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The map label for this gene is 120612541

Identifier: 120612541

GI number: 120612541

Start: 4325399

End: 4326250

Strand: Reverse

Name: 120612541

Synonym: Aave_3902

Alternate gene names: NA

Gene position: 4326250-4325399 (Counterclockwise)

Preceding gene: 120612542

Following gene: 120612540

Centisome position: 80.82

GC content: 74.18

Gene sequence:

>852_bases
ATGCAGCCCATTATCCGCAAGCGCACCGATGGCGCCAGGGGTTTCCGCCCGGACTGGCGCTTCTGGTGCATCACCGCCGC
CGCGGTCGCCGCCATGGCCGCCACCGCGGCGCTCGGCCGCTGGCAGCTCGCGCGCGCGGCGGAGAAGCAGGCCTGGCAGG
CCATGATCGATGCGCGGCAGGCGATGCCGCCCGTGCCCGCCGCGGCCCTGGCCTCCCTGCCGCCCGTTGCCGGCCCGGAA
AGCGGCAGCCCGGCCATGCCCGCCGCCGAGGCCCTCGTGCACCGCCCGGCGGTGCTCCGGGGCCGCTGGCTGGCGCAGGA
CACGGTCTTCCTCGACAACCGGCAGATGCAGGGCCGCCCCGGATTCTTCGTCGTCACGCCGCTGCGGCTCACCTCGCCGG
GCGCCGAGGGGGCGGTGGTGCTGGTGCAGCGCGGATGGGTGCCGCGCGATTTCCAGGACCGCACACGCCTGCCCGCGGTG
CCCGCGCCTTCGGAGGATGTCGAAGTGCATGGCCGCATCGCGGCGGCGCCCTCGCGGCTCTACGAACCCGGCGGACCGGC
TTCCGCCGCAGGCAGCGAGGGGTCTTCCCGCATCCGGCAGAATCTCGACCTGGCGGCCTACCGCGCCGAGACGGGGCTGC
AGCGCCTCGCCCCCCTCACGGTGATCGAGACGGGTGGGCCGGAAGGTCCGCTGCAGCGCGACTGGCCGGCGGTCGATGCC
GGGGTCGCCAGGCACCATGGCTACGCCTTCCAGTGGTTCGGGCTCTGCGCCCTCGTGGCAATCCTCTATGTCTGGTTCCA
AATCGTCCGACGCTTCATTCGCCCAGGCCGCCAGCCGGCCCCCCCTGCCTGA

Upstream 100 bases:

>100_bases
GCCGCGGCGGGCGTCGTCCCGCCCCGTGCGCATCATGAAGAACAGCGCCGACGCGAGGCTCGCCAGAATGGCCAGGAAGG
CCAGCACCACGACGTATTTC

Downstream 100 bases:

>100_bases
CGGACCGGGTTCCTCCCATCCGCTGGGCCTGAGCGTGCACGGCCTGCCGGCCGCGGCGGATGCCGTGGCGGCGCTGGAAA
CGCGCGCGCGGCAGGGCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: Transmembrane Cytochrome Oxidase; Transmembrane Cytochrome Oxidase Complex Biogenesis Factor; SURF1-Like Protein; Transmembrane Cytochrome Oxidase Complex Protein; Cytochrome C Oxidase Assembly; Surfeit Locus 1 Family Protein; Cytochrome Oxidase Complex Biogenesis Factor; Cytochrome Oxidase Assembly Protein SurF1

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MQPIIRKRTDGARGFRPDWRFWCITAAAVAAMAATAALGRWQLARAAEKQAWQAMIDARQAMPPVPAAALASLPPVAGPE
SGSPAMPAAEALVHRPAVLRGRWLAQDTVFLDNRQMQGRPGFFVVTPLRLTSPGAEGAVVLVQRGWVPRDFQDRTRLPAV
PAPSEDVEVHGRIAAAPSRLYEPGGPASAAGSEGSSRIRQNLDLAAYRAETGLQRLAPLTVIETGGPEGPLQRDWPAVDA
GVARHHGYAFQWFGLCALVAILYVWFQIVRRFIRPGRQPAPPA

Sequences:

>Translated_283_residues
MQPIIRKRTDGARGFRPDWRFWCITAAAVAAMAATAALGRWQLARAAEKQAWQAMIDARQAMPPVPAAALASLPPVAGPE
SGSPAMPAAEALVHRPAVLRGRWLAQDTVFLDNRQMQGRPGFFVVTPLRLTSPGAEGAVVLVQRGWVPRDFQDRTRLPAV
PAPSEDVEVHGRIAAAPSRLYEPGGPASAAGSEGSSRIRQNLDLAAYRAETGLQRLAPLTVIETGGPEGPLQRDWPAVDA
GVARHHGYAFQWFGLCALVAILYVWFQIVRRFIRPGRQPAPPA
>Mature_283_residues
MQPIIRKRTDGARGFRPDWRFWCITAAAVAAMAATAALGRWQLARAAEKQAWQAMIDARQAMPPVPAAALASLPPVAGPE
SGSPAMPAAEALVHRPAVLRGRWLAQDTVFLDNRQMQGRPGFFVVTPLRLTSPGAEGAVVLVQRGWVPRDFQDRTRLPAV
PAPSEDVEVHGRIAAAPSRLYEPGGPASAAGSEGSSRIRQNLDLAAYRAETGLQRLAPLTVIETGGPEGPLQRDWPAVDA
GVARHHGYAFQWFGLCALVAILYVWFQIVRRFIRPGRQPAPPA

Specific function: Unknown

COG id: COG3346

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30591; Mature: 30591

Theoretical pI: Translated: 11.29; Mature: 11.29

Prosite motif: PS50895 SURF1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPIIRKRTDGARGFRPDWRFWCITAAAVAAMAATAALGRWQLARAAEKQAWQAMIDARQ
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMPPVPAAALASLPPVAGPESGSPAMPAAEALVHRPAVLRGRWLAQDTVFLDNRQMQGRP
CCCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCHHHHCCCCCCCEEEECCCCCCCCC
GFFVVTPLRLTSPGAEGAVVLVQRGWVPRDFQDRTRLPAVPAPSEDVEVHGRIAAAPSRL
CEEEEECEEEECCCCCCEEEEEECCCCCCCCHHHCCCCCCCCCCCCCEECCEEEECHHHH
YEPGGPASAAGSEGSSRIRQNLDLAAYRAETGLQRLAPLTVIETGGPEGPLQRDWPAVDA
CCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHH
GVARHHGYAFQWFGLCALVAILYVWFQIVRRFIRPGRQPAPPA
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MQPIIRKRTDGARGFRPDWRFWCITAAAVAAMAATAALGRWQLARAAEKQAWQAMIDARQ
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMPPVPAAALASLPPVAGPESGSPAMPAAEALVHRPAVLRGRWLAQDTVFLDNRQMQGRP
CCCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCHHHHCCCCCCCEEEECCCCCCCCC
GFFVVTPLRLTSPGAEGAVVLVQRGWVPRDFQDRTRLPAVPAPSEDVEVHGRIAAAPSRL
CEEEEECEEEECCCCCCEEEEEECCCCCCCCHHHCCCCCCCCCCCCCEECCEEEECHHHH
YEPGGPASAAGSEGSSRIRQNLDLAAYRAETGLQRLAPLTVIETGGPEGPLQRDWPAVDA
CCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHH
GVARHHGYAFQWFGLCALVAILYVWFQIVRRFIRPGRQPAPPA
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA