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The map label for this gene is fdx [H]

Identifier: 120612260

GI number: 120612260

Start: 3986179

End: 3986472

Strand: Reverse

Name: fdx [H]

Synonym: Aave_3613

Alternate gene names: 120612260

Gene position: 3986472-3986179 (Counterclockwise)

Preceding gene: 120612268

Following gene: 120612253

Centisome position: 74.47

GC content: 65.99

Gene sequence:

>294_bases
ATGGCCCTGATGATCACCGACGAGTGCATCAACTGCGACGTGTGCGAGCCCGAGTGCCCCAACCACGCCATCTACCTGGG
CGAGGCCACCTACGAGATCGACCCGGACAAATGCACGGAGTGCGTGGGGCACTTCGACGAGCCGCAGTGCGTGCAGATCT
GCCCCGTGGCCTGCATCCCGGTCAACCCCCTGCATGTCGAGAGCCGCGAGACGCTCATGCAGAAGTACGTGCGCCTGGCC
GGGGCGGCAGCAGGTCCAGGGGCTCCGGAACGTCCCTCCGAAACCTCCGGATAG

Upstream 100 bases:

>100_bases
CCGGCCCCTGGCACGGCATGGGGATGGCGGGCTGGGATAATCCTTCCATGACGCCCGTTTCCCGCACGCCCACCGTGCGC
CGCTCCATCCGGAGGCACCC

Downstream 100 bases:

>100_bases
CGCGCGGGGCCGTGCACCGCGGCGCGAACCCGCCTACTGGTCGCCAGGAGCCGCAGGCGCGTCCACCGGTGCCGCAGCCG
GCCGTGGGGGCTTGGGCCGC

Product: 4Fe-4S ferredoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 97; Mature: 96

Protein sequence:

>97_residues
MALMITDECINCDVCEPECPNHAIYLGEATYEIDPDKCTECVGHFDEPQCVQICPVACIPVNPLHVESRETLMQKYVRLA
GAAAGPGAPERPSETSG

Sequences:

>Translated_97_residues
MALMITDECINCDVCEPECPNHAIYLGEATYEIDPDKCTECVGHFDEPQCVQICPVACIPVNPLHVESRETLMQKYVRLA
GAAAGPGAPERPSETSG
>Mature_96_residues
ALMITDECINCDVCEPECPNHAIYLGEATYEIDPDKCTECVGHFDEPQCVQICPVACIPVNPLHVESRETLMQKYVRLAG
AAAGPGAPERPSETSG

Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]

COG id: COG1145

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1788914, Length=83, Percent_Identity=55.421686746988, Blast_Score=98, Evalue=8e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10494; Mature: 10363

Theoretical pI: Translated: 4.06; Mature: 4.06

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

9.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
12.4 %Cys+Met (Translated Protein)
9.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
11.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALMITDECINCDVCEPECPNHAIYLGEATYEIDPDKCTECVGHFDEPQCVQICPVACIP
CEEEECCCCCCCCCCCCCCCCCEEEECCCEEEECHHHHHHHHCCCCCCCEEEECCEEECC
VNPLHVESRETLMQKYVRLAGAAAGPGAPERPSETSG
CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ALMITDECINCDVCEPECPNHAIYLGEATYEIDPDKCTECVGHFDEPQCVQICPVACIP
EEEECCCCCCCCCCCCCCCCCEEEECCCEEEECHHHHHHHHCCCCCCCEEEECCEEECC
VNPLHVESRETLMQKYVRLAGAAAGPGAPERPSETSG
CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8765743; 893371; 8880900 [H]