAARVDAVVLARTG

Sequences:

>Translated_238_residues
MWKQWFSGISDGLAAAVRSVPSQCAVCHAWPARRVCDACAERFAQPRHRCATCALPVPASVRQCGECLRAPPPLSACVAA
VDYGYPWSDALAEFKFRSDPGWAASLALLARAAPWAEPLLDAADAVMPVPLAPERLRERGFNQSALLAAALSPHRCDVRT
LVRLRAAPAQSSLSRAGRLRNLDGVFAVAPDRAARVRGQGIVLVDDVMTTGATLHAAARVLLQAGAARVDAVVLARTG
>Mature_238_residues
MWKQWFSGISDGLAAAVRSVPSQCAVCHAWPARRVCDACAERFAQPRHRCATCALPVPASVRQCGECLRAPPPLSACVAA
VDYGYPWSDALAEFKFRSDPGWAASLALLARAAPWAEPLLDAADAVMPVPLAPERLRERGFNQSALLAAALSPHRCDVRT
LVRLRAAPAQSSLSRAGRLRNLDGVFAVAPDRAARVRGQGIVLVDDVMTTGATLHAAARVLLQAGAARVDAVVLARTG

Specific function: Could be involved in gluconate metabolism [H]

COG id: COG1040

COG function: function code R; Predicted amidophosphoribosyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ComF/GntX family [H]

Homologues:

Organism=Escherichia coli, GI87082263, Length=228, Percent_Identity=35.5263157894737, Blast_Score=93, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005222
- InterPro:   IPR000836 [H]

Pfam domain/function: PF00156 Pribosyltran [H]

EC number: NA

Molecular weight: Translated: 25265; Mature: 25265

Theoretical pI: Translated: 9.11; Mature: 9.11

Prosite motif: PS00103 PUR_PYR_PR_TRANSFER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.2 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
4.2 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWKQWFSGISDGLAAAVRSVPSQCAVCHAWPARRVCDACAERFAQPRHRCATCALPVPAS
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHCCCCCCHH
VRQCGECLRAPPPLSACVAAVDYGYPWSDALAEFKFRSDPGWAASLALLARAAPWAEPLL
HHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHH
DAADAVMPVPLAPERLRERGFNQSALLAAALSPHRCDVRTLVRLRAAPAQSSLSRAGRLR
HHHHHCCCCCCCHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHCCC
NLDGVFAVAPDRAARVRGQGIVLVDDVMTTGATLHAAARVLLQAGAARVDAVVLARTG
CCCCEEEECCCHHHHHCCCCEEEEHHHHHCCHHHHHHHHHHHHHCHHHHHEEEEEECC
>Mature Secondary Structure
MWKQWFSGISDGLAAAVRSVPSQCAVCHAWPARRVCDACAERFAQPRHRCATCALPVPAS
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHCCCCCCHH
VRQCGECLRAPPPLSACVAAVDYGYPWSDALAEFKFRSDPGWAASLALLARAAPWAEPLL
HHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHH
DAADAVMPVPLAPERLRERGFNQSALLAAALSPHRCDVRTLVRLRAAPAQSSLSRAGRLR
HHHHHCCCCCCCHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHCCC
NLDGVFAVAPDRAARVRGQGIVLVDDVMTTGATLHAAARVLLQAGAARVDAVVLARTG
CCCCEEEECCCHHHHHCCCCEEEEHHHHHCCHHHHHHHHHHHHHCHHHHHEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]