Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

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The map label for this gene is 120612540

Identifier: 120612540

GI number: 120612540

Start: 4324699

End: 4325364

Strand: Reverse

Name: 120612540

Synonym: Aave_3901

Alternate gene names: NA

Gene position: 4325364-4324699 (Counterclockwise)

Preceding gene: 120612541

Following gene: 120612539

Centisome position: 80.81

GC content: 74.62

Gene sequence:

>666_bases
GTGCACGGCCTGCCGGCCGCGGCGGATGCCGTGGCGGCGCTGGAAACGCGCGCGCGGCAGGGCCGCTGGAAGATGCTGGG
CGTGCTGCTGGTCTGCGCCGCCCCCGTCATCGCTTCCTACACCGCCTACTACGTGGTGCGCCCGGAGGCCCGCCGCAGCT
ACGGCGAACTCATCGATCCGCAGCGGCCCCTGCCCGATGCCCTGGCCACCCGCGGCATCGACGGCGCGGCGTCCGGCCCG
CTCGGGGCGCTGAAGGGGCAGTGGCTGCTGGTCAGCGTGGCATCCGGCGCGTGCGACGACCTGTGCCGCAACCACCTCTA
CCTGCAGCGCCAGCTGCGCGAGAGCCTCGGCAAGGACAAGGAACGCATGGACTGGGTCTGGCTCGTGACCGATGCGGCCC
CGGCCCCGGCCGAGATCGCCCCCGGCCTGCGCGATGCCGTGGTGCGCCGCGTGGACGCCCAGGCGCTCGCGGGCTGGCTG
GCCCCGGCGCCGGGCCATGCGCTGTCCGACCATCTCTTCGTCGTGGACCCGATGGGGCACTGGATGATGCGCTTTCCCGC
GCGCATGGACGCTGCGGGCGCCGCCCGGGCCAAGCGCGACCTGGAACGGCTCATGCGGGCCTCGTCATCGTGGGACCAGC
CGGGCCGCCCGGAGGCGCAGCCATGA

Upstream 100 bases:

>100_bases
TATGTCTGGTTCCAAATCGTCCGACGCTTCATTCGCCCAGGCCGCCAGCCGGCCCCCCCTGCCTGACGGACCGGGTTCCT
CCCATCCGCTGGGCCTGAGC

Downstream 100 bases:

>100_bases
GCCGGGCCCATCCGCGCGCGTGCGGGGCGATACCCGCCGGAGGTGCCGTGCAATGAACGCCGCCCAGCCGCTCTACGATT
TCGCGCCGCTCGCCGAACTG

Product: hypothetical protein

Products: NA

Alternate protein names: Sco1/SenC Family Cytochrome Oxidase Assembly Protein

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MHGLPAAADAVAALETRARQGRWKMLGVLLVCAAPVIASYTAYYVVRPEARRSYGELIDPQRPLPDALATRGIDGAASGP
LGALKGQWLLVSVASGACDDLCRNHLYLQRQLRESLGKDKERMDWVWLVTDAAPAPAEIAPGLRDAVVRRVDAQALAGWL
APAPGHALSDHLFVVDPMGHWMMRFPARMDAAGAARAKRDLERLMRASSSWDQPGRPEAQP

Sequences:

>Translated_221_residues
MHGLPAAADAVAALETRARQGRWKMLGVLLVCAAPVIASYTAYYVVRPEARRSYGELIDPQRPLPDALATRGIDGAASGP
LGALKGQWLLVSVASGACDDLCRNHLYLQRQLRESLGKDKERMDWVWLVTDAAPAPAEIAPGLRDAVVRRVDAQALAGWL
APAPGHALSDHLFVVDPMGHWMMRFPARMDAAGAARAKRDLERLMRASSSWDQPGRPEAQP
>Mature_221_residues
MHGLPAAADAVAALETRARQGRWKMLGVLLVCAAPVIASYTAYYVVRPEARRSYGELIDPQRPLPDALATRGIDGAASGP
LGALKGQWLLVSVASGACDDLCRNHLYLQRQLRESLGKDKERMDWVWLVTDAAPAPAEIAPGLRDAVVRRVDAQALAGWL
APAPGHALSDHLFVVDPMGHWMMRFPARMDAAGAARAKRDLERLMRASSSWDQPGRPEAQP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24004; Mature: 24004

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHGLPAAADAVAALETRARQGRWKMLGVLLVCAAPVIASYTAYYVVRPEARRSYGELIDP
CCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHCCC
QRPLPDALATRGIDGAASGPLGALKGQWLLVSVASGACDDLCRNHLYLQRQLRESLGKDK
CCCCCHHHHHCCCCCCCCCCCCHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCH
ERMDWVWLVTDAAPAPAEIAPGLRDAVVRRVDAQALAGWLAPAPGHALSDHLFVVDPMGH
HHCCEEEEEECCCCCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCHHH
WMMRFPARMDAAGAARAKRDLERLMRASSSWDQPGRPEAQP
HHHHHCHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MHGLPAAADAVAALETRARQGRWKMLGVLLVCAAPVIASYTAYYVVRPEARRSYGELIDP
CCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHCCC
QRPLPDALATRGIDGAASGPLGALKGQWLLVSVASGACDDLCRNHLYLQRQLRESLGKDK
CCCCCHHHHHCCCCCCCCCCCCHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCH
ERMDWVWLVTDAAPAPAEIAPGLRDAVVRRVDAQALAGWLAPAPGHALSDHLFVVDPMGH
HHCCEEEEEECCCCCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCHHH
WMMRFPARMDAAGAARAKRDLERLMRASSSWDQPGRPEAQP
HHHHHCHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA