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The map label for this gene is glxA [H]

Identifier: 120612521

GI number: 120612521

Start: 4305022

End: 4305903

Strand: Reverse

Name: glxA [H]

Synonym: Aave_3881

Alternate gene names: 120612521

Gene position: 4305903-4305022 (Counterclockwise)

Preceding gene: 120612524

Following gene: 120612517

Centisome position: 80.44

GC content: 61.9

Gene sequence:

>882_bases
GTGGCGTTTCTGGTGTTTCCGAACTTTCAGCCAATTGACCTCAGCGGCCCTTGGCAAGCCTTCGCGACGGCCAATGAAGA
GCTTGCGCAAATGCGCTATGAACTGAGCACATTCGGCCCCGAAGCAACGGCATCGACCAGCGATGGAGGACTGCGCATCC
TGACCGGCCATTCGCTCGCGGAATCGGTGAAATGGCAGCCTCACACGCTGGTCATTCCCGGTGGAGAAGGTGTGCATGCG
GCTGCCGGAAACCCCGCTTTGCTCACCTGCCTGAGGGAGCTGGATCTCACGACCGAGCGGACCTGCAGCGTGTGCACGGG
CGCGTTCCTGCTGGCAGCCACGGGAATGCTGGACAGGCATCGGGTGACAACCCATTGGCGCACGGCAGAACGGTTACGCC
GGGAGTTCCCGCAACTGGATGTGGCAGACGAGCAGATCTTTTGCGAGAGTGGAAAGTATTGGACCACTGCCGGGGTTACT
GCCGGCATCGACCTGGCACTCGCACTGGTCGAGCGTGACTGCGGCAAGCTCATTGCCCAGCGCGTGGCGCGGCGCCTTGT
CGTCTATTTGCGCCGTACGGGGGACCAGCGGCAGTACAGCCAGACGCTCCGGCTGCAAGACAGGGCAGGCGCGCCGTTCG
GCAAACTGGTTGAGAAAATCGAGGCCCGGTTATCCTTGCCCTGGACGGTGGACGACATGGCGATGGAGTGCAACATGTCG
CGGCGCACCTTCCAGCGGAAATTCAAGGAGAGCTTCGGTGTAGGACCGTCCGATGTCGTCAAAATCCTGCGCGCCGAGCG
AGAACAGCAACTTCTCAATGCCGGGCACCTGCCCAGGAAAGAGGTGGCCCGCCAAATTGGATCCCCGACCATTCGCCGGT
GA

Upstream 100 bases:

>100_bases
TAGAAAGTTCACTTGCATGAAGACGCTCCTTAAAAACCAGACTCTAAAATTGAGGTCCGTTCTGGGTGCGCCAAAAACGG
AAGCCATTGCGCCAATTCGG

Downstream 100 bases:

>100_bases
TTCAAAACCGCGGTGGTAATGGCGGCACCATTCGCGGCAGGTTTGAAAATATCGATTGGCCTGCGAGCAGGGTGCCCCGC
GCGTCGCCCACGATTTCACG

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 292

Protein sequence:

>293_residues
MAFLVFPNFQPIDLSGPWQAFATANEELAQMRYELSTFGPEATASTSDGGLRILTGHSLAESVKWQPHTLVIPGGEGVHA
AAGNPALLTCLRELDLTTERTCSVCTGAFLLAATGMLDRHRVTTHWRTAERLRREFPQLDVADEQIFCESGKYWTTAGVT
AGIDLALALVERDCGKLIAQRVARRLVVYLRRTGDQRQYSQTLRLQDRAGAPFGKLVEKIEARLSLPWTVDDMAMECNMS
RRTFQRKFKESFGVGPSDVVKILRAEREQQLLNAGHLPRKEVARQIGSPTIRR

Sequences:

>Translated_293_residues
MAFLVFPNFQPIDLSGPWQAFATANEELAQMRYELSTFGPEATASTSDGGLRILTGHSLAESVKWQPHTLVIPGGEGVHA
AAGNPALLTCLRELDLTTERTCSVCTGAFLLAATGMLDRHRVTTHWRTAERLRREFPQLDVADEQIFCESGKYWTTAGVT
AGIDLALALVERDCGKLIAQRVARRLVVYLRRTGDQRQYSQTLRLQDRAGAPFGKLVEKIEARLSLPWTVDDMAMECNMS
RRTFQRKFKESFGVGPSDVVKILRAEREQQLLNAGHLPRKEVARQIGSPTIRR
>Mature_292_residues
AFLVFPNFQPIDLSGPWQAFATANEELAQMRYELSTFGPEATASTSDGGLRILTGHSLAESVKWQPHTLVIPGGEGVHAA
AGNPALLTCLRELDLTTERTCSVCTGAFLLAATGMLDRHRVTTHWRTAERLRREFPQLDVADEQIFCESGKYWTTAGVTA
GIDLALALVERDCGKLIAQRVARRLVVYLRRTGDQRQYSQTLRLQDRAGAPFGKLVEKIEARLSLPWTVDDMAMECNMSR
RTFQRKFKESFGVGPSDVVKILRAEREQQLLNAGHLPRKEVARQIGSPTIRR

Specific function: Unknown

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 32696; Mature: 32565

Theoretical pI: Translated: 8.83; Mature: 8.83

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFLVFPNFQPIDLSGPWQAFATANEELAQMRYELSTFGPEATASTSDGGLRILTGHSLA
CEEEECCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCHHH
ESVKWQPHTLVIPGGEGVHAAAGNPALLTCLRELDLTTERTCSVCTGAFLLAATGMLDRH
HHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHH
RVTTHWRTAERLRREFPQLDVADEQIFCESGKYWTTAGVTAGIDLALALVERDCGKLIAQ
HHHHHHHHHHHHHHHCCCCCCCCCHHEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHH
RVARRLVVYLRRTGDQRQYSQTLRLQDRAGAPFGKLVEKIEARLSLPWTVDDMAMECNMS
HHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCH
RRTFQRKFKESFGVGPSDVVKILRAEREQQLLNAGHLPRKEVARQIGSPTIRR
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCC
>Mature Secondary Structure 
AFLVFPNFQPIDLSGPWQAFATANEELAQMRYELSTFGPEATASTSDGGLRILTGHSLA
EEEECCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCHHH
ESVKWQPHTLVIPGGEGVHAAAGNPALLTCLRELDLTTERTCSVCTGAFLLAATGMLDRH
HHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHH
RVTTHWRTAERLRREFPQLDVADEQIFCESGKYWTTAGVTAGIDLALALVERDCGKLIAQ
HHHHHHHHHHHHHHHCCCCCCCCCHHEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHH
RVARRLVVYLRRTGDQRQYSQTLRLQDRAGAPFGKLVEKIEARLSLPWTVDDMAMECNMS
HHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCH
RRTFQRKFKESFGVGPSDVVKILRAEREQQLLNAGHLPRKEVARQIGSPTIRR
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]