Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

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The map label for this gene is yoeA [H]

Identifier: 120612524

GI number: 120612524

Start: 4307694

End: 4309259

Strand: Reverse

Name: yoeA [H]

Synonym: Aave_3884

Alternate gene names: 120612524

Gene position: 4309259-4307694 (Counterclockwise)

Preceding gene: 120612525

Following gene: 120612521

Centisome position: 80.51

GC content: 70.95

Gene sequence:

>1566_bases
ATGCCCGCTTCGCCGCCCGTCCTCTCCAGCGCTCCTTCGAGCACCCCTGCAAACCCCTCATCCGCATCCACCCGCGCCCC
GACGCGCGACCTGACGCAAGGCCCGATCGGCCGCACCCTGCTGGTCTTCGCGCTGCCCATCCTGGCAGGCAACGTGCTGC
AGTCGCTGAACGGCTCGGTCAATGCGGTGTGGGTGGGCCGCTACCTGGGCGAGGCCGCGCTCACTGCCACGGCCAATGCC
AACAACATCCTGTTCCTCTTGATCGGCGCGGTGTTCGGCGTGGGCATGGCGGCCACCATCCTCGTGGCGCAGGCCATGGG
GGCGCGCGATCCGCAGCAGGCACGCCGTGTGATCGGCACCAGCGCCACCTTCTTCGGCGGCACGGCCGTGCTGATCGCGG
CTGCCGGCCCGCCGCTCTCGCGCGAGATCCTGGGCTGGATGGGCACGCCCGCCACCGCCCTGCCGCTGGCAGAGGCCTAT
CTGCGCACGCTGTTCCTGGCGGTGCCGCTGCTCTACCTGTTCGCCTTCATCTCGGCCGTGCTGCGCGGCGCGGGCGACAC
GCGCACGCCGTTCCTCTTCCTGCTGCTGGTGGTGGCGCTGGACACGGCGCTGAATCCATTGCTCATCTTCGGCTGGGGCT
CGGTGCCGCGCATGGGCATCGCCGGCTCTGCCATGGCCACCTTGGTGGCCAACGCGATCAGCTTCGCCGCGCTGCTGGCG
TGGCTGCGCTGGCGCCGGCACCCGCTCTGGATCGGCCGGGCCGACTGGCGGCTCTTTGTGCCCGACGGGCCCATCCTGCG
TGCGCTGGTCGTCAAGGGCCTGCCGATGGGCGCGCAGATGGTGATGATCTCCACCGCCATGCTGATGCTGATGGGCCTCG
TCAACGCGCAGGGCGTGGTTACTGCATCGGCCTACGGCGCGGCGCTGCAGCTCTGGACCTACGTGCAGATGCCGGCCATG
GCCATCGGGGCGGCCTGCTCGTCCATGGCGGCGCAGAACGTGGGCGCCGGCCGGTGGGAGCGGGTGGACGGCGTGGCCCG
CGGCGGCACGCTCTTCAACTTCGTGCTGACCGGCGCGATCATCGTGCCGCTGGTGCTGCTGGACCGCACGGCGTTGTCGC
TCTTCCTGCCCGCCGGCAGCGCGTCGCTGGAGGCGGCGCGCCATTTGAATCACATCGCCGTGGGCTCGTTCCTGTTCTTC
GGCGTCACCTTCGTGCTCTCGGGCGTGGTGCGTTCCACCGGCGCGGTGATGCCACCACTCATCATCCTGGGCCTGGCGCT
CTGGAGTATCCGCCTGCCGGTCGCCTATGGCCTGCAGCCCTGGCTGGGCACCGATGCGATCTGGTGGAGCTTTCCGGCCA
GCGCGCTTTGCGCCATGCTGATGTCGATGGCCTACTACCGCTGGGGCCGCTGGCGCCAGGCACGCATGCTCACGCCTGCC
GAGCCGGTGGTGGCGACCCCGGCCGAAGTGGGTGGCCTGCCGCCTGCGCCGGTCTGCGCGCAGGCAGGCGCAGCGCACGG
GTCACCCGGCCGGCAGGCGGTGGTCGCGCACTCGCGCACCACATGA

Upstream 100 bases:

>100_bases
GATCTCCCCGGCTGCCGGGCCGCGGCAAGATCGATCTTCGCAGCGCAGACATCAGGCATCGGCCGACAGCCTGCCCTGCA
AGGCGTGGGCACGATACCGC

Downstream 100 bases:

>100_bases
TGTCGGATCAGCACAGCACCGGCTCAGTCGGCATACTCCCCAGATGCCTTGATGGGACCCGCCCAGCGATTGATTTCCTC
CTGCAGGTATCGGCGATGGC

Product: MATE efflux family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 521; Mature: 520

Protein sequence:

>521_residues
MPASPPVLSSAPSSTPANPSSASTRAPTRDLTQGPIGRTLLVFALPILAGNVLQSLNGSVNAVWVGRYLGEAALTATANA
NNILFLLIGAVFGVGMAATILVAQAMGARDPQQARRVIGTSATFFGGTAVLIAAAGPPLSREILGWMGTPATALPLAEAY
LRTLFLAVPLLYLFAFISAVLRGAGDTRTPFLFLLLVVALDTALNPLLIFGWGSVPRMGIAGSAMATLVANAISFAALLA
WLRWRRHPLWIGRADWRLFVPDGPILRALVVKGLPMGAQMVMISTAMLMLMGLVNAQGVVTASAYGAALQLWTYVQMPAM
AIGAACSSMAAQNVGAGRWERVDGVARGGTLFNFVLTGAIIVPLVLLDRTALSLFLPAGSASLEAARHLNHIAVGSFLFF
GVTFVLSGVVRSTGAVMPPLIILGLALWSIRLPVAYGLQPWLGTDAIWWSFPASALCAMLMSMAYYRWGRWRQARMLTPA
EPVVATPAEVGGLPPAPVCAQAGAAHGSPGRQAVVAHSRTT

Sequences:

>Translated_521_residues
MPASPPVLSSAPSSTPANPSSASTRAPTRDLTQGPIGRTLLVFALPILAGNVLQSLNGSVNAVWVGRYLGEAALTATANA
NNILFLLIGAVFGVGMAATILVAQAMGARDPQQARRVIGTSATFFGGTAVLIAAAGPPLSREILGWMGTPATALPLAEAY
LRTLFLAVPLLYLFAFISAVLRGAGDTRTPFLFLLLVVALDTALNPLLIFGWGSVPRMGIAGSAMATLVANAISFAALLA
WLRWRRHPLWIGRADWRLFVPDGPILRALVVKGLPMGAQMVMISTAMLMLMGLVNAQGVVTASAYGAALQLWTYVQMPAM
AIGAACSSMAAQNVGAGRWERVDGVARGGTLFNFVLTGAIIVPLVLLDRTALSLFLPAGSASLEAARHLNHIAVGSFLFF
GVTFVLSGVVRSTGAVMPPLIILGLALWSIRLPVAYGLQPWLGTDAIWWSFPASALCAMLMSMAYYRWGRWRQARMLTPA
EPVVATPAEVGGLPPAPVCAQAGAAHGSPGRQAVVAHSRTT
>Mature_520_residues
PASPPVLSSAPSSTPANPSSASTRAPTRDLTQGPIGRTLLVFALPILAGNVLQSLNGSVNAVWVGRYLGEAALTATANAN
NILFLLIGAVFGVGMAATILVAQAMGARDPQQARRVIGTSATFFGGTAVLIAAAGPPLSREILGWMGTPATALPLAEAYL
RTLFLAVPLLYLFAFISAVLRGAGDTRTPFLFLLLVVALDTALNPLLIFGWGSVPRMGIAGSAMATLVANAISFAALLAW
LRWRRHPLWIGRADWRLFVPDGPILRALVVKGLPMGAQMVMISTAMLMLMGLVNAQGVVTASAYGAALQLWTYVQMPAMA
IGAACSSMAAQNVGAGRWERVDGVARGGTLFNFVLTGAIIVPLVLLDRTALSLFLPAGSASLEAARHLNHIAVGSFLFFG
VTFVLSGVVRSTGAVMPPLIILGLALWSIRLPVAYGLQPWLGTDAIWWSFPASALCAMLMSMAYYRWGRWRQARMLTPAE
PVVATPAEVGGLPPAPVCAQAGAAHGSPGRQAVVAHSRTT

Specific function: Unknown

COG id: COG0534

COG function: function code V; Na+-driven multidrug efflux pump

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family [H]

Homologues:

Organism=Escherichia coli, GI226510954, Length=305, Percent_Identity=24.2622950819672, Blast_Score=65, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002528
- InterPro:   IPR015522 [H]

Pfam domain/function: PF01554 MatE [H]

EC number: NA

Molecular weight: Translated: 54492; Mature: 54361

Theoretical pI: Translated: 11.59; Mature: 11.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPASPPVLSSAPSSTPANPSSASTRAPTRDLTQGPIGRTLLVFALPILAGNVLQSLNGSV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
NAVWVGRYLGEAALTATANANNILFLLIGAVFGVGMAATILVAQAMGARDPQQARRVIGT
EEEEHHHHHCHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC
SATFFGGTAVLIAAAGPPLSREILGWMGTPATALPLAEAYLRTLFLAVPLLYLFAFISAV
CCCCCCCCEEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRGAGDTRTPFLFLLLVVALDTALNPLLIFGWGSVPRMGIAGSAMATLVANAISFAALLA
HHCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHH
WLRWRRHPLWIGRADWRLFVPDGPILRALVVKGLPMGAQMVMISTAMLMLMGLVNAQGVV
HHHHCCCCEEEECCCCEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEE
TASAYGAALQLWTYVQMPAMAIGAACSSMAAQNVGAGRWERVDGVARGGTLFNFVLTGAI
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHCCCHHHHHHHHHHH
IVPLVLLDRTALSLFLPAGSASLEAARHLNHIAVGSFLFFGVTFVLSGVVRSTGAVMPPL
HHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
IILGLALWSIRLPVAYGLQPWLGTDAIWWSFPASALCAMLMSMAYYRWGRWRQARMLTPA
HHHHHHHHHHHCCHHHCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHCCCHHCCCCCCC
EPVVATPAEVGGLPPAPVCAQAGAAHGSPGRQAVVAHSRTT
CCCEECCHHHCCCCCCCHHHHCCCCCCCCCCCEEEECCCCC
>Mature Secondary Structure 
PASPPVLSSAPSSTPANPSSASTRAPTRDLTQGPIGRTLLVFALPILAGNVLQSLNGSV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
NAVWVGRYLGEAALTATANANNILFLLIGAVFGVGMAATILVAQAMGARDPQQARRVIGT
EEEEHHHHHCHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC
SATFFGGTAVLIAAAGPPLSREILGWMGTPATALPLAEAYLRTLFLAVPLLYLFAFISAV
CCCCCCCCEEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRGAGDTRTPFLFLLLVVALDTALNPLLIFGWGSVPRMGIAGSAMATLVANAISFAALLA
HHCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHH
WLRWRRHPLWIGRADWRLFVPDGPILRALVVKGLPMGAQMVMISTAMLMLMGLVNAQGVV
HHHHCCCCEEEECCCCEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEE
TASAYGAALQLWTYVQMPAMAIGAACSSMAAQNVGAGRWERVDGVARGGTLFNFVLTGAI
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHCCCHHHHHHHHHHH
IVPLVLLDRTALSLFLPAGSASLEAARHLNHIAVGSFLFFGVTFVLSGVVRSTGAVMPPL
HHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
IILGLALWSIRLPVAYGLQPWLGTDAIWWSFPASALCAMLMSMAYYRWGRWRQARMLTPA
HHHHHHHHHHHCCHHHCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHCCCHHCCCCCCC
EPVVATPAEVGGLPPAPVCAQAGAAHGSPGRQAVVAHSRTT
CCCEECCHHHCCCCCCCHHHHCCCCCCCCCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]