Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is marC [H]
Identifier: 120612525
GI number: 120612525
Start: 4309407
End: 4310108
Strand: Reverse
Name: marC [H]
Synonym: Aave_3885
Alternate gene names: 120612525
Gene position: 4310108-4309407 (Counterclockwise)
Preceding gene: 120612526
Following gene: 120612524
Centisome position: 80.52
GC content: 66.67
Gene sequence:
>702_bases GTGACACTTGAACTTCTGGGCGCCTTCGGCAAGAGCTTTCTCTTCGTGATTGCCGCGCTGCTGCCTATCGTGAATCCGGC CGCCACGGCGCCCATCTTCCTGGGCCTGACCGAGGGGGCATCACCGACCACGCGCGCACTGCTGGCGCGCCGCATCGCAC GCAACATGTTCTGGCTGCTGCTGGGCGCCATGCTGGTCGGCTCCTACGTGCTGGAGTTCTTCGGCATCTCGCTGCCCATC GTGCGCGTGGGTGGCGGCATGATCGTGGCAGCGACGGCCTGGCGGTTGCTGACGGCCACGCAGGCCACGGTGGACAGCCG CACCGAACTGGCCGAGAGCTTCACGCCCGACATGGCGCGACGCCAGGCTTTCTACCCGCTCACCTTTCCGGTGAGTTGCG GGCCCGGCTCGATCGCGGCGGCCATCACGGTGGGGGTGTCGCTGGCCGACGCGCGGCTGTCGATGTCGCTGGCGCGGATG GGAGGTGGCGTACTGGCGCTGCTGTCCGTCGCCGTACTGCTGTACTTCGCCTTCCGCTATGCGCAGCAATTGCTCAAGCC GCTCGGCGAAGCCGGCTCGGTGATCTTCCTGCGGTTGTCGGCCTTCATCCTGCTGTGCCTGGGCGTGCAGATCGTGTGGG ACGGCGTGTACGAACTGGGCGTCGCGATGTTGCGCGACGGGATGCTGCCACTGAATTCTTGA
Upstream 100 bases:
>100_bases TGCGCAAAGATCACCAAGAAGAGCAGTTCCGCGAGCGAGCGCTAAGCCGGCGCATGAGGGAGTTCGTCGACCAGACGCTC CCCATCTGAATAGGGACACC
Downstream 100 bases:
>100_bases ACTTCGACTTCAGTTCATGGCCTGCTGCTTCGCTCGCCTAACGGTTGGATCTCCCCGGCTGCCGGGCCGCGGCAAGATCG ATCTTCGCAGCGCAGACATC
Product: multiple antibiotic resistance (MarC)-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 233; Mature: 232
Protein sequence:
>233_residues MTLELLGAFGKSFLFVIAALLPIVNPAATAPIFLGLTEGASPTTRALLARRIARNMFWLLLGAMLVGSYVLEFFGISLPI VRVGGGMIVAATAWRLLTATQATVDSRTELAESFTPDMARRQAFYPLTFPVSCGPGSIAAAITVGVSLADARLSMSLARM GGGVLALLSVAVLLYFAFRYAQQLLKPLGEAGSVIFLRLSAFILLCLGVQIVWDGVYELGVAMLRDGMLPLNS
Sequences:
>Translated_233_residues MTLELLGAFGKSFLFVIAALLPIVNPAATAPIFLGLTEGASPTTRALLARRIARNMFWLLLGAMLVGSYVLEFFGISLPI VRVGGGMIVAATAWRLLTATQATVDSRTELAESFTPDMARRQAFYPLTFPVSCGPGSIAAAITVGVSLADARLSMSLARM GGGVLALLSVAVLLYFAFRYAQQLLKPLGEAGSVIFLRLSAFILLCLGVQIVWDGVYELGVAMLRDGMLPLNS >Mature_232_residues TLELLGAFGKSFLFVIAALLPIVNPAATAPIFLGLTEGASPTTRALLARRIARNMFWLLLGAMLVGSYVLEFFGISLPIV RVGGGMIVAATAWRLLTATQATVDSRTELAESFTPDMARRQAFYPLTFPVSCGPGSIAAAITVGVSLADARLSMSLARMG GGVLALLSVAVLLYFAFRYAQQLLKPLGEAGSVIFLRLSAFILLCLGVQIVWDGVYELGVAMLRDGMLPLNS
Specific function: Unknown
COG id: COG2095
COG function: function code U; Multiple antibiotic transporter
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0056 (marC) family [H]
Homologues:
Organism=Escherichia coli, GI1787809, Length=197, Percent_Identity=29.9492385786802, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI1787494, Length=202, Percent_Identity=24.7524752475248, Blast_Score=63, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002771 [H]
Pfam domain/function: PF01914 MarC [H]
EC number: NA
Molecular weight: Translated: 24732; Mature: 24601
Theoretical pI: Translated: 9.57; Mature: 9.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLELLGAFGKSFLFVIAALLPIVNPAATAPIFLGLTEGASPTTRALLARRIARNMFWLL CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHH LGAMLVGSYVLEFFGISLPIVRVGGGMIVAATAWRLLTATQATVDSRTELAESFTPDMAR HHHHHHHHHHHHHHCCCCHHEEECCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH RQAFYPLTFPVSCGPGSIAAAITVGVSLADARLSMSLARMGGGVLALLSVAVLLYFAFRY HCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH AQQLLKPLGEAGSVIFLRLSAFILLCLGVQIVWDGVYELGVAMLRDGMLPLNS HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TLELLGAFGKSFLFVIAALLPIVNPAATAPIFLGLTEGASPTTRALLARRIARNMFWLL CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHH LGAMLVGSYVLEFFGISLPIVRVGGGMIVAATAWRLLTATQATVDSRTELAESFTPDMAR HHHHHHHHHHHHHHCCCCHHEEECCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH RQAFYPLTFPVSCGPGSIAAAITVGVSLADARLSMSLARMGGGVLALLSVAVLLYFAFRY HCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH AQQLLKPLGEAGSVIFLRLSAFILLCLGVQIVWDGVYELGVAMLRDGMLPLNS HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA