| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is 120612331
Identifier: 120612331
GI number: 120612331
Start: 4063304
End: 4064176
Strand: Reverse
Name: 120612331
Synonym: Aave_3687
Alternate gene names: NA
Gene position: 4064176-4063304 (Counterclockwise)
Preceding gene: 120612332
Following gene: 120612330
Centisome position: 75.93
GC content: 67.93
Gene sequence:
>873_bases ATGAACGATCGCTTCGACCACCTCCTGCAGCGCGCCGAGCAGCTCATCGACCGCATCGAGTCGGTGCTGCCCAGGCCGCT TTCGGCACCCGACTGGAACGCCTCCGTGGCCTGGCGCTACCGCCGCCGCGGCGGTGGGCACGGCGCCCTGGAACCCGTGC GGCACGTCGCGGGCATCGCGCTCGAAGACCTGAAGGAAATCGACGCGCAGAAGGAAAAGATCGAGCGCAACACCCGGCAG TTCGTCGAAGGGCGCCCGGCCAACAACGTGCTGCTCACGGGCGCGCGCGGCACCGGCAAATCCTCCCTCATCAAGGCCTG CCTGCAGGCCTACTCCGGGCAGGGGCTGCGGCTCATCGAAGTGGACAAGTCCGATCTCACCGACCTGCCCGACATCGTCG ATGTGGTGGCCGGCCGTCCCGAGAAATTCATCATCTACTGCGACGACCTGAGCTTCGAGGAGGGCGAGTCCGGCTACAAG GCGCTGAAGTCCATCCTGGACGGCTCCGTGGCCGCCTCGGCGCCCAACGTGCTGGTCTATGCGACCAGCAACCGCCGGCA CCTGTTGCCGGAATACATGAAGGAAAACCTCAGTTACACGCATACGGCGGACGGCGAGGTGCATCCGGGCGAGGTGGTGG AAGAGAAGATCTCGCTGTCCGAGCGCTTCGGCCTCTGGGTGAGCTTCTACCCCTTCAGCCAGGACGAATACCTGGCCATC GTAGCGCAGTGGCTGTCCGCGCTCGGCGTGCCGGCCGCGTCCATCGAGGCGGCCCGCCCCGCCGCGCTGGTCTGGGCGCT GGAGCGCGGCTCGCGCAGCGGCCGGGTGGCCTACCAGTTCGCGCGGGACTTCGCGGGGCGCGCCGATGGCTGA
Upstream 100 bases:
>100_bases TGGGCCGCGGCGACGCCGCCGATACGGTCTGGACCTGCGACCTGAGCCACGAATACGTGACCATCAACGCCGACTACCGC TCCTGATCCCTGTTCATCCC
Downstream 100 bases:
>100_bases GTCCGTCGCATCCGGCGCCCAGCGCGCCCACACCGAGGTGGCGGTCGGCATCCTGTTCCGCCCCGATGGCGCCATGCTGC TGTCCACGCGGCCGCCCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: ATP-Dependent Protease Subunit; AAA ATPase Family Protein; AAA Family ATPase; ABC Transporter ATPase; ATPase Family Protein; ATPase Of AAA+ Class; Intermediate Filament Protein; AAA+ Superfamily ATPase; AAA ATPase Superfamily
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MNDRFDHLLQRAEQLIDRIESVLPRPLSAPDWNASVAWRYRRRGGGHGALEPVRHVAGIALEDLKEIDAQKEKIERNTRQ FVEGRPANNVLLTGARGTGKSSLIKACLQAYSGQGLRLIEVDKSDLTDLPDIVDVVAGRPEKFIIYCDDLSFEEGESGYK ALKSILDGSVAASAPNVLVYATSNRRHLLPEYMKENLSYTHTADGEVHPGEVVEEKISLSERFGLWVSFYPFSQDEYLAI VAQWLSALGVPAASIEAARPAALVWALERGSRSGRVAYQFARDFAGRADG
Sequences:
>Translated_290_residues MNDRFDHLLQRAEQLIDRIESVLPRPLSAPDWNASVAWRYRRRGGGHGALEPVRHVAGIALEDLKEIDAQKEKIERNTRQ FVEGRPANNVLLTGARGTGKSSLIKACLQAYSGQGLRLIEVDKSDLTDLPDIVDVVAGRPEKFIIYCDDLSFEEGESGYK ALKSILDGSVAASAPNVLVYATSNRRHLLPEYMKENLSYTHTADGEVHPGEVVEEKISLSERFGLWVSFYPFSQDEYLAI VAQWLSALGVPAASIEAARPAALVWALERGSRSGRVAYQFARDFAGRADG >Mature_290_residues MNDRFDHLLQRAEQLIDRIESVLPRPLSAPDWNASVAWRYRRRGGGHGALEPVRHVAGIALEDLKEIDAQKEKIERNTRQ FVEGRPANNVLLTGARGTGKSSLIKACLQAYSGQGLRLIEVDKSDLTDLPDIVDVVAGRPEKFIIYCDDLSFEEGESGYK ALKSILDGSVAASAPNVLVYATSNRRHLLPEYMKENLSYTHTADGEVHPGEVVEEKISLSERFGLWVSFYPFSQDEYLAI VAQWLSALGVPAASIEAARPAALVWALERGSRSGRVAYQFARDFAGRADG
Specific function: Unknown
COG id: COG2607
COG function: function code R; Predicted ATPase (AAA+ superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32067; Mature: 32067
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDRFDHLLQRAEQLIDRIESVLPRPLSAPDWNASVAWRYRRRGGGHGALEPVRHVAGIA CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHCCCCCCHHHHHHHHHHHH LEDLKEIDAQKEKIERNTRQFVEGRPANNVLLTGARGTGKSSLIKACLQAYSGQGLRLIE HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCEEEEE VDKSDLTDLPDIVDVVAGRPEKFIIYCDDLSFEEGESGYKALKSILDGSVAASAPNVLVY ECCCCCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCHHCCCCCEEEE ATSNRRHLLPEYMKENLSYTHTADGEVHPGEVVEEKISLSERFGLWVSFYPFSQDEYLAI EECCCCCCCHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHH VAQWLSALGVPAASIEAARPAALVWALERGSRSGRVAYQFARDFAGRADG HHHHHHHHCCCHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCC >Mature Secondary Structure MNDRFDHLLQRAEQLIDRIESVLPRPLSAPDWNASVAWRYRRRGGGHGALEPVRHVAGIA CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHCCCCCCHHHHHHHHHHHH LEDLKEIDAQKEKIERNTRQFVEGRPANNVLLTGARGTGKSSLIKACLQAYSGQGLRLIE HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCEEEEE VDKSDLTDLPDIVDVVAGRPEKFIIYCDDLSFEEGESGYKALKSILDGSVAASAPNVLVY ECCCCCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCHHCCCCCEEEE ATSNRRHLLPEYMKENLSYTHTADGEVHPGEVVEEKISLSERFGLWVSFYPFSQDEYLAI EECCCCCCCHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHH VAQWLSALGVPAASIEAARPAALVWALERGSRSGRVAYQFARDFAGRADG HHHHHHHHCCCHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA