Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is yoeA [H]
Identifier: 120612524
GI number: 120612524
Start: 4307694
End: 4309259
Strand: Reverse
Name: yoeA [H]
Synonym: Aave_3884
Alternate gene names: 120612524
Gene position: 4309259-4307694 (Counterclockwise)
Preceding gene: 120612525
Following gene: 120612521
Centisome position: 80.51
GC content: 70.95
Gene sequence:
>1566_bases ATGCCCGCTTCGCCGCCCGTCCTCTCCAGCGCTCCTTCGAGCACCCCTGCAAACCCCTCATCCGCATCCACCCGCGCCCC GACGCGCGACCTGACGCAAGGCCCGATCGGCCGCACCCTGCTGGTCTTCGCGCTGCCCATCCTGGCAGGCAACGTGCTGC AGTCGCTGAACGGCTCGGTCAATGCGGTGTGGGTGGGCCGCTACCTGGGCGAGGCCGCGCTCACTGCCACGGCCAATGCC AACAACATCCTGTTCCTCTTGATCGGCGCGGTGTTCGGCGTGGGCATGGCGGCCACCATCCTCGTGGCGCAGGCCATGGG GGCGCGCGATCCGCAGCAGGCACGCCGTGTGATCGGCACCAGCGCCACCTTCTTCGGCGGCACGGCCGTGCTGATCGCGG CTGCCGGCCCGCCGCTCTCGCGCGAGATCCTGGGCTGGATGGGCACGCCCGCCACCGCCCTGCCGCTGGCAGAGGCCTAT CTGCGCACGCTGTTCCTGGCGGTGCCGCTGCTCTACCTGTTCGCCTTCATCTCGGCCGTGCTGCGCGGCGCGGGCGACAC GCGCACGCCGTTCCTCTTCCTGCTGCTGGTGGTGGCGCTGGACACGGCGCTGAATCCATTGCTCATCTTCGGCTGGGGCT CGGTGCCGCGCATGGGCATCGCCGGCTCTGCCATGGCCACCTTGGTGGCCAACGCGATCAGCTTCGCCGCGCTGCTGGCG TGGCTGCGCTGGCGCCGGCACCCGCTCTGGATCGGCCGGGCCGACTGGCGGCTCTTTGTGCCCGACGGGCCCATCCTGCG TGCGCTGGTCGTCAAGGGCCTGCCGATGGGCGCGCAGATGGTGATGATCTCCACCGCCATGCTGATGCTGATGGGCCTCG TCAACGCGCAGGGCGTGGTTACTGCATCGGCCTACGGCGCGGCGCTGCAGCTCTGGACCTACGTGCAGATGCCGGCCATG GCCATCGGGGCGGCCTGCTCGTCCATGGCGGCGCAGAACGTGGGCGCCGGCCGGTGGGAGCGGGTGGACGGCGTGGCCCG CGGCGGCACGCTCTTCAACTTCGTGCTGACCGGCGCGATCATCGTGCCGCTGGTGCTGCTGGACCGCACGGCGTTGTCGC TCTTCCTGCCCGCCGGCAGCGCGTCGCTGGAGGCGGCGCGCCATTTGAATCACATCGCCGTGGGCTCGTTCCTGTTCTTC GGCGTCACCTTCGTGCTCTCGGGCGTGGTGCGTTCCACCGGCGCGGTGATGCCACCACTCATCATCCTGGGCCTGGCGCT CTGGAGTATCCGCCTGCCGGTCGCCTATGGCCTGCAGCCCTGGCTGGGCACCGATGCGATCTGGTGGAGCTTTCCGGCCA GCGCGCTTTGCGCCATGCTGATGTCGATGGCCTACTACCGCTGGGGCCGCTGGCGCCAGGCACGCATGCTCACGCCTGCC GAGCCGGTGGTGGCGACCCCGGCCGAAGTGGGTGGCCTGCCGCCTGCGCCGGTCTGCGCGCAGGCAGGCGCAGCGCACGG GTCACCCGGCCGGCAGGCGGTGGTCGCGCACTCGCGCACCACATGA
Upstream 100 bases:
>100_bases GATCTCCCCGGCTGCCGGGCCGCGGCAAGATCGATCTTCGCAGCGCAGACATCAGGCATCGGCCGACAGCCTGCCCTGCA AGGCGTGGGCACGATACCGC
Downstream 100 bases:
>100_bases TGTCGGATCAGCACAGCACCGGCTCAGTCGGCATACTCCCCAGATGCCTTGATGGGACCCGCCCAGCGATTGATTTCCTC CTGCAGGTATCGGCGATGGC
Product: MATE efflux family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 521; Mature: 520
Protein sequence:
>521_residues MPASPPVLSSAPSSTPANPSSASTRAPTRDLTQGPIGRTLLVFALPILAGNVLQSLNGSVNAVWVGRYLGEAALTATANA NNILFLLIGAVFGVGMAATILVAQAMGARDPQQARRVIGTSATFFGGTAVLIAAAGPPLSREILGWMGTPATALPLAEAY LRTLFLAVPLLYLFAFISAVLRGAGDTRTPFLFLLLVVALDTALNPLLIFGWGSVPRMGIAGSAMATLVANAISFAALLA WLRWRRHPLWIGRADWRLFVPDGPILRALVVKGLPMGAQMVMISTAMLMLMGLVNAQGVVTASAYGAALQLWTYVQMPAM AIGAACSSMAAQNVGAGRWERVDGVARGGTLFNFVLTGAIIVPLVLLDRTALSLFLPAGSASLEAARHLNHIAVGSFLFF GVTFVLSGVVRSTGAVMPPLIILGLALWSIRLPVAYGLQPWLGTDAIWWSFPASALCAMLMSMAYYRWGRWRQARMLTPA EPVVATPAEVGGLPPAPVCAQAGAAHGSPGRQAVVAHSRTT
Sequences:
>Translated_521_residues MPASPPVLSSAPSSTPANPSSASTRAPTRDLTQGPIGRTLLVFALPILAGNVLQSLNGSVNAVWVGRYLGEAALTATANA NNILFLLIGAVFGVGMAATILVAQAMGARDPQQARRVIGTSATFFGGTAVLIAAAGPPLSREILGWMGTPATALPLAEAY LRTLFLAVPLLYLFAFISAVLRGAGDTRTPFLFLLLVVALDTALNPLLIFGWGSVPRMGIAGSAMATLVANAISFAALLA WLRWRRHPLWIGRADWRLFVPDGPILRALVVKGLPMGAQMVMISTAMLMLMGLVNAQGVVTASAYGAALQLWTYVQMPAM AIGAACSSMAAQNVGAGRWERVDGVARGGTLFNFVLTGAIIVPLVLLDRTALSLFLPAGSASLEAARHLNHIAVGSFLFF GVTFVLSGVVRSTGAVMPPLIILGLALWSIRLPVAYGLQPWLGTDAIWWSFPASALCAMLMSMAYYRWGRWRQARMLTPA EPVVATPAEVGGLPPAPVCAQAGAAHGSPGRQAVVAHSRTT >Mature_520_residues PASPPVLSSAPSSTPANPSSASTRAPTRDLTQGPIGRTLLVFALPILAGNVLQSLNGSVNAVWVGRYLGEAALTATANAN NILFLLIGAVFGVGMAATILVAQAMGARDPQQARRVIGTSATFFGGTAVLIAAAGPPLSREILGWMGTPATALPLAEAYL RTLFLAVPLLYLFAFISAVLRGAGDTRTPFLFLLLVVALDTALNPLLIFGWGSVPRMGIAGSAMATLVANAISFAALLAW LRWRRHPLWIGRADWRLFVPDGPILRALVVKGLPMGAQMVMISTAMLMLMGLVNAQGVVTASAYGAALQLWTYVQMPAMA IGAACSSMAAQNVGAGRWERVDGVARGGTLFNFVLTGAIIVPLVLLDRTALSLFLPAGSASLEAARHLNHIAVGSFLFFG VTFVLSGVVRSTGAVMPPLIILGLALWSIRLPVAYGLQPWLGTDAIWWSFPASALCAMLMSMAYYRWGRWRQARMLTPAE PVVATPAEVGGLPPAPVCAQAGAAHGSPGRQAVVAHSRTT
Specific function: Unknown
COG id: COG0534
COG function: function code V; Na+-driven multidrug efflux pump
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family [H]
Homologues:
Organism=Escherichia coli, GI226510954, Length=305, Percent_Identity=24.2622950819672, Blast_Score=65, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002528 - InterPro: IPR015522 [H]
Pfam domain/function: PF01554 MatE [H]
EC number: NA
Molecular weight: Translated: 54492; Mature: 54361
Theoretical pI: Translated: 11.59; Mature: 11.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPASPPVLSSAPSSTPANPSSASTRAPTRDLTQGPIGRTLLVFALPILAGNVLQSLNGSV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC NAVWVGRYLGEAALTATANANNILFLLIGAVFGVGMAATILVAQAMGARDPQQARRVIGT EEEEHHHHHCHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC SATFFGGTAVLIAAAGPPLSREILGWMGTPATALPLAEAYLRTLFLAVPLLYLFAFISAV CCCCCCCCEEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRGAGDTRTPFLFLLLVVALDTALNPLLIFGWGSVPRMGIAGSAMATLVANAISFAALLA HHCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHH WLRWRRHPLWIGRADWRLFVPDGPILRALVVKGLPMGAQMVMISTAMLMLMGLVNAQGVV HHHHCCCCEEEECCCCEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEE TASAYGAALQLWTYVQMPAMAIGAACSSMAAQNVGAGRWERVDGVARGGTLFNFVLTGAI EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHCCCHHHHHHHHHHH IVPLVLLDRTALSLFLPAGSASLEAARHLNHIAVGSFLFFGVTFVLSGVVRSTGAVMPPL HHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH IILGLALWSIRLPVAYGLQPWLGTDAIWWSFPASALCAMLMSMAYYRWGRWRQARMLTPA HHHHHHHHHHHCCHHHCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHCCCHHCCCCCCC EPVVATPAEVGGLPPAPVCAQAGAAHGSPGRQAVVAHSRTT CCCEECCHHHCCCCCCCHHHHCCCCCCCCCCCEEEECCCCC >Mature Secondary Structure PASPPVLSSAPSSTPANPSSASTRAPTRDLTQGPIGRTLLVFALPILAGNVLQSLNGSV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC NAVWVGRYLGEAALTATANANNILFLLIGAVFGVGMAATILVAQAMGARDPQQARRVIGT EEEEHHHHHCHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC SATFFGGTAVLIAAAGPPLSREILGWMGTPATALPLAEAYLRTLFLAVPLLYLFAFISAV CCCCCCCCEEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRGAGDTRTPFLFLLLVVALDTALNPLLIFGWGSVPRMGIAGSAMATLVANAISFAALLA HHCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHH WLRWRRHPLWIGRADWRLFVPDGPILRALVVKGLPMGAQMVMISTAMLMLMGLVNAQGVV HHHHCCCCEEEECCCCEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEE TASAYGAALQLWTYVQMPAMAIGAACSSMAAQNVGAGRWERVDGVARGGTLFNFVLTGAI EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHCCCHHHHHHHHHHH IVPLVLLDRTALSLFLPAGSASLEAARHLNHIAVGSFLFFGVTFVLSGVVRSTGAVMPPL HHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH IILGLALWSIRLPVAYGLQPWLGTDAIWWSFPASALCAMLMSMAYYRWGRWRQARMLTPA HHHHHHHHHHHCCHHHCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHCCCHHCCCCCCC EPVVATPAEVGGLPPAPVCAQAGAAHGSPGRQAVVAHSRTT CCCEECCHHHCCCCCCCHHHHCCCCCCCCCCCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]