Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612526
Identifier: 120612526
GI number: 120612526
Start: 4310120
End: 4310659
Strand: Reverse
Name: 120612526
Synonym: Aave_3886
Alternate gene names: NA
Gene position: 4310659-4310120 (Counterclockwise)
Preceding gene: 120612527
Following gene: 120612525
Centisome position: 80.53
GC content: 61.11
Gene sequence:
>540_bases ATGACCGTTGAAAACACCGGGACCGTTGACGCCGTCGGCACCGACAAGGAGACTGGAGAGGTTCGGTTGAGCATCGTCGA TCACCTGCATTGGGATGCGGAGCACCTCTGTCTGCTGCAGAAGAAAATCAACGGCTACCTTGACTTCATAGTGTCCGGTG GAATCTACGCTTCATACCCAGACGCCAAAGGCCGTCCACTGGTCATCGATGTGTACACGAAGTTCCGCCCAACGGAGGGC GCGGAACGCTCTCTGCTGGACTTGACGAGCACCGGCGGTATGGCGCAACCCTTGCGCGCGTGTGAAAATCGGATGGGGCG TGCTGATCGCGGGCATAGCTATCAGCCTGCTGCTGGCCGGCGGGCTCAAGTCGGCGCGGACCGCGACCATCTTCTTCGCG TGGCCTTTGCGGGTGTGATCACGCTGACGGCCAACGCGTTGTGGCGCGGCCTGCGCAAAGATCACCAAGAAGAGCAGTTC CGCGAGCGAGCGCTAAGCCGGCGCATGAGGGAGTTCGTCGACCAGACGCTCCCCATCTGA
Upstream 100 bases:
>100_bases GCTGGCCTCTGCTGAACCAGGCCGCGCGCCGAGCCTGCAGAACCTAAGGCAGAACCCGGCCGGAATCCGGCCAGAACCCG ACCTTCCCGGTAGTCTCCTG
Downstream 100 bases:
>100_bases ATAGGGACACCGTGACACTTGAACTTCTGGGCGCCTTCGGCAAGAGCTTTCTCTTCGTGATTGCCGCGCTGCTGCCTATC GTGAATCCGGCCGCCACGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 179; Mature: 178
Protein sequence:
>179_residues MTVENTGTVDAVGTDKETGEVRLSIVDHLHWDAEHLCLLQKKINGYLDFIVSGGIYASYPDAKGRPLVIDVYTKFRPTEG AERSLLDLTSTGGMAQPLRACENRMGRADRGHSYQPAAGRRAQVGADRDHLLRVAFAGVITLTANALWRGLRKDHQEEQF RERALSRRMREFVDQTLPI
Sequences:
>Translated_179_residues MTVENTGTVDAVGTDKETGEVRLSIVDHLHWDAEHLCLLQKKINGYLDFIVSGGIYASYPDAKGRPLVIDVYTKFRPTEG AERSLLDLTSTGGMAQPLRACENRMGRADRGHSYQPAAGRRAQVGADRDHLLRVAFAGVITLTANALWRGLRKDHQEEQF RERALSRRMREFVDQTLPI >Mature_178_residues TVENTGTVDAVGTDKETGEVRLSIVDHLHWDAEHLCLLQKKINGYLDFIVSGGIYASYPDAKGRPLVIDVYTKFRPTEGA ERSLLDLTSTGGMAQPLRACENRMGRADRGHSYQPAAGRRAQVGADRDHLLRVAFAGVITLTANALWRGLRKDHQEEQFR ERALSRRMREFVDQTLPI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20048; Mature: 19917
Theoretical pI: Translated: 8.25; Mature: 8.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVENTGTVDAVGTDKETGEVRLSIVDHLHWDAEHLCLLQKKINGYLDFIVSGGIYASYP CCCCCCCCEEECCCCCCCCCEEEHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEEECC DAKGRPLVIDVYTKFRPTEGAERSLLDLTSTGGMAQPLRACENRMGRADRGHSYQPAAGR CCCCCEEEEEEECCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCC RAQVGADRDHLLRVAFAGVITLTANALWRGLRKDHQEEQFRERALSRRMREFVDQTLPI CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TVENTGTVDAVGTDKETGEVRLSIVDHLHWDAEHLCLLQKKINGYLDFIVSGGIYASYP CCCCCCCEEECCCCCCCCCEEEHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEEECC DAKGRPLVIDVYTKFRPTEGAERSLLDLTSTGGMAQPLRACENRMGRADRGHSYQPAAGR CCCCCEEEEEEECCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCC RAQVGADRDHLLRVAFAGVITLTANALWRGLRKDHQEEQFRERALSRRMREFVDQTLPI CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA