Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

Click here to switch to the map view.

The map label for this gene is 120612507

Identifier: 120612507

GI number: 120612507

Start: 4291382

End: 4291936

Strand: Direct

Name: 120612507

Synonym: Aave_3866

Alternate gene names: NA

Gene position: 4291382-4291936 (Clockwise)

Preceding gene: 120612506

Following gene: 120612508

Centisome position: 80.17

GC content: 64.5

Gene sequence:

>555_bases
ATGACCATCCCGAACCCCACAACTACGGCAACTGCATCGCTCACCCTGGACGAAAAAGCCCTTCGGTACGCGGCCACCCA
GGACCTCGACGAAGGTGCCGTCACACCTGCGTACGGTCCGCACCGCGACGCCATCGTGAAGCTGCTGAACGATGCTCTGG
CGACCGAACTCGTGTGCGTGCTGCGCTACAAGCGCCACTATTTCACGGCCGACGGTCTGGAGTCCCCCGCGATCGCCGCG
GAATTCCTGGTGCACGCGAACGAGGAAGCGGCCCACGCCGACCTCATTGCCCAGCGGATCGTGCAACTGGGCGGCGAACC
GGATTTCCGGCCCCGCACGCTGGAAGAACGCAGCCACGCGCAGTACGACGAGTCCTCCGACCTGAAGGCCATGGTGCGCG
CCAACCTCGTGGCGGAACGCATCGCAGTGGAAGCGTACCGCCAGATGATCACCCTGATCGGCGACAAGGATCCCACCACG
CGCCGCATGCTGGAAGGCATCCTCGCCGACGAGGAAGAGCATGCCGACGAACTCAAGGATTGGCTGCACCGCTGA

Upstream 100 bases:

>100_bases
GATCTCCCGGCCTCCCGACGCGGGACCGGAAACGGAAGCCTCCAGCAGCCCTCCACCACCGGCCCGCCCCATATCCACAA
AAACATTCCACGGGCGCTCC

Downstream 100 bases:

>100_bases
AGGAGCGGCCAGCCCTGGCAGACGGTCCACCGGCAAGGAGGGTGCAGAAAGCCGGCGGACCGAAGGATGTCCCCAGCACC
CGTGTTCTCTCAACCAAACC

Product: Ferritin, Dps family protein

Products: NA

Alternate protein names: Bacterioferritin; Ferritin And Dps; Ferritin-Like Domain Subfamily; Bacterioferritin-Like Domain-Containing Protein; Rubrerythrin Family Protein; RubrerythrinFerritin And Dps

Number of amino acids: Translated: 184; Mature: 183

Protein sequence:

>184_residues
MTIPNPTTTATASLTLDEKALRYAATQDLDEGAVTPAYGPHRDAIVKLLNDALATELVCVLRYKRHYFTADGLESPAIAA
EFLVHANEEAAHADLIAQRIVQLGGEPDFRPRTLEERSHAQYDESSDLKAMVRANLVAERIAVEAYRQMITLIGDKDPTT
RRMLEGILADEEEHADELKDWLHR

Sequences:

>Translated_184_residues
MTIPNPTTTATASLTLDEKALRYAATQDLDEGAVTPAYGPHRDAIVKLLNDALATELVCVLRYKRHYFTADGLESPAIAA
EFLVHANEEAAHADLIAQRIVQLGGEPDFRPRTLEERSHAQYDESSDLKAMVRANLVAERIAVEAYRQMITLIGDKDPTT
RRMLEGILADEEEHADELKDWLHR
>Mature_183_residues
TIPNPTTTATASLTLDEKALRYAATQDLDEGAVTPAYGPHRDAIVKLLNDALATELVCVLRYKRHYFTADGLESPAIAAE
FLVHANEEAAHADLIAQRIVQLGGEPDFRPRTLEERSHAQYDESSDLKAMVRANLVAERIAVEAYRQMITLIGDKDPTTR
RMLEGILADEEEHADELKDWLHR

Specific function: Unknown

COG id: COG2193

COG function: function code P; Bacterioferritin (cytochrome b1)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20549; Mature: 20418

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: PS50905 FERRITIN_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIPNPTTTATASLTLDEKALRYAATQDLDEGAVTPAYGPHRDAIVKLLNDALATELVCV
CCCCCCCCCCEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
LRYKRHYFTADGLESPAIAAEFLVHANEEAAHADLIAQRIVQLGGEPDFRPRTLEERSHA
HHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHC
QYDESSDLKAMVRANLVAERIAVEAYRQMITLIGDKDPTTRRMLEGILADEEEHADELKD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHH
WLHR
HHCC
>Mature Secondary Structure 
TIPNPTTTATASLTLDEKALRYAATQDLDEGAVTPAYGPHRDAIVKLLNDALATELVCV
CCCCCCCCCEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
LRYKRHYFTADGLESPAIAAEFLVHANEEAAHADLIAQRIVQLGGEPDFRPRTLEERSHA
HHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHC
QYDESSDLKAMVRANLVAERIAVEAYRQMITLIGDKDPTTRRMLEGILADEEEHADELKD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHH
WLHR
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA