| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120612288
Identifier: 120612288
GI number: 120612288
Start: 4016805
End: 4017836
Strand: Reverse
Name: 120612288
Synonym: Aave_3643
Alternate gene names: NA
Gene position: 4017836-4016805 (Counterclockwise)
Preceding gene: 120612289
Following gene: 120612287
Centisome position: 75.06
GC content: 71.9
Gene sequence:
>1032_bases ATGATGAAATTCTGGTCTGTGGCTTTGGTGGCGATGCTCGCGGTGGTGCACCTCGATGCCGACGCCCGCCGCATGGGCGG CGGCAAGTCGGTGGGCAAGCAGTCGAGCAACGTGACGCAGCGCGAGGCCGCGACCCCGCCGGCCACGCCCGCGGGCCCCA CGCAGAACGCGGTGGGCAACAGCCCCGCCAACGCAGCCGCGGCGAAGCCGGCGGCGGCACCGAACGCGGCGCCCGCCGCC GCCCCCAAGAAGCCGTGGGGCGCGATGCTGGGCGGCCTGGCCGCCGGCCTGGGCCTGGCGTGGCTGGCCCACTCCCTCGG CCTGGGCGAGGCCTTCGGCAATTTCCTGCTGATCGCGCTGCTCGCGCTCGTGGCCTTCGCGGTGATCGGCATGGTCATGC GTTCGCGCAGGCCTTCTTCCGCTGCGGCGATGGGCGGCGCGCCCTTCGCCTTCCAGGGGGCCGGGTCCGCATCCCCCTCC GATGCGGCCGTACCCCGGCAGTACAGCCCGCAGAACGTGGGCAACGATGCCTCCGCGCGCCCCTTCGAGCGCAGCGGCAT GGCGTTCGACGCGTCCCGTACCGGCGGCGCGGGCAGCGGGGTGGTGATCGGCTCGGGCCTGTCCGGTTCGCAAAACTGGG GTATTCCCGCCGACTTCGACACGCAGGGCTTCCTGGACGCCGCCAAGCGCAACTTCGTGACGCTGCAGGCCGCCTGGGAC CGCTCGGACATCGCCACGCTGCGCTCGATGATGACCGACAGCATGGTCGATGAGATCCGCGCGCAGCTCGGCGAGCGCGA AGCCCTGCGCGGGGCCAGCCAGCCCAACCACACGGACGTGGTGATGCTGGAGGCGCAGCTGCTGGGCATCGAGGACCTGG GCGACGGCTACATGGCCAGCGTCGAGTTCTCCGGCATGATCCGCGAGGAGCTCTCTGCCGGCCCGAGCCCGTTCCGCGAG GTCTGGAACATGACCAAGCCCAAGAGCGGCACCAGCGGCTGGCTGGTGGCGGGCGTGCAGGCGCTCCAGTGA
Upstream 100 bases:
>100_bases ATCACAACATGACTGGCGGTATCGTGGCCCTGCATGTTGGAATCAAGTGCTGAACTGGACGAAGCGCACGCTTTCGATAA CTAAACCGAGTGGAGATGAC
Downstream 100 bases:
>100_bases AACCGGCGGGGCCGGTCCGCCGCGCGGCGGGCCGGGCTCCAATGGCACGGACCGTGTACGGGCAAGCTTTCGGGCATCCG GGCGAGTTCGGGGAATAATC
Product: import inner membrane translocase subunit Tim44
Products: NA
Alternate protein names: Tim44 Domain Protein; Transmembrane Protein; Hypothtical Protein; Import Inner Membrane Translocase Subunit; Tim44-Like Domain-Containing Protein; Tim44-Like Domain Protein
Number of amino acids: Translated: 343; Mature: 343
Protein sequence:
>343_residues MMKFWSVALVAMLAVVHLDADARRMGGGKSVGKQSSNVTQREAATPPATPAGPTQNAVGNSPANAAAAKPAAAPNAAPAA APKKPWGAMLGGLAAGLGLAWLAHSLGLGEAFGNFLLIALLALVAFAVIGMVMRSRRPSSAAAMGGAPFAFQGAGSASPS DAAVPRQYSPQNVGNDASARPFERSGMAFDASRTGGAGSGVVIGSGLSGSQNWGIPADFDTQGFLDAAKRNFVTLQAAWD RSDIATLRSMMTDSMVDEIRAQLGEREALRGASQPNHTDVVMLEAQLLGIEDLGDGYMASVEFSGMIREELSAGPSPFRE VWNMTKPKSGTSGWLVAGVQALQ
Sequences:
>Translated_343_residues MMKFWSVALVAMLAVVHLDADARRMGGGKSVGKQSSNVTQREAATPPATPAGPTQNAVGNSPANAAAAKPAAAPNAAPAA APKKPWGAMLGGLAAGLGLAWLAHSLGLGEAFGNFLLIALLALVAFAVIGMVMRSRRPSSAAAMGGAPFAFQGAGSASPS DAAVPRQYSPQNVGNDASARPFERSGMAFDASRTGGAGSGVVIGSGLSGSQNWGIPADFDTQGFLDAAKRNFVTLQAAWD RSDIATLRSMMTDSMVDEIRAQLGEREALRGASQPNHTDVVMLEAQLLGIEDLGDGYMASVEFSGMIREELSAGPSPFRE VWNMTKPKSGTSGWLVAGVQALQ >Mature_343_residues MMKFWSVALVAMLAVVHLDADARRMGGGKSVGKQSSNVTQREAATPPATPAGPTQNAVGNSPANAAAAKPAAAPNAAPAA APKKPWGAMLGGLAAGLGLAWLAHSLGLGEAFGNFLLIALLALVAFAVIGMVMRSRRPSSAAAMGGAPFAFQGAGSASPS DAAVPRQYSPQNVGNDASARPFERSGMAFDASRTGGAGSGVVIGSGLSGSQNWGIPADFDTQGFLDAAKRNFVTLQAAWD RSDIATLRSMMTDSMVDEIRAQLGEREALRGASQPNHTDVVMLEAQLLGIEDLGDGYMASVEFSGMIREELSAGPSPFRE VWNMTKPKSGTSGWLVAGVQALQ
Specific function: Unknown
COG id: COG4395
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35213; Mature: 35213
Theoretical pI: Translated: 7.78; Mature: 7.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKFWSVALVAMLAVVHLDADARRMGGGKSVGKQSSNVTQREAATPPATPAGPTQNAVGN CCHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCC SPANAAAAKPAAAPNAAPAAAPKKPWGAMLGGLAAGLGLAWLAHSLGLGEAFGNFLLIAL CCCCHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH LALVAFAVIGMVMRSRRPSSAAAMGGAPFAFQGAGSASPSDAAVPRQYSPQNVGNDASAR HHHHHHHHHHHHHHCCCCCHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC PFERSGMAFDASRTGGAGSGVVIGSGLSGSQNWGIPADFDTQGFLDAAKRNFVTLQAAWD CHHHCCCEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEEECCC RSDIATLRSMMTDSMVDEIRAQLGEREALRGASQPNHTDVVMLEAQLLGIEDLGDGYMAS HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCEEEEEEHHHHCHHHCCCCEEEE VEFSGMIREELSAGPSPFREVWNMTKPKSGTSGWLVAGVQALQ EHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHCC >Mature Secondary Structure MMKFWSVALVAMLAVVHLDADARRMGGGKSVGKQSSNVTQREAATPPATPAGPTQNAVGN CCHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCC SPANAAAAKPAAAPNAAPAAAPKKPWGAMLGGLAAGLGLAWLAHSLGLGEAFGNFLLIAL CCCCHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH LALVAFAVIGMVMRSRRPSSAAAMGGAPFAFQGAGSASPSDAAVPRQYSPQNVGNDASAR HHHHHHHHHHHHHHCCCCCHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC PFERSGMAFDASRTGGAGSGVVIGSGLSGSQNWGIPADFDTQGFLDAAKRNFVTLQAAWD CHHHCCCEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEEECCC RSDIATLRSMMTDSMVDEIRAQLGEREALRGASQPNHTDVVMLEAQLLGIEDLGDGYMAS HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCEEEEEEHHHHCHHHCCCCEEEE VEFSGMIREELSAGPSPFREVWNMTKPKSGTSGWLVAGVQALQ EHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA