| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is nodH [H]
Identifier: 120612361
GI number: 120612361
Start: 4105497
End: 4106489
Strand: Reverse
Name: nodH [H]
Synonym: Aave_3718
Alternate gene names: 120612361
Gene position: 4106489-4105497 (Counterclockwise)
Preceding gene: 120612362
Following gene: 120612360
Centisome position: 76.72
GC content: 60.62
Gene sequence:
>993_bases ATGTCCTGTGGCGAGAGCGAGCTTGCCACGCGCATCCGGAGTGATATCGAGGAATACGCGGTCGGCCATGACCTGGCATC GGCCATCGTCGCATTCGTGCACGAATACCGCGCCGGCGGGAAGAACTGGAGCCGCACAGGGCTGCGCGGAGACGAGGCAC TGGCGCCCCTGCGGGCCCTCGCGGAGCGCTCGCCCGGGATATTCGAACTCATGCGTGCCCAGGTCGCACAGGCCGAGCAC AACAAATGGCTGGGCGGCAGCCTGCCCGAAGACGTCGCCACCGCGCAGAAGCAATATACGAAATTCGCCATTGTTTCGAC GCCGCGCTCCGGCACGCATCTCCTGCGGACGCTGCTCGGCTCACATCCGTGCATCGAGATGCACGGCGAGGCATTCAACC GGTTCGGCCAGCACCTGCTTCCGTATGCACAGGAAACCACCGCGCAGCACATCCTCGACCGGCATCTGTTCCGGCCGTAC TTCGAATACGTGGAAGCCGTGGGTTTCGTGCTTTTCCGGGATCTCGACACCGAATGGGCTGGTGCAAACATATGGGAGTC CCTGGTGGGCCTGCAGGACCTGAAGATCATCCTGCTGGATCGACGCAACCGGCTCGAGCGCCTGGTGTCGCTGAAGAAAA GCCTGCGGGACCAGATCTGGTATGTCGGTCGCGACGACAGGAGGCACAGGCAGGAAATCAGGCTGACCATCCCACCAGCG GAACTCATCGAATTCATCGACCAGGATCTTGCCAATCGGGCCGAATTCCTCGACTGCTTCAGCCGCCACGAAATCCTCAC CGTCGAATACGAAGACCTGCTCGAAAATCCCGGGCCCGTGCATGCGCAATTGATCGATTTTCTCGGGGTATCGGCCGCGA GGCTCGTCCCCGGAACAGGAAAAAAAGAAACATCGTCGATGGCATCGGCGATCGAGAACATTCATCAATTGAAATCCGAA CTTCAGGGGACGCCGTATGCACGCCATGTCTAG
Upstream 100 bases:
>100_bases AAGCGCTCCCGGCCGCTCCCATTCACCAGTCCGTGCATCCAGCACAGTGCAGATGACGGATACCACGGGACACGTGCCGG CATCCTGGTGGTCTTCATGG
Downstream 100 bases:
>100_bases ATTCCGCGGTTACTGGCCGCCTTATACCCCCATGGGCTGCGATGACCATCGGCCAAAGATCGTGCGGGGCGAAGGAGCCT ATCTCTACGACGATGCAGGG
Product: sulfotransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 330; Mature: 329
Protein sequence:
>330_residues MSCGESELATRIRSDIEEYAVGHDLASAIVAFVHEYRAGGKNWSRTGLRGDEALAPLRALAERSPGIFELMRAQVAQAEH NKWLGGSLPEDVATAQKQYTKFAIVSTPRSGTHLLRTLLGSHPCIEMHGEAFNRFGQHLLPYAQETTAQHILDRHLFRPY FEYVEAVGFVLFRDLDTEWAGANIWESLVGLQDLKIILLDRRNRLERLVSLKKSLRDQIWYVGRDDRRHRQEIRLTIPPA ELIEFIDQDLANRAEFLDCFSRHEILTVEYEDLLENPGPVHAQLIDFLGVSAARLVPGTGKKETSSMASAIENIHQLKSE LQGTPYARHV
Sequences:
>Translated_330_residues MSCGESELATRIRSDIEEYAVGHDLASAIVAFVHEYRAGGKNWSRTGLRGDEALAPLRALAERSPGIFELMRAQVAQAEH NKWLGGSLPEDVATAQKQYTKFAIVSTPRSGTHLLRTLLGSHPCIEMHGEAFNRFGQHLLPYAQETTAQHILDRHLFRPY FEYVEAVGFVLFRDLDTEWAGANIWESLVGLQDLKIILLDRRNRLERLVSLKKSLRDQIWYVGRDDRRHRQEIRLTIPPA ELIEFIDQDLANRAEFLDCFSRHEILTVEYEDLLENPGPVHAQLIDFLGVSAARLVPGTGKKETSSMASAIENIHQLKSE LQGTPYARHV >Mature_329_residues SCGESELATRIRSDIEEYAVGHDLASAIVAFVHEYRAGGKNWSRTGLRGDEALAPLRALAERSPGIFELMRAQVAQAEHN KWLGGSLPEDVATAQKQYTKFAIVSTPRSGTHLLRTLLGSHPCIEMHGEAFNRFGQHLLPYAQETTAQHILDRHLFRPYF EYVEAVGFVLFRDLDTEWAGANIWESLVGLQDLKIILLDRRNRLERLVSLKKSLRDQIWYVGRDDRRHRQEIRLTIPPAE LIEFIDQDLANRAEFLDCFSRHEILTVEYEDLLENPGPVHAQLIDFLGVSAARLVPGTGKKETSSMASAIENIHQLKSEL QGTPYARHV
Specific function: Required for the formation of sulfated nod factor. Proposed to transfer activated sulfate (PAPS) to a N- acetylglucosamine of the nod factor [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000863 [H]
Pfam domain/function: PF00685 Sulfotransfer_1 [H]
EC number: NA
Molecular weight: Translated: 37402; Mature: 37271
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSCGESELATRIRSDIEEYAVGHDLASAIVAFVHEYRAGGKNWSRTGLRGDEALAPLRAL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH AERSPGIFELMRAQVAQAEHNKWLGGSLPEDVATAQKQYTKFAIVSTPRSGTHLLRTLLG HHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHEEEEECCCCHHHHHHHHHC SHPCIEMHGEAFNRFGQHLLPYAQETTAQHILDRHLFRPYFEYVEAVGFVLFRDLDTEWA CCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC GANIWESLVGLQDLKIILLDRRNRLERLVSLKKSLRDQIWYVGRDDRRHRQEIRLTIPPA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHEEEECCHH ELIEFIDQDLANRAEFLDCFSRHEILTVEYEDLLENPGPVHAQLIDFLGVSAARLVPGTG HHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHCCCCCHHHHHHHHHCCHHHHHCCCCC KKETSSMASAIENIHQLKSELQGTPYARHV CHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SCGESELATRIRSDIEEYAVGHDLASAIVAFVHEYRAGGKNWSRTGLRGDEALAPLRAL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH AERSPGIFELMRAQVAQAEHNKWLGGSLPEDVATAQKQYTKFAIVSTPRSGTHLLRTLLG HHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHEEEEECCCCHHHHHHHHHC SHPCIEMHGEAFNRFGQHLLPYAQETTAQHILDRHLFRPYFEYVEAVGFVLFRDLDTEWA CCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC GANIWESLVGLQDLKIILLDRRNRLERLVSLKKSLRDQIWYVGRDDRRHRQEIRLTIPPA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHEEEECCHH ELIEFIDQDLANRAEFLDCFSRHEILTVEYEDLLENPGPVHAQLIDFLGVSAARLVPGTG HHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHCCCCCHHHHHHHHHCCHHHHHCCCCC KKETSSMASAIENIHQLKSELQGTPYARHV CHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8755625; 8850086 [H]