Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612506
Identifier: 120612506
GI number: 120612506
Start: 4290888
End: 4291283
Strand: Direct
Name: 120612506
Synonym: Aave_3865
Alternate gene names: NA
Gene position: 4290888-4291283 (Clockwise)
Preceding gene: 120612505
Following gene: 120612507
Centisome position: 80.16
GC content: 68.94
Gene sequence:
>396_bases ATGGAAGCACAAAAATTCGCCGACAAGGCTGCAGATACCGCGCACGATGTGGCCGGCGACATGCTGGACAACGCCCAGGA TGCCGTGCGCACCACCCGTGATGCAGCCAACAAGACCCTGGACAAGGCGGAACGCAAGGTGCGGGAGCTGCAGAGCGACG TGGACCCCGTGATCGACGATCTCGCCGCCCGGGCCCAGGATCTTGCGTCCCGCGGCATCGCCTACTGCGCCGACACCAGC GAGCGCGCCCGCCGGCAATTCAACCAGGCCGCCGATGCCACCGCCCGCTACGTCGCGGAACAGCCCGGCAAGTCGCTGGC CATTGCGGCGGCGGCAGGCGCCTTCGTGGCCACGCTGTGCATGCTGGCACGCCGCCCCCGCGGCCGCGACTACTGA
Upstream 100 bases:
>100_bases TCGTGATCATGGCCGTCGTCACTTTCGTGCTGAGCCTGCTCAAGCGCGGCTGACCGCACCGCCCCGCCCTGACGACCCGA CTACCTGAGGAACAGAAACC
Downstream 100 bases:
>100_bases TCTCCCGGCCTCCCGACGCGGGACCGGAAACGGAAGCCTCCAGCAGCCCTCCACCACCGGCCCGCCCCATATCCACAAAA ACATTCCACGGGCGCTCCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 131; Mature: 131
Protein sequence:
>131_residues MEAQKFADKAADTAHDVAGDMLDNAQDAVRTTRDAANKTLDKAERKVRELQSDVDPVIDDLAARAQDLASRGIAYCADTS ERARRQFNQAADATARYVAEQPGKSLAIAAAAGAFVATLCMLARRPRGRDY
Sequences:
>Translated_131_residues MEAQKFADKAADTAHDVAGDMLDNAQDAVRTTRDAANKTLDKAERKVRELQSDVDPVIDDLAARAQDLASRGIAYCADTS ERARRQFNQAADATARYVAEQPGKSLAIAAAAGAFVATLCMLARRPRGRDY >Mature_131_residues MEAQKFADKAADTAHDVAGDMLDNAQDAVRTTRDAANKTLDKAERKVRELQSDVDPVIDDLAARAQDLASRGIAYCADTS ERARRQFNQAADATARYVAEQPGKSLAIAAAAGAFVATLCMLARRPRGRDY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14143; Mature: 14143
Theoretical pI: Translated: 5.94; Mature: 5.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEAQKFADKAADTAHDVAGDMLDNAQDAVRTTRDAANKTLDKAERKVRELQSDVDPVIDD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAARAQDLASRGIAYCADTSERARRQFNQAADATARYVAEQPGKSLAIAAAAGAFVATLC HHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH MLARRPRGRDY HHHCCCCCCCC >Mature Secondary Structure MEAQKFADKAADTAHDVAGDMLDNAQDAVRTTRDAANKTLDKAERKVRELQSDVDPVIDD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAARAQDLASRGIAYCADTSERARRQFNQAADATARYVAEQPGKSLAIAAAAGAFVATLC HHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH MLARRPRGRDY HHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA