Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612540
Identifier: 120612540
GI number: 120612540
Start: 4324699
End: 4325364
Strand: Reverse
Name: 120612540
Synonym: Aave_3901
Alternate gene names: NA
Gene position: 4325364-4324699 (Counterclockwise)
Preceding gene: 120612541
Following gene: 120612539
Centisome position: 80.81
GC content: 74.62
Gene sequence:
>666_bases GTGCACGGCCTGCCGGCCGCGGCGGATGCCGTGGCGGCGCTGGAAACGCGCGCGCGGCAGGGCCGCTGGAAGATGCTGGG CGTGCTGCTGGTCTGCGCCGCCCCCGTCATCGCTTCCTACACCGCCTACTACGTGGTGCGCCCGGAGGCCCGCCGCAGCT ACGGCGAACTCATCGATCCGCAGCGGCCCCTGCCCGATGCCCTGGCCACCCGCGGCATCGACGGCGCGGCGTCCGGCCCG CTCGGGGCGCTGAAGGGGCAGTGGCTGCTGGTCAGCGTGGCATCCGGCGCGTGCGACGACCTGTGCCGCAACCACCTCTA CCTGCAGCGCCAGCTGCGCGAGAGCCTCGGCAAGGACAAGGAACGCATGGACTGGGTCTGGCTCGTGACCGATGCGGCCC CGGCCCCGGCCGAGATCGCCCCCGGCCTGCGCGATGCCGTGGTGCGCCGCGTGGACGCCCAGGCGCTCGCGGGCTGGCTG GCCCCGGCGCCGGGCCATGCGCTGTCCGACCATCTCTTCGTCGTGGACCCGATGGGGCACTGGATGATGCGCTTTCCCGC GCGCATGGACGCTGCGGGCGCCGCCCGGGCCAAGCGCGACCTGGAACGGCTCATGCGGGCCTCGTCATCGTGGGACCAGC CGGGCCGCCCGGAGGCGCAGCCATGA
Upstream 100 bases:
>100_bases TATGTCTGGTTCCAAATCGTCCGACGCTTCATTCGCCCAGGCCGCCAGCCGGCCCCCCCTGCCTGACGGACCGGGTTCCT CCCATCCGCTGGGCCTGAGC
Downstream 100 bases:
>100_bases GCCGGGCCCATCCGCGCGCGTGCGGGGCGATACCCGCCGGAGGTGCCGTGCAATGAACGCCGCCCAGCCGCTCTACGATT TCGCGCCGCTCGCCGAACTG
Product: hypothetical protein
Products: NA
Alternate protein names: Sco1/SenC Family Cytochrome Oxidase Assembly Protein
Number of amino acids: Translated: 221; Mature: 221
Protein sequence:
>221_residues MHGLPAAADAVAALETRARQGRWKMLGVLLVCAAPVIASYTAYYVVRPEARRSYGELIDPQRPLPDALATRGIDGAASGP LGALKGQWLLVSVASGACDDLCRNHLYLQRQLRESLGKDKERMDWVWLVTDAAPAPAEIAPGLRDAVVRRVDAQALAGWL APAPGHALSDHLFVVDPMGHWMMRFPARMDAAGAARAKRDLERLMRASSSWDQPGRPEAQP
Sequences:
>Translated_221_residues MHGLPAAADAVAALETRARQGRWKMLGVLLVCAAPVIASYTAYYVVRPEARRSYGELIDPQRPLPDALATRGIDGAASGP LGALKGQWLLVSVASGACDDLCRNHLYLQRQLRESLGKDKERMDWVWLVTDAAPAPAEIAPGLRDAVVRRVDAQALAGWL APAPGHALSDHLFVVDPMGHWMMRFPARMDAAGAARAKRDLERLMRASSSWDQPGRPEAQP >Mature_221_residues MHGLPAAADAVAALETRARQGRWKMLGVLLVCAAPVIASYTAYYVVRPEARRSYGELIDPQRPLPDALATRGIDGAASGP LGALKGQWLLVSVASGACDDLCRNHLYLQRQLRESLGKDKERMDWVWLVTDAAPAPAEIAPGLRDAVVRRVDAQALAGWL APAPGHALSDHLFVVDPMGHWMMRFPARMDAAGAARAKRDLERLMRASSSWDQPGRPEAQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24004; Mature: 24004
Theoretical pI: Translated: 8.84; Mature: 8.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHGLPAAADAVAALETRARQGRWKMLGVLLVCAAPVIASYTAYYVVRPEARRSYGELIDP CCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHCCC QRPLPDALATRGIDGAASGPLGALKGQWLLVSVASGACDDLCRNHLYLQRQLRESLGKDK CCCCCHHHHHCCCCCCCCCCCCHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCH ERMDWVWLVTDAAPAPAEIAPGLRDAVVRRVDAQALAGWLAPAPGHALSDHLFVVDPMGH HHCCEEEEEECCCCCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCHHH WMMRFPARMDAAGAARAKRDLERLMRASSSWDQPGRPEAQP HHHHHCHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MHGLPAAADAVAALETRARQGRWKMLGVLLVCAAPVIASYTAYYVVRPEARRSYGELIDP CCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHCCC QRPLPDALATRGIDGAASGPLGALKGQWLLVSVASGACDDLCRNHLYLQRQLRESLGKDK CCCCCHHHHHCCCCCCCCCCCCHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCH ERMDWVWLVTDAAPAPAEIAPGLRDAVVRRVDAQALAGWLAPAPGHALSDHLFVVDPMGH HHCCEEEEEECCCCCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCHHH WMMRFPARMDAAGAARAKRDLERLMRASSSWDQPGRPEAQP HHHHHCHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA