Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
---|---|
Accession | NC_008752 |
Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is 120612268
Identifier: 120612268
GI number: 120612268
Start: 3992941
End: 3994848
Strand: Reverse
Name: 120612268
Synonym: Aave_3621
Alternate gene names: NA
Gene position: 3994848-3992941 (Counterclockwise)
Preceding gene: 120612269
Following gene: 120612260
Centisome position: 74.63
GC content: 64.68
Gene sequence:
>1908_bases ATGCAGGTGTCGCTCGCGGAGCAATCATCCCGGGAGGTCAATCCACAGATGGCCGTGGACCTGGTGAACCGCTTACGTCC GCTCATGAGGCAGATACCCACGCACTCGGATCTCATGAGGGAGGTGTCGGAAACCGATGTAGAGGCATGGTACGGAGCCC AGGGCCTGGACCGAGAGGATGTGGATGCACTGCAGCGCAGCGCTTTCCTGTCAGGCTTGCCGAATCCCACCGGATCGTTC ATGAACAATGCGCTGCAATATATCGTCTCGCCGTGGGTCAACTACGCCACGGGCAATCCCTGGGCCGGCGCCGGGATCGG GTTCGGCACGGCCGCCATCGCTGCTCCCATGAACGCCCTGCAGCAGTCGGCCGTCGTGACCCTGTGCGAGTCGCTTCGCG AACGCCACGGCCCGGTGATCGTTCCCGACAAGAAGAACATCAACGACAGGCACTGGCTGCCCGAACTCTCCAAAGCGCTG GAACACGAAGTCGTTCAGTTCAGCGCCCTGCACGACCGGATGCGCGCTACGCTGGCAGAGCACGGCATCCAGGCGTCCCT GGGAGGTCCACCCGACGCCGTGCTCGCGGCGCTTTCCGGGCTCACCCGCGAGGCGCGCCAAGAACTGCACCTGCAGGCGA GGCAGTGGCTGGACTCCGAGAAGAAACTGCACAAGACCCATGGAGAATTCATGATGACGCAGGGAGCGCATGAACGCCAA TGGATGGGCAACAGATGGCAGTTCGTGCCCCGGACCTTGCGTTCCCCTGCAGCCAGCCTGCTGGGGCTGGTGGGCAAGTC GGGAGCCGCCCGGGTCCTGCCGCCCACGCTGCAGGTGGTGGCCTCACTCATGCTGACGGCAGCCCAGCACGTCGCCGCGG GTTTCGACGAAAGGGCCAAGCAGGAATACAACAATGTCCTGAACCTGCTCTACGGACAATTCTTCACCGCTTCGGGTGCC GACAAGCTGGCCCGTGGGCAGCCATTGGACGCGGATGACATCGATACCGCAAAGCTCCGGGGTTTCATCTCGATGCCGAT GCAGTCCCTGGTCAAGCGTGTTTCAGCGGAGGTGGAGCGGCAGGTGACAACCTTGCGGGGCCTGCTGGCCGATCGTCCGC CGGCCGCCGGGCAGGGCGAGACCGACAGTCGGGCGAGCGATCAGGCGGCCCTCGCCGGCATGGAGAACGATGCGACGCTG CTCCGGGAAGGGCGGTTGTCGGAATTGGACCCCGACGGACTCGCGCAGTCCCTTCTCCTCGCATCGGAAAAGTCGGTGCT CTCAGAGCAGCTATGGCGGGATCTCGTTGCCAAGTACACGGTGAAGGAGTTTTCCGCGCAGACCGCGCAGCGGCTCGGGC AGGCCTTCCACCTCGGGGTCTTCGGCAGTGCCGCGTCCTCGATCATCGGCAAGGTGACGTCCGCGGCATCCGGAGGCACG CGGCAGGCCCCGGTCGCGCAGACCGTGGGGGTGTCGGTGCTGTCCGGTGTCATGGCGGCCATCGGGGCGAGCAACCAGCA CACTGCCATTTCCGTCAAGAACAACCGGCGAGAGGGCGAAGTCGATGTCGGTCTGGGGAAGCAAGTGCTGCGCGGCGTCA TGGGCGGCCTGAGCGAATCGCTGGCCCAACGCCGCGGATCACGTGCGGGTCAGGACATGAAGGCTTTGCTGGCCCAGGAC CAGATCGGGAACCTGCTGGGTTTCGTTAAATTACTGAACCAGCAGTTGAGCGCAGAATTCGACGTCGCGCCCGAGACCCT CTCCCTGTCCGAGGCTGGCAGGGTACTGGGTCCGGGCCATGCCTCTGCAGCGGGTGCGACGGAAATAGTGATCGAGATGG ACCAAGACCAGGCCACGTCCGGGACGCCCCTGACTGCGTCGTCTCATCCGCCCGTCAGCGACAGGTAG
Upstream 100 bases:
>100_bases TGGAGGCAGGCATTACCGAGCGCGGGGAGCCCTGCAGGCGGAGCGGGGCGGTGCGATTGCTTCCACACCACCGGCCGCAC GGCGCGCAGCTCTGCAGCGT
Downstream 100 bases:
>100_bases GCCCGCCGCGTCTCCGGCGATACCGATTCCACCAACTGCTGGTGCGGCGTACGGTGGCGGGCCACCATGCGCGCCGAGGC CACCGTCTTCGACTTGCAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 635; Mature: 635
Protein sequence:
>635_residues MQVSLAEQSSREVNPQMAVDLVNRLRPLMRQIPTHSDLMREVSETDVEAWYGAQGLDREDVDALQRSAFLSGLPNPTGSF MNNALQYIVSPWVNYATGNPWAGAGIGFGTAAIAAPMNALQQSAVVTLCESLRERHGPVIVPDKKNINDRHWLPELSKAL EHEVVQFSALHDRMRATLAEHGIQASLGGPPDAVLAALSGLTREARQELHLQARQWLDSEKKLHKTHGEFMMTQGAHERQ WMGNRWQFVPRTLRSPAASLLGLVGKSGAARVLPPTLQVVASLMLTAAQHVAAGFDERAKQEYNNVLNLLYGQFFTASGA DKLARGQPLDADDIDTAKLRGFISMPMQSLVKRVSAEVERQVTTLRGLLADRPPAAGQGETDSRASDQAALAGMENDATL LREGRLSELDPDGLAQSLLLASEKSVLSEQLWRDLVAKYTVKEFSAQTAQRLGQAFHLGVFGSAASSIIGKVTSAASGGT RQAPVAQTVGVSVLSGVMAAIGASNQHTAISVKNNRREGEVDVGLGKQVLRGVMGGLSESLAQRRGSRAGQDMKALLAQD QIGNLLGFVKLLNQQLSAEFDVAPETLSLSEAGRVLGPGHASAAGATEIVIEMDQDQATSGTPLTASSHPPVSDR
Sequences:
>Translated_635_residues MQVSLAEQSSREVNPQMAVDLVNRLRPLMRQIPTHSDLMREVSETDVEAWYGAQGLDREDVDALQRSAFLSGLPNPTGSF MNNALQYIVSPWVNYATGNPWAGAGIGFGTAAIAAPMNALQQSAVVTLCESLRERHGPVIVPDKKNINDRHWLPELSKAL EHEVVQFSALHDRMRATLAEHGIQASLGGPPDAVLAALSGLTREARQELHLQARQWLDSEKKLHKTHGEFMMTQGAHERQ WMGNRWQFVPRTLRSPAASLLGLVGKSGAARVLPPTLQVVASLMLTAAQHVAAGFDERAKQEYNNVLNLLYGQFFTASGA DKLARGQPLDADDIDTAKLRGFISMPMQSLVKRVSAEVERQVTTLRGLLADRPPAAGQGETDSRASDQAALAGMENDATL LREGRLSELDPDGLAQSLLLASEKSVLSEQLWRDLVAKYTVKEFSAQTAQRLGQAFHLGVFGSAASSIIGKVTSAASGGT RQAPVAQTVGVSVLSGVMAAIGASNQHTAISVKNNRREGEVDVGLGKQVLRGVMGGLSESLAQRRGSRAGQDMKALLAQD QIGNLLGFVKLLNQQLSAEFDVAPETLSLSEAGRVLGPGHASAAGATEIVIEMDQDQATSGTPLTASSHPPVSDR >Mature_635_residues MQVSLAEQSSREVNPQMAVDLVNRLRPLMRQIPTHSDLMREVSETDVEAWYGAQGLDREDVDALQRSAFLSGLPNPTGSF MNNALQYIVSPWVNYATGNPWAGAGIGFGTAAIAAPMNALQQSAVVTLCESLRERHGPVIVPDKKNINDRHWLPELSKAL EHEVVQFSALHDRMRATLAEHGIQASLGGPPDAVLAALSGLTREARQELHLQARQWLDSEKKLHKTHGEFMMTQGAHERQ WMGNRWQFVPRTLRSPAASLLGLVGKSGAARVLPPTLQVVASLMLTAAQHVAAGFDERAKQEYNNVLNLLYGQFFTASGA DKLARGQPLDADDIDTAKLRGFISMPMQSLVKRVSAEVERQVTTLRGLLADRPPAAGQGETDSRASDQAALAGMENDATL LREGRLSELDPDGLAQSLLLASEKSVLSEQLWRDLVAKYTVKEFSAQTAQRLGQAFHLGVFGSAASSIIGKVTSAASGGT RQAPVAQTVGVSVLSGVMAAIGASNQHTAISVKNNRREGEVDVGLGKQVLRGVMGGLSESLAQRRGSRAGQDMKALLAQD QIGNLLGFVKLLNQQLSAEFDVAPETLSLSEAGRVLGPGHASAAGATEIVIEMDQDQATSGTPLTASSHPPVSDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68012; Mature: 68012
Theoretical pI: Translated: 6.58; Mature: 6.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQVSLAEQSSREVNPQMAVDLVNRLRPLMRQIPTHSDLMREVSETDVEAWYGAQGLDRED CCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHH VDALQRSAFLSGLPNPTGSFMNNALQYIVSPWVNYATGNPWAGAGIGFGTAAIAAPMNAL HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH QQSAVVTLCESLRERHGPVIVPDKKNINDRHWLPELSKALEHEVVQFSALHDRMRATLAE HHHHHHHHHHHHHHHCCCEEECCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH HGIQASLGGPPDAVLAALSGLTREARQELHLQARQWLDSEKKLHKTHGEFMMTQGAHERQ CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCHHHH WMGNRWQFVPRTLRSPAASLLGLVGKSGAARVLPPTLQVVASLMLTAAQHVAAGFDERAK HCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHH QEYNNVLNLLYGQFFTASGADKLARGQPLDADDIDTAKLRGFISMPMQSLVKRVSAEVER HHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH QVTTLRGLLADRPPAAGQGETDSRASDQAALAGMENDATLLREGRLSELDPDGLAQSLLL HHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHCCCCCCCCHHHHHHHHHH ASEKSVLSEQLWRDLVAKYTVKEFSAQTAQRLGQAFHLGVFGSAASSIIGKVTSAASGGT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC RQAPVAQTVGVSVLSGVMAAIGASNQHTAISVKNNRREGEVDVGLGKQVLRGVMGGLSES CCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHH LAQRRGSRAGQDMKALLAQDQIGNLLGFVKLLNQQLSAEFDVAPETLSLSEAGRVLGPGH HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCHHHCCCCCCCCC ASAAGATEIVIEMDQDQATSGTPLTASSHPPVSDR CCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MQVSLAEQSSREVNPQMAVDLVNRLRPLMRQIPTHSDLMREVSETDVEAWYGAQGLDRED CCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHH VDALQRSAFLSGLPNPTGSFMNNALQYIVSPWVNYATGNPWAGAGIGFGTAAIAAPMNAL HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH QQSAVVTLCESLRERHGPVIVPDKKNINDRHWLPELSKALEHEVVQFSALHDRMRATLAE HHHHHHHHHHHHHHHCCCEEECCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH HGIQASLGGPPDAVLAALSGLTREARQELHLQARQWLDSEKKLHKTHGEFMMTQGAHERQ CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCHHHH WMGNRWQFVPRTLRSPAASLLGLVGKSGAARVLPPTLQVVASLMLTAAQHVAAGFDERAK HCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHH QEYNNVLNLLYGQFFTASGADKLARGQPLDADDIDTAKLRGFISMPMQSLVKRVSAEVER HHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH QVTTLRGLLADRPPAAGQGETDSRASDQAALAGMENDATLLREGRLSELDPDGLAQSLLL HHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHCCCCCCCCHHHHHHHHHH ASEKSVLSEQLWRDLVAKYTVKEFSAQTAQRLGQAFHLGVFGSAASSIIGKVTSAASGGT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC RQAPVAQTVGVSVLSGVMAAIGASNQHTAISVKNNRREGEVDVGLGKQVLRGVMGGLSES CCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHH LAQRRGSRAGQDMKALLAQDQIGNLLGFVKLLNQQLSAEFDVAPETLSLSEAGRVLGPGH HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCHHHCCCCCCCCC ASAAGATEIVIEMDQDQATSGTPLTASSHPPVSDR CCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA