Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

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The map label for this gene is cysU [C]

Identifier: 120612529

GI number: 120612529

Start: 4312950

End: 4314605

Strand: Reverse

Name: cysU [C]

Synonym: Aave_3889

Alternate gene names: 120612529

Gene position: 4314605-4312950 (Counterclockwise)

Preceding gene: 120612530

Following gene: 120612528

Centisome position: 80.61

GC content: 68.12

Gene sequence:

>1656_bases
ATGCTGGGCACGCTGCGTCGCGATCCCGCATGGCTGGCGCTCGGCATCGGCGCCATCGCGCTGCTGCTGGTGTTTCTCGG
CTGGCCGCTGGTCGGCATGCTGGCCAAGTCGTTCATCGGTGCGGACGGCCGGGTAGGCCTGGGCGGCTACGTGCGGTTCT
TCGCGGACCGCACCTACCGCGAGGTCTTCGTCAACACGTTGATCCTCGGCGTTGCGGTCACCGCGACCTCCATGCTCGTG
GGGGGATGCCTCGCCCTGGTCGTGGCCCGCTGCAGGTTCCCGCTGGCCGGCCTGGTCACGGCGCTACCGCTCATCACCCT
CGTCATTCCCGACGTGGTGGTGGCGACTGCCTGGCTGCTGATCCTGGGAAAGCAGGGCCTGGTCAATGCGCTGCTGGCCC
CGCTCGGCATCGAACTGCCGATGCTGTACTCCTGGTGGGGCATGGTCTTCGTGATGACGCTGAACAACTACGTGTACGCC
TTCGTCGCGGTGCTCGTGGGTTTGAAGTCGATGGACCGCAACTTGGAGGAGGCGGCCCTGAGCCTCGGCCGGCCGCTCCC
GCACGTGCTGGGCGGCGTGACGCTGCCGCTGCTGCTGCCCTCGGTGTTCGCCGGCGCGCTGATTGTCTTCACCCATGTGA
TCGGCAGCTTCGGCGTGCCCGCCATCCTGGGCGCCCGCACGCCGGTGCTGGCCGTGAAGGCCTACAACGAGTTCGTGAGC
GAGATGGGCGGCAATCCCCAGATGCAGACCACCATGGCGTCGCTGCTGGTGTGCCTGGGCGCGGGGTTGCTGCTGGTGCA
GAAGTTCATCGTCGAGCGGCGGCAGTTCCAGATGGAGGCCGGCCGTACGCCCCCTGCGCTCACCATCCGGGGCGTGCCGG
CGGTGCTGGCCAGCGGCGGCGTGCTGTTCGTGGTGGCGCTCTCGCTGCTGCCGGCGCTGGTGGTGGTGGTCACGGCCTTC
ACGCCCTCCGTGGGGCCGGTGCTGCGCTATGGCGGCTTCACGCTGGCGCATCTGCAGTACGCCCTGGTGCGCGCACCGGA
GCCGCTCTACAACTCGCTGTTCCTGGCATCGGTGGCGACGGCGGCGGGCGTGCTGTTCTCGGTGGTCTCGGCCTACCTCA
TCGTCAAGCGCCGGTCGCCGCTCACGCATGCGCTGGACGTGCTGGTGATGCTGCCGCTGACGATCGCGGGCACGGTGCTG
GGCATCGCCCTCATCAACGCCTTCAACACGGGATGGCTGGTGCTGACGGGCAGCTGGGTGGTCATGGCGCTGGCGTACTT
CCTGCGCCGCGTGCCCACCAGCGTGCGCGCCGCGGTCGGGCCGCTGCACAACCTCAAGGACTCCATCGAGGAGGCTTCCA
TGAGCCTGGGCGTCAGCGCGCTCAAGAGCTTCTTCCGCGTGGTGCTGCCCGTCATCGGCCCGTCCGTGGTCGCCGCGGCC
GTGCTGATGTGGGTGACCACGCTGTCGGAACTCTCGGCCACCGTGGTGCTGTATTTCGGTGGCATGAACACCATGCCCAT
CGAAATCTTCCAGCAGATCGACAGCGGGCGCATGGCCCTGGCATGCGCGTACAGCCTCGTGCTGCTGCTGACGATCTTCG
TGCCGCTCGGGCTGGCGCGCTGGCTCTTCCGGCTCAAGGTCGGAACTCTTGATTGA

Upstream 100 bases:

>100_bases
GTGGACGCGCGCACCGGGGCGCCGGCACGCGCACCGGGGCGCGGCGAGACGGTCGCGCTCCGCGTGCCGCCGCACGCCCA
CATCGTGCAGGGGGCCTGAG

Downstream 100 bases:

>100_bases
ACCCCATGACTGATACCCAACCACACCCTTTCCTCGCCCGGCGCGTCCTGGGCGCCAAGCCTTCGGCCACCAAAGAAATG
ACGCGGCTGGCCAACCAGCT

Product: binding-protein-dependent transport systems inner membrane component

Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 551; Mature: 551

Protein sequence:

>551_residues
MLGTLRRDPAWLALGIGAIALLLVFLGWPLVGMLAKSFIGADGRVGLGGYVRFFADRTYREVFVNTLILGVAVTATSMLV
GGCLALVVARCRFPLAGLVTALPLITLVIPDVVVATAWLLILGKQGLVNALLAPLGIELPMLYSWWGMVFVMTLNNYVYA
FVAVLVGLKSMDRNLEEAALSLGRPLPHVLGGVTLPLLLPSVFAGALIVFTHVIGSFGVPAILGARTPVLAVKAYNEFVS
EMGGNPQMQTTMASLLVCLGAGLLLVQKFIVERRQFQMEAGRTPPALTIRGVPAVLASGGVLFVVALSLLPALVVVVTAF
TPSVGPVLRYGGFTLAHLQYALVRAPEPLYNSLFLASVATAAGVLFSVVSAYLIVKRRSPLTHALDVLVMLPLTIAGTVL
GIALINAFNTGWLVLTGSWVVMALAYFLRRVPTSVRAAVGPLHNLKDSIEEASMSLGVSALKSFFRVVLPVIGPSVVAAA
VLMWVTTLSELSATVVLYFGGMNTMPIEIFQQIDSGRMALACAYSLVLLLTIFVPLGLARWLFRLKVGTLD

Sequences:

>Translated_551_residues
MLGTLRRDPAWLALGIGAIALLLVFLGWPLVGMLAKSFIGADGRVGLGGYVRFFADRTYREVFVNTLILGVAVTATSMLV
GGCLALVVARCRFPLAGLVTALPLITLVIPDVVVATAWLLILGKQGLVNALLAPLGIELPMLYSWWGMVFVMTLNNYVYA
FVAVLVGLKSMDRNLEEAALSLGRPLPHVLGGVTLPLLLPSVFAGALIVFTHVIGSFGVPAILGARTPVLAVKAYNEFVS
EMGGNPQMQTTMASLLVCLGAGLLLVQKFIVERRQFQMEAGRTPPALTIRGVPAVLASGGVLFVVALSLLPALVVVVTAF
TPSVGPVLRYGGFTLAHLQYALVRAPEPLYNSLFLASVATAAGVLFSVVSAYLIVKRRSPLTHALDVLVMLPLTIAGTVL
GIALINAFNTGWLVLTGSWVVMALAYFLRRVPTSVRAAVGPLHNLKDSIEEASMSLGVSALKSFFRVVLPVIGPSVVAAA
VLMWVTTLSELSATVVLYFGGMNTMPIEIFQQIDSGRMALACAYSLVLLLTIFVPLGLARWLFRLKVGTLD
>Mature_551_residues
MLGTLRRDPAWLALGIGAIALLLVFLGWPLVGMLAKSFIGADGRVGLGGYVRFFADRTYREVFVNTLILGVAVTATSMLV
GGCLALVVARCRFPLAGLVTALPLITLVIPDVVVATAWLLILGKQGLVNALLAPLGIELPMLYSWWGMVFVMTLNNYVYA
FVAVLVGLKSMDRNLEEAALSLGRPLPHVLGGVTLPLLLPSVFAGALIVFTHVIGSFGVPAILGARTPVLAVKAYNEFVS
EMGGNPQMQTTMASLLVCLGAGLLLVQKFIVERRQFQMEAGRTPPALTIRGVPAVLASGGVLFVVALSLLPALVVVVTAF
TPSVGPVLRYGGFTLAHLQYALVRAPEPLYNSLFLASVATAAGVLFSVVSAYLIVKRRSPLTHALDVLVMLPLTIAGTVL
GIALINAFNTGWLVLTGSWVVMALAYFLRRVPTSVRAAVGPLHNLKDSIEEASMSLGVSALKSFFRVVLPVIGPSVVAAA
VLMWVTTLSELSATVVLYFGGMNTMPIEIFQQIDSGRMALACAYSLVLLLTIFVPLGLARWLFRLKVGTLD

Specific function: Probably part of the binding-protein-dependent transport system y4fNOP. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1178

COG function: function code P; ABC-type Fe3+ transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transmembrane type-1 domains [H]

Homologues:

Organism=Escherichia coli, GI1788764, Length=156, Percent_Identity=30.1282051282051, Blast_Score=62, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 58549; Mature: 58549

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHCCCCC
>Mature Secondary Structure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HHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]

Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]