Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is aatB [H]
Identifier: 120612528
GI number: 120612528
Start: 4311724
End: 4312944
Strand: Reverse
Name: aatB [H]
Synonym: Aave_3888
Alternate gene names: 120612528
Gene position: 4312944-4311724 (Counterclockwise)
Preceding gene: 120612529
Following gene: 120612527
Centisome position: 80.57
GC content: 68.96
Gene sequence:
>1221_bases ATGACTGATACCCAACCACACCCTTTCCTCGCCCGGCGCGTCCTGGGCGCCAAGCCTTCGGCCACCAAAGAAATGACGCG GCTGGCCAACCAGCTCCGACGCGAGGGCCGCAGCGTCATCGCCCTCAGCCAGGGCGAGCCCGACTTCCCGACGCCGGCGC ACGTGCGCGAGGCGGCCAAACAGGCCATCGACCGCAACGAGTCGCGCTACACGGACGTCGCCGGCACCTTCGCCCTGCGC GAAGCGGTGGTCCGCAAGTTCGAGCGCGACAACGGCCTGAGGTACACGCCCGAGCAGGTCCAGGTCGGATGCGGCGCCAA GCAGATCCTGTACAACGCGCTGCAGGCGACCCTCGACCCGGGCGACGAGGTCGTCGTGCCGACGCCCGCCTGGGTGTCGT ATCCGGAAATGGTGCTGCTGGCAGGCGGGCAGCCCGTCATCGTGCGCTGCGGTGCGCGCAGCGGCTTCAAGATCACGCCG GAGCAGCTGGATGCCGCGATCACGCCGCGCACCAAGTGGGTGATGCTGAATTCGCCGTCCAATCCCAGCGGTGCGGTGTA CTCGCACGAAGAGCTCGCGGCGCTCGGCGAGGTGCTGCTCAGGCACCCGCAGGTCTGGATGATGGCGGACGACATCTACG AGAAGATCCGCTACGACGACACGCCCTTCGCCACGCCTGCCGCCGTGACGCCCGCGCTGGCATCGCGCACGCTGACCATC AACGGCGTATCCAAGGCCTATGCCATGACGGGCTGGCGCGTCGGCTTCGGTGCGGGGCCGCTCGAGCTGATCAAGGCGAT GAACCTCGTGCAGTCCCAGTCGACCTCGCACACCAGTTCGATCAGCCAGGCGGCGTCCGTCGCGGCACTCGACGGCCCGA TGGACTTCCTGCCGGCCTTCGTCGATGCATTCCGGCGGCGCCGCGATGCGGTGGTGGCCCGGCTCAACGCCATGGAGGGC GTGTCGTGCGAACTGCCGCCAGGCGCGTTCTATGCCTTCCCCGGCGTGCAGGGGCTGCTGGGGCGCCGCGACCGGTCGGG CCACCTCATCGCGACCGATGCCGACCTGGCGATGTACCTGCTGCGCGAAGCGGGCGTGGCCATCGTGCCCGGCTCTGCGT TCGAACTGCCGGGCCATCTGCGCTTCTCCTATGCAGCGTCCGACGAGGACCTGTCGGAGGCGTTGAGCCGTGTGGCTGCC GCATGCGCCGAACTGCACTGA
Upstream 100 bases:
>100_bases CATGCGCGTACAGCCTCGTGCTGCTGCTGACGATCTTCGTGCCGCTCGGGCTGGCGCGCTGGCTCTTCCGGCTCAAGGTC GGAACTCTTGATTGAACCCC
Downstream 100 bases:
>100_bases ATTCTTCTTCCAAGGGCCCACCAATGACCAAGAACCAGACCCTCCGCGCGGCGCTGGGCAGCGGCACGCTGTTCACCGCC ATGGCGGCACACAACCCCCT
Product: aminotransferase
Products: NA
Alternate protein names: AspAT; Transaminase A [H]
Number of amino acids: Translated: 406; Mature: 405
Protein sequence:
>406_residues MTDTQPHPFLARRVLGAKPSATKEMTRLANQLRREGRSVIALSQGEPDFPTPAHVREAAKQAIDRNESRYTDVAGTFALR EAVVRKFERDNGLRYTPEQVQVGCGAKQILYNALQATLDPGDEVVVPTPAWVSYPEMVLLAGGQPVIVRCGARSGFKITP EQLDAAITPRTKWVMLNSPSNPSGAVYSHEELAALGEVLLRHPQVWMMADDIYEKIRYDDTPFATPAAVTPALASRTLTI NGVSKAYAMTGWRVGFGAGPLELIKAMNLVQSQSTSHTSSISQAASVAALDGPMDFLPAFVDAFRRRRDAVVARLNAMEG VSCELPPGAFYAFPGVQGLLGRRDRSGHLIATDADLAMYLLREAGVAIVPGSAFELPGHLRFSYAASDEDLSEALSRVAA ACAELH
Sequences:
>Translated_406_residues MTDTQPHPFLARRVLGAKPSATKEMTRLANQLRREGRSVIALSQGEPDFPTPAHVREAAKQAIDRNESRYTDVAGTFALR EAVVRKFERDNGLRYTPEQVQVGCGAKQILYNALQATLDPGDEVVVPTPAWVSYPEMVLLAGGQPVIVRCGARSGFKITP EQLDAAITPRTKWVMLNSPSNPSGAVYSHEELAALGEVLLRHPQVWMMADDIYEKIRYDDTPFATPAAVTPALASRTLTI NGVSKAYAMTGWRVGFGAGPLELIKAMNLVQSQSTSHTSSISQAASVAALDGPMDFLPAFVDAFRRRRDAVVARLNAMEG VSCELPPGAFYAFPGVQGLLGRRDRSGHLIATDADLAMYLLREAGVAIVPGSAFELPGHLRFSYAASDEDLSEALSRVAA ACAELH >Mature_405_residues TDTQPHPFLARRVLGAKPSATKEMTRLANQLRREGRSVIALSQGEPDFPTPAHVREAAKQAIDRNESRYTDVAGTFALRE AVVRKFERDNGLRYTPEQVQVGCGAKQILYNALQATLDPGDEVVVPTPAWVSYPEMVLLAGGQPVIVRCGARSGFKITPE QLDAAITPRTKWVMLNSPSNPSGAVYSHEELAALGEVLLRHPQVWMMADDIYEKIRYDDTPFATPAAVTPALASRTLTIN GVSKAYAMTGWRVGFGAGPLELIKAMNLVQSQSTSHTSSISQAASVAALDGPMDFLPAFVDAFRRRRDAVVARLNAMEGV SCELPPGAFYAFPGVQGLLGRRDRSGHLIATDADLAMYLLREAGVAIVPGSAFELPGHLRFSYAASDEDLSEALSRVAAA CAELH
Specific function: Involved in symbiotic nitrogen fixation [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI95147551, Length=424, Percent_Identity=27.8301886792453, Blast_Score=160, Evalue=2e-39, Organism=Homo sapiens, GI169881279, Length=424, Percent_Identity=27.8301886792453, Blast_Score=160, Evalue=2e-39, Organism=Homo sapiens, GI56713256, Length=417, Percent_Identity=26.6187050359712, Blast_Score=149, Evalue=4e-36, Organism=Homo sapiens, GI56713254, Length=417, Percent_Identity=26.6187050359712, Blast_Score=149, Evalue=4e-36, Organism=Homo sapiens, GI169881281, Length=421, Percent_Identity=24.9406175771971, Blast_Score=126, Evalue=4e-29, Organism=Homo sapiens, GI4507369, Length=396, Percent_Identity=24.4949494949495, Blast_Score=97, Evalue=2e-20, Organism=Escherichia coli, GI1786816, Length=385, Percent_Identity=29.6103896103896, Blast_Score=154, Evalue=7e-39, Organism=Escherichia coli, GI1788627, Length=397, Percent_Identity=28.7153652392947, Blast_Score=154, Evalue=1e-38, Organism=Escherichia coli, GI1788722, Length=405, Percent_Identity=27.1604938271605, Blast_Score=124, Evalue=1e-29, Organism=Caenorhabditis elegans, GI71994472, Length=424, Percent_Identity=27.3584905660377, Blast_Score=124, Evalue=1e-28, Organism=Caenorhabditis elegans, GI71994476, Length=419, Percent_Identity=27.2076372315036, Blast_Score=123, Evalue=1e-28, Organism=Caenorhabditis elegans, GI17567369, Length=360, Percent_Identity=25.8333333333333, Blast_Score=113, Evalue=2e-25, Organism=Caenorhabditis elegans, GI17567663, Length=379, Percent_Identity=24.5382585751979, Blast_Score=108, Evalue=4e-24, Organism=Saccharomyces cerevisiae, GI6322401, Length=401, Percent_Identity=24.9376558603491, Blast_Score=129, Evalue=7e-31, Organism=Drosophila melanogaster, GI28573069, Length=412, Percent_Identity=25.9708737864078, Blast_Score=134, Evalue=1e-31, Organism=Drosophila melanogaster, GI24646114, Length=412, Percent_Identity=25.9708737864078, Blast_Score=134, Evalue=1e-31, Organism=Drosophila melanogaster, GI28573067, Length=412, Percent_Identity=25.9708737864078, Blast_Score=134, Evalue=1e-31, Organism=Drosophila melanogaster, GI28573065, Length=412, Percent_Identity=25.9708737864078, Blast_Score=134, Evalue=1e-31, Organism=Drosophila melanogaster, GI18859735, Length=392, Percent_Identity=24.7448979591837, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI45551451, Length=401, Percent_Identity=24.6882793017456, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI24641770, Length=401, Percent_Identity=24.6882793017456, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI24641760, Length=401, Percent_Identity=24.6882793017456, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI24641768, Length=401, Percent_Identity=24.6882793017456, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI24641766, Length=401, Percent_Identity=24.6882793017456, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI24641764, Length=401, Percent_Identity=24.6882793017456, Blast_Score=74, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001176 - InterPro: IPR004839 - InterPro: IPR004838 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: =2.6.1.1 [H]
Molecular weight: Translated: 43887; Mature: 43756
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: PS00105 AA_TRANSFER_CLASS_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDTQPHPFLARRVLGAKPSATKEMTRLANQLRREGRSVIALSQGEPDFPTPAHVREAAK CCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHH QAIDRNESRYTDVAGTFALREAVVRKFERDNGLRYTPEQVQVGCGAKQILYNALQATLDP HHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEECCCHHHHHHHHHHHHCCC GDEVVVPTPAWVSYPEMVLLAGGQPVIVRCGARSGFKITPEQLDAAITPRTKWVMLNSPS CCCEEECCCCCCCCCCEEEEECCCEEEEEECCCCCCEECHHHHCCEECCCEEEEEEECCC NPSGAVYSHEELAALGEVLLRHPQVWMMADDIYEKIRYDDTPFATPAAVTPALASRTLTI CCCCCEECHHHHHHHHHHHHHCCCCEEEHHHHHHHHCCCCCCCCCCHHHHHHHHCCEEEE NGVSKAYAMTGWRVGFGAGPLELIKAMNLVQSQSTSHTSSISQAASVAALDGPMDFLPAF ECCHHHHHHCCEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHH VDAFRRRRDAVVARLNAMEGVSCELPPGAFYAFPGVQGLLGRRDRSGHLIATDADLAMYL HHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCHHHHHCCCCCCCCEEEECHHHHHHH LREAGVAIVPGSAFELPGHLRFSYAASDEDLSEALSRVAAACAELH HHHCCEEEECCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TDTQPHPFLARRVLGAKPSATKEMTRLANQLRREGRSVIALSQGEPDFPTPAHVREAAK CCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHH QAIDRNESRYTDVAGTFALREAVVRKFERDNGLRYTPEQVQVGCGAKQILYNALQATLDP HHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEECCCHHHHHHHHHHHHCCC GDEVVVPTPAWVSYPEMVLLAGGQPVIVRCGARSGFKITPEQLDAAITPRTKWVMLNSPS CCCEEECCCCCCCCCCEEEEECCCEEEEEECCCCCCEECHHHHCCEECCCEEEEEEECCC NPSGAVYSHEELAALGEVLLRHPQVWMMADDIYEKIRYDDTPFATPAAVTPALASRTLTI CCCCCEECHHHHHHHHHHHHHCCCCEEEHHHHHHHHCCCCCCCCCCHHHHHHHHCCEEEE NGVSKAYAMTGWRVGFGAGPLELIKAMNLVQSQSTSHTSSISQAASVAALDGPMDFLPAF ECCHHHHHHCCEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHH VDAFRRRRDAVVARLNAMEGVSCELPPGAFYAFPGVQGLLGRRDRSGHLIATDADLAMYL HHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCHHHHHCCCCCCCCEEEECHHHHHHH LREAGVAIVPGSAFELPGHLRFSYAASDEDLSEALSRVAAACAELH HHHCCEEEECCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11481430 [H]