Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612507
Identifier: 120612507
GI number: 120612507
Start: 4291382
End: 4291936
Strand: Direct
Name: 120612507
Synonym: Aave_3866
Alternate gene names: NA
Gene position: 4291382-4291936 (Clockwise)
Preceding gene: 120612506
Following gene: 120612508
Centisome position: 80.17
GC content: 64.5
Gene sequence:
>555_bases ATGACCATCCCGAACCCCACAACTACGGCAACTGCATCGCTCACCCTGGACGAAAAAGCCCTTCGGTACGCGGCCACCCA GGACCTCGACGAAGGTGCCGTCACACCTGCGTACGGTCCGCACCGCGACGCCATCGTGAAGCTGCTGAACGATGCTCTGG CGACCGAACTCGTGTGCGTGCTGCGCTACAAGCGCCACTATTTCACGGCCGACGGTCTGGAGTCCCCCGCGATCGCCGCG GAATTCCTGGTGCACGCGAACGAGGAAGCGGCCCACGCCGACCTCATTGCCCAGCGGATCGTGCAACTGGGCGGCGAACC GGATTTCCGGCCCCGCACGCTGGAAGAACGCAGCCACGCGCAGTACGACGAGTCCTCCGACCTGAAGGCCATGGTGCGCG CCAACCTCGTGGCGGAACGCATCGCAGTGGAAGCGTACCGCCAGATGATCACCCTGATCGGCGACAAGGATCCCACCACG CGCCGCATGCTGGAAGGCATCCTCGCCGACGAGGAAGAGCATGCCGACGAACTCAAGGATTGGCTGCACCGCTGA
Upstream 100 bases:
>100_bases GATCTCCCGGCCTCCCGACGCGGGACCGGAAACGGAAGCCTCCAGCAGCCCTCCACCACCGGCCCGCCCCATATCCACAA AAACATTCCACGGGCGCTCC
Downstream 100 bases:
>100_bases AGGAGCGGCCAGCCCTGGCAGACGGTCCACCGGCAAGGAGGGTGCAGAAAGCCGGCGGACCGAAGGATGTCCCCAGCACC CGTGTTCTCTCAACCAAACC
Product: Ferritin, Dps family protein
Products: NA
Alternate protein names: Bacterioferritin; Ferritin And Dps; Ferritin-Like Domain Subfamily; Bacterioferritin-Like Domain-Containing Protein; Rubrerythrin Family Protein; RubrerythrinFerritin And Dps
Number of amino acids: Translated: 184; Mature: 183
Protein sequence:
>184_residues MTIPNPTTTATASLTLDEKALRYAATQDLDEGAVTPAYGPHRDAIVKLLNDALATELVCVLRYKRHYFTADGLESPAIAA EFLVHANEEAAHADLIAQRIVQLGGEPDFRPRTLEERSHAQYDESSDLKAMVRANLVAERIAVEAYRQMITLIGDKDPTT RRMLEGILADEEEHADELKDWLHR
Sequences:
>Translated_184_residues MTIPNPTTTATASLTLDEKALRYAATQDLDEGAVTPAYGPHRDAIVKLLNDALATELVCVLRYKRHYFTADGLESPAIAA EFLVHANEEAAHADLIAQRIVQLGGEPDFRPRTLEERSHAQYDESSDLKAMVRANLVAERIAVEAYRQMITLIGDKDPTT RRMLEGILADEEEHADELKDWLHR >Mature_183_residues TIPNPTTTATASLTLDEKALRYAATQDLDEGAVTPAYGPHRDAIVKLLNDALATELVCVLRYKRHYFTADGLESPAIAAE FLVHANEEAAHADLIAQRIVQLGGEPDFRPRTLEERSHAQYDESSDLKAMVRANLVAERIAVEAYRQMITLIGDKDPTTR RMLEGILADEEEHADELKDWLHR
Specific function: Unknown
COG id: COG2193
COG function: function code P; Bacterioferritin (cytochrome b1)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20549; Mature: 20418
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: PS50905 FERRITIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIPNPTTTATASLTLDEKALRYAATQDLDEGAVTPAYGPHRDAIVKLLNDALATELVCV CCCCCCCCCCEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH LRYKRHYFTADGLESPAIAAEFLVHANEEAAHADLIAQRIVQLGGEPDFRPRTLEERSHA HHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHC QYDESSDLKAMVRANLVAERIAVEAYRQMITLIGDKDPTTRRMLEGILADEEEHADELKD CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHH WLHR HHCC >Mature Secondary Structure TIPNPTTTATASLTLDEKALRYAATQDLDEGAVTPAYGPHRDAIVKLLNDALATELVCV CCCCCCCCCEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH LRYKRHYFTADGLESPAIAAEFLVHANEEAAHADLIAQRIVQLGGEPDFRPRTLEERSHA HHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHC QYDESSDLKAMVRANLVAERIAVEAYRQMITLIGDKDPTTRRMLEGILADEEEHADELKD CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHH WLHR HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA