| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120612357
Identifier: 120612357
GI number: 120612357
Start: 4102479
End: 4102853
Strand: Reverse
Name: 120612357
Synonym: Aave_3714
Alternate gene names: NA
Gene position: 4102853-4102479 (Counterclockwise)
Preceding gene: 120612358
Following gene: 120612344
Centisome position: 76.65
GC content: 68.27
Gene sequence:
>375_bases TTGTCGCGAGACTCGGATCGAGCCCTCGCCGGGCTCGTGGCCTTCCTACTGGCCATGTGGCTGCTGCACGAGGCCGCCAC GTGGCTGGAGCTGCGCATGGTCTCGCCCGCGCGCACCATCACGCCGCTGGAGCAGATGGTCCACAGCTTCATGGAGATCC TGCCCCTGGCAGGCATCCTGCTGCTCTGCCAGCCGGCCCTGGAGGTGTGGCTGGCGGTGCCGGAGGAGGGCACCAGGGGC ACGGCGCTGGATTGGCGCTGGCGGATGCGTTCGGAACTGCCGCCCTGGCCGGTGCTGGGGAGCTTTGCCGTGGCTATCGC GGTGTGCAATGGGCTGCTGCTGTCGAACGGAGAGGGCCATGATTCCCTCATGTAG
Upstream 100 bases:
>100_bases TTCAGAACCCCTGACCCGAGCGGGCAGCGTAGAGCATCGGGGGTAGGTGCGCACATACCAGTGACTTGACTGGGCCATGG TGCCTCGACTGGGGTGAGGG
Downstream 100 bases:
>100_bases CTTCGGTATCTGAAGGAGTGCTTTCGTCTCAATGGAGACCCAGCGCCCACCCGAGCTATTGCTAAACAACCAAAATTCAA CGCTACATAAATACTCAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 124; Mature: 123
Protein sequence:
>124_residues MSRDSDRALAGLVAFLLAMWLLHEAATWLELRMVSPARTITPLEQMVHSFMEILPLAGILLLCQPALEVWLAVPEEGTRG TALDWRWRMRSELPPWPVLGSFAVAIAVCNGLLLSNGEGHDSLM
Sequences:
>Translated_124_residues MSRDSDRALAGLVAFLLAMWLLHEAATWLELRMVSPARTITPLEQMVHSFMEILPLAGILLLCQPALEVWLAVPEEGTRG TALDWRWRMRSELPPWPVLGSFAVAIAVCNGLLLSNGEGHDSLM >Mature_123_residues SRDSDRALAGLVAFLLAMWLLHEAATWLELRMVSPARTITPLEQMVHSFMEILPLAGILLLCQPALEVWLAVPEEGTRGT ALDWRWRMRSELPPWPVLGSFAVAIAVCNGLLLSNGEGHDSLM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13748; Mature: 13617
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRDSDRALAGLVAFLLAMWLLHEAATWLELRMVSPARTITPLEQMVHSFMEILPLAGIL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH LLCQPALEVWLAVPEEGTRGTALDWRWRMRSELPPWPVLGSFAVAIAVCNGLLLSNGEGH HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC DSLM CCCC >Mature Secondary Structure SRDSDRALAGLVAFLLAMWLLHEAATWLELRMVSPARTITPLEQMVHSFMEILPLAGIL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH LLCQPALEVWLAVPEEGTRGTALDWRWRMRSELPPWPVLGSFAVAIAVCNGLLLSNGEGH HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC DSLM CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA