Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612536
Identifier: 120612536
GI number: 120612536
Start: 4320917
End: 4321816
Strand: Direct
Name: 120612536
Synonym: Aave_3897
Alternate gene names: NA
Gene position: 4320917-4321816 (Clockwise)
Preceding gene: 120612535
Following gene: 120612548
Centisome position: 80.72
GC content: 73.0
Gene sequence:
>900_bases ATGAGGCCCGCGGCCGCCAGGACCGCGCAGCCGGATATTCCCGCCCTCCTTCTCCCGAATGGCCTTTCCATGCCCCTCTC CGAACCGGATCGCAAGACCTGTCATGAATGCTCCAGCCGGCGTCTGTGCCTGATCGGCCGTCAGGGCGAGGCCACGCGGG TCCCCTGGCCGGCGCTGGTGCAGGAGCACCGGTTCCGCAAGGGAGACCTTCTGCAGACCCAGGGGGAAACCGCCGATTCC ATCTCGGTGATCAAGGTGGGTACCGCGCTGCTGCAGCGCGTGGGCCCGGACGAGGTGGCCCGCCCCGTGGCCATGGCGGG CTGCGGGCAGGCCCTGGGCACGGGCGCGGTGCTCGGCACCGCGGAACGCCTGACCTGGGTCGCCGTCCAGGAAGGACGCC TGTGCCGGATTCCGGCTGCTGCACTGGTGCGCTCCGGCGGGCTGGATGCTGAATTCCTGCAGGCGCTGCTGCAGGAGGAG GCGCAGGCGCAGGCGCGGCTGGCGGACTGGTCCGGTCTGCTGCATCTGCGCGGCGTGCCTGCCCAGTTGGCCAGCGCGCT GCTGCAGCTGTCCCAGCTGCAGCGCAGCACCCTGGTGCGGCTGCCCACCCACACGGTGCTGGCATCCCTGCTCGCGACCA CCCGGGAAACCATTGCACGGTCCCTGACGCAACTGGCGCAGCAGGGCGCCGTGGTGCGCCACGACCGCTGGCATTGCGCC ATCGTGCGGGCGCCCCTGGTCGCATTGCTGGCGAATCAGGCAACGCGCGCCGAGAACCTGCCGCCGGCGCCCGCGCGTCG CCCGGCCCCTGCACGCGATGGCGGCAAGCCCGCGGCATGGCGCGTGGCCCTGGCCGCACCGGCCGCGCGCCCCCCCGCCG TGCAGGCACTGGGGGCGTGA
Upstream 100 bases:
>100_bases CGCTGCTCATGATGTCGCTGTCCGCCGGCGCCCTCGTTCCGGGCCGCCACGGCGACGTGGCCTACGCCTGAGCCTGCCGG CCTCCGGTTCACGGCGGGGC
Downstream 100 bases:
>100_bases CGCTTCCACGCGCCGCACGGGCGCCGCGCCCATGGCCTCGGCCCCGCGCCACGGCACAGGGCGCGAGCCGTCCTCCGCGC TCAGGCGCCAGGCGCCTGCA
Product: cyclic nucleotide-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 299; Mature: 299
Protein sequence:
>299_residues MRPAAARTAQPDIPALLLPNGLSMPLSEPDRKTCHECSSRRLCLIGRQGEATRVPWPALVQEHRFRKGDLLQTQGETADS ISVIKVGTALLQRVGPDEVARPVAMAGCGQALGTGAVLGTAERLTWVAVQEGRLCRIPAAALVRSGGLDAEFLQALLQEE AQAQARLADWSGLLHLRGVPAQLASALLQLSQLQRSTLVRLPTHTVLASLLATTRETIARSLTQLAQQGAVVRHDRWHCA IVRAPLVALLANQATRAENLPPAPARRPAPARDGGKPAAWRVALAAPAARPPAVQALGA
Sequences:
>Translated_299_residues MRPAAARTAQPDIPALLLPNGLSMPLSEPDRKTCHECSSRRLCLIGRQGEATRVPWPALVQEHRFRKGDLLQTQGETADS ISVIKVGTALLQRVGPDEVARPVAMAGCGQALGTGAVLGTAERLTWVAVQEGRLCRIPAAALVRSGGLDAEFLQALLQEE AQAQARLADWSGLLHLRGVPAQLASALLQLSQLQRSTLVRLPTHTVLASLLATTRETIARSLTQLAQQGAVVRHDRWHCA IVRAPLVALLANQATRAENLPPAPARRPAPARDGGKPAAWRVALAAPAARPPAVQALGA >Mature_299_residues MRPAAARTAQPDIPALLLPNGLSMPLSEPDRKTCHECSSRRLCLIGRQGEATRVPWPALVQEHRFRKGDLLQTQGETADS ISVIKVGTALLQRVGPDEVARPVAMAGCGQALGTGAVLGTAERLTWVAVQEGRLCRIPAAALVRSGGLDAEFLQALLQEE AQAQARLADWSGLLHLRGVPAQLASALLQLSQLQRSTLVRLPTHTVLASLLATTRETIARSLTQLAQQGAVVRHDRWHCA IVRAPLVALLANQATRAENLPPAPARRPAPARDGGKPAAWRVALAAPAARPPAVQALGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31715; Mature: 31715
Theoretical pI: Translated: 11.33; Mature: 11.33
Prosite motif: PS50042 CNMP_BINDING_3 ; PS51063 HTH_CRP_2 ; PS00445 FGGY_KINASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPAAARTAQPDIPALLLPNGLSMPLSEPDRKTCHECSSRRLCLIGRQGEATRVPWPALV CCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCCCCCCHHHH QEHRFRKGDLLQTQGETADSISVIKVGTALLQRVGPDEVARPVAMAGCGQALGTGAVLGT HHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHCCCHHHHH AERLTWVAVQEGRLCRIPAAALVRSGGLDAEFLQALLQEEAQAQARLADWSGLLHLRGVP HHHEEEEEECCCCEEECCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCH AQLASALLQLSQLQRSTLVRLPTHTVLASLLATTRETIARSLTQLAQQGAVVRHDRWHCA HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHH IVRAPLVALLANQATRAENLPPAPARRPAPARDGGKPAAWRVALAAPAARPPAVQALGA HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHEEEEEECCCCCCCCHHHCCC >Mature Secondary Structure MRPAAARTAQPDIPALLLPNGLSMPLSEPDRKTCHECSSRRLCLIGRQGEATRVPWPALV CCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCCCCCCHHHH QEHRFRKGDLLQTQGETADSISVIKVGTALLQRVGPDEVARPVAMAGCGQALGTGAVLGT HHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHCCCHHHHH AERLTWVAVQEGRLCRIPAAALVRSGGLDAEFLQALLQEEAQAQARLADWSGLLHLRGVP HHHEEEEEECCCCEEECCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCH AQLASALLQLSQLQRSTLVRLPTHTVLASLLATTRETIARSLTQLAQQGAVVRHDRWHCA HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHH IVRAPLVALLANQATRAENLPPAPARRPAPARDGGKPAAWRVALAAPAARPPAVQALGA HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHEEEEEECCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA