Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612547
Identifier: 120612547
GI number: 120612547
Start: 4332023
End: 4332940
Strand: Reverse
Name: 120612547
Synonym: Aave_3908
Alternate gene names: NA
Gene position: 4332940-4332023 (Counterclockwise)
Preceding gene: 120612550
Following gene: 120612546
Centisome position: 80.95
GC content: 75.71
Gene sequence:
>918_bases ATGTCCGCGCCCCCCGACCGCCAGCTTCCCCCCACCATCGACCCGGCCGCCGCCGCGCGCTGGCATGCGGCCGCGCCCGC TGCCTCCCCGTGGCTGCACGAGGAGGTCGCGCGCCGCATGGAAGACCGGCTGCAGTGGATCCGGCAGGCGCCCGCGGCCT GGGCCGACTGGGACCCGGTGCGCGGCGGCCTGCAGGGGCACGGCCTGGTGGCCCGCCGCTACCCCGGGGCCGTGGCGTGG ATCGCCGAGACCGCCCCGGAGCACCTGCCGGCGGCACGCGAGGCGCTCGTGCGGCCCTGGTGGAGCCCCGGGCGCTGGGC GTCCGGTGCGCCGCGGTTCGGCCTGCCGCCCGACGGCGGAGTGCAGATGCTCTGGGCCAACATGGCGCTGCACCTCGCGG CCGATCCGCAGGCGCTGATCGCCCGCTGGCACCGCGCGCTGGCCGTGGACGGCTACCTGATGTTCTCGTGCCTGGGGCCC GACACCGTGCGCGAGCTGCACGCGCTCCACGCGGCCCTGGGGTGGCCGCCCGCGGGGCACGCCATGACCGACATGCACGA CTGGGGCGACATGCTGGTCCAGCAGGGCTTCGCGGAGCCGGTGATGGACATGGAGCGCATCACCCTGACCTTCGCCACGC CCGCGCGGCTGCTGCAGGAGTTGCGCGAACTCGGCCGCAACTTCCACCCCGCGCGCTTTCCCGCGCTGCGGGGCCGCGCC TGGCGCGACCGGCTCGAGCAGGCGCTGGCCGAACGCCTCGCCAGCCCTGAACACGGCGGCCAGCTCGCGCTCACCTTCGA GATCATCTACGGCCACGCCTTCAAACCGGCGCCGCGGCTCAAGGTGAGCGAAAGCAGCGCGGTCTCGCTGCAGGACATGC GTGCCATGCTGCGCCAGGGGCGCACGCCCGGGCCCTGA
Upstream 100 bases:
>100_bases CGGACCGGACGGCGGCGGCGAGCCCGTCCGATATCCCCGAGAACCACTGCTTCCACATGGCATCAATATACTGCCCGACC CGCTTCCCGCCCCCCACCCG
Downstream 100 bases:
>100_bases AGGCGGGCGCCGCCCCGCGCGGCGGGTTTTCCCGGGCGGATACGGCCCGTGACCCGAATCCACCGCAAGCTACAATTTGC GGGCTATGGGACTGGCCGGC
Product: biotin synthesis protein BioC
Products: NA
Alternate protein names: Biotin Synthesis Protein BioC; Methyltransferase Type; Biotin Synthesis Protein; Methyltransferase; SAM-Dependent Methyltransferase; Biotin Synthesis Protein Bioc; Biotin Synthase BioC; Methyltransferase Domain-Containing Protein; BIOTIN SYNSIS METHYLTRANSFERASE BioC; Methylase Involved In Ubiquinone/Menaquinone Biosynthesis
Number of amino acids: Translated: 305; Mature: 304
Protein sequence:
>305_residues MSAPPDRQLPPTIDPAAAARWHAAAPAASPWLHEEVARRMEDRLQWIRQAPAAWADWDPVRGGLQGHGLVARRYPGAVAW IAETAPEHLPAAREALVRPWWSPGRWASGAPRFGLPPDGGVQMLWANMALHLAADPQALIARWHRALAVDGYLMFSCLGP DTVRELHALHAALGWPPAGHAMTDMHDWGDMLVQQGFAEPVMDMERITLTFATPARLLQELRELGRNFHPARFPALRGRA WRDRLEQALAERLASPEHGGQLALTFEIIYGHAFKPAPRLKVSESSAVSLQDMRAMLRQGRTPGP
Sequences:
>Translated_305_residues MSAPPDRQLPPTIDPAAAARWHAAAPAASPWLHEEVARRMEDRLQWIRQAPAAWADWDPVRGGLQGHGLVARRYPGAVAW IAETAPEHLPAAREALVRPWWSPGRWASGAPRFGLPPDGGVQMLWANMALHLAADPQALIARWHRALAVDGYLMFSCLGP DTVRELHALHAALGWPPAGHAMTDMHDWGDMLVQQGFAEPVMDMERITLTFATPARLLQELRELGRNFHPARFPALRGRA WRDRLEQALAERLASPEHGGQLALTFEIIYGHAFKPAPRLKVSESSAVSLQDMRAMLRQGRTPGP >Mature_304_residues SAPPDRQLPPTIDPAAAARWHAAAPAASPWLHEEVARRMEDRLQWIRQAPAAWADWDPVRGGLQGHGLVARRYPGAVAWI AETAPEHLPAAREALVRPWWSPGRWASGAPRFGLPPDGGVQMLWANMALHLAADPQALIARWHRALAVDGYLMFSCLGPD TVRELHALHAALGWPPAGHAMTDMHDWGDMLVQQGFAEPVMDMERITLTFATPARLLQELRELGRNFHPARFPALRGRAW RDRLEQALAERLASPEHGGQLALTFEIIYGHAFKPAPRLKVSESSAVSLQDMRAMLRQGRTPGP
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33799; Mature: 33668
Theoretical pI: Translated: 8.56; Mature: 8.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAPPDRQLPPTIDPAAAARWHAAAPAASPWLHEEVARRMEDRLQWIRQAPAAWADWDPV CCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH RGGLQGHGLVARRYPGAVAWIAETAPEHLPAAREALVRPWWSPGRWASGAPRFGLPPDGG CCCCCCCCEEEECCCCCEEHHHHHCHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC VQMLWANMALHLAADPQALIARWHRALAVDGYLMFSCLGPDTVRELHALHAALGWPPAGH HHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHEEEECCHHHHHHHHHHHHHHCCCCCCC AMTDMHDWGDMLVQQGFAEPVMDMERITLTFATPARLLQELRELGRNFHPARFPALRGRA CHHHHHHHHHHHHHHHCHHHHHHHHHHEEEECCHHHHHHHHHHHCCCCCCHHCHHHCCHH WRDRLEQALAERLASPEHGGQLALTFEIIYGHAFKPAPRLKVSESSAVSLQDMRAMLRQG HHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCCCCCEECCCCHHHHHHHHHHHHCC RTPGP CCCCC >Mature Secondary Structure SAPPDRQLPPTIDPAAAARWHAAAPAASPWLHEEVARRMEDRLQWIRQAPAAWADWDPV CCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH RGGLQGHGLVARRYPGAVAWIAETAPEHLPAAREALVRPWWSPGRWASGAPRFGLPPDGG CCCCCCCCEEEECCCCCEEHHHHHCHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC VQMLWANMALHLAADPQALIARWHRALAVDGYLMFSCLGPDTVRELHALHAALGWPPAGH HHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHEEEECCHHHHHHHHHHHHHHCCCCCCC AMTDMHDWGDMLVQQGFAEPVMDMERITLTFATPARLLQELRELGRNFHPARFPALRGRA CHHHHHHHHHHHHHHHCHHHHHHHHHHEEEECCHHHHHHHHHHHCCCCCCHHCHHHCCHH WRDRLEQALAERLASPEHGGQLALTFEIIYGHAFKPAPRLKVSESSAVSLQDMRAMLRQG HHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCCCCCEECCCCHHHHHHHHHHHHCC RTPGP CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA