Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612236
Identifier: 120612236
GI number: 120612236
Start: 3959891
End: 3960568
Strand: Direct
Name: 120612236
Synonym: Aave_3589
Alternate gene names: NA
Gene position: 3959891-3960568 (Clockwise)
Preceding gene: 120612232
Following gene: 120612238
Centisome position: 73.98
GC content: 65.49
Gene sequence:
>678_bases ATGCATGAGAGCACCGCCCGCCTTTACCAAGCCGCGTCCGAGATCAGGGATGTTGCAGGCCAGTCCGCAGTAGCCCGGCT GCTCGGTGAGTCGCCCCAGAATCTCAAGAACTGGGAGGTGCGGGGAGTTTCCAAGGCGGGGGCACTCAAGGCCGAGGAGC TCATCGGTTGCTCGGCCGCCTGGGTGCTGACGGGCGACGGGCCGGCGACCAGGCGCGGGGAAACGACTGCCCGGCCGCCT TCACCGGAAAGCAGCGTGTCGGTGCCTCAGTTGGCGAACACCGCGTCCATGGGCACCGGGAGCGAGATGGTCCCTGAAGA TGTCATGGTCGGTCACCTCACGTTGTCGCCGGCATGGATCGGCAGGACGCTGCGCGGCCTGAGCACGCCGGAGAACCTGC GCTTCATCCATGCCTATGGGGACTCCATGGAGCCCACGTTCCTGGATGGCGACGTGCTCCTCGTGGACGCGGGCGTACGC ACCCTGGAGGTGGACGGGATCTATGTGCTGGCGGCCCAGAACCGCCTCTTCATCAAGCGGGTGCGCCAGCGTCTGGACGG GGCCTACGAGATCAGCAGCGACAACCCCACCGTGAAGACGGTGGACGTGCTGGACGGCAAGCACGCGGTAGAGATCCTGG GCAAAGTCATCTGGATCTGGAACGGACGGAAGATCTGA
Upstream 100 bases:
>100_bases GCTGCCGTACCGAACTCGCGTTCATTGATTAAACATCACGTTTACACAAAAGTCCAACTTTTGTTTAAAACAATTTGTTT AATTGGGGCACAATGAAGCC
Downstream 100 bases:
>100_bases CCCTGCGCACGGATTCAAACACCGCGTTGAACCCTTCAGCACGCCGAGCACCGCATCACGACCTGCTCGCCACGTAGTTG CGCAGCCACACCAGCGCCGG
Product: putative phage repressor
Products: NA
Alternate protein names: Peptidase; Transcriptional Regulator; Prophage; Prophage MuSo1 Cro/CI Family Transcriptional Regulator; S24 Family Peptidase; Transcriptional Regulator Cro/CI Family
Number of amino acids: Translated: 225; Mature: 225
Protein sequence:
>225_residues MHESTARLYQAASEIRDVAGQSAVARLLGESPQNLKNWEVRGVSKAGALKAEELIGCSAAWVLTGDGPATRRGETTARPP SPESSVSVPQLANTASMGTGSEMVPEDVMVGHLTLSPAWIGRTLRGLSTPENLRFIHAYGDSMEPTFLDGDVLLVDAGVR TLEVDGIYVLAAQNRLFIKRVRQRLDGAYEISSDNPTVKTVDVLDGKHAVEILGKVIWIWNGRKI
Sequences:
>Translated_225_residues MHESTARLYQAASEIRDVAGQSAVARLLGESPQNLKNWEVRGVSKAGALKAEELIGCSAAWVLTGDGPATRRGETTARPP SPESSVSVPQLANTASMGTGSEMVPEDVMVGHLTLSPAWIGRTLRGLSTPENLRFIHAYGDSMEPTFLDGDVLLVDAGVR TLEVDGIYVLAAQNRLFIKRVRQRLDGAYEISSDNPTVKTVDVLDGKHAVEILGKVIWIWNGRKI >Mature_225_residues MHESTARLYQAASEIRDVAGQSAVARLLGESPQNLKNWEVRGVSKAGALKAEELIGCSAAWVLTGDGPATRRGETTARPP SPESSVSVPQLANTASMGTGSEMVPEDVMVGHLTLSPAWIGRTLRGLSTPENLRFIHAYGDSMEPTFLDGDVLLVDAGVR TLEVDGIYVLAAQNRLFIKRVRQRLDGAYEISSDNPTVKTVDVLDGKHAVEILGKVIWIWNGRKI
Specific function: Unknown
COG id: COG2932
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24303; Mature: 24303
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: PS00501 SPASE_I_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHESTARLYQAASEIRDVAGQSAVARLLGESPQNLKNWEVRGVSKAGALKAEELIGCSAA CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCHHHHHCCEEE WVLTGDGPATRRGETTARPPSPESSVSVPQLANTASMGTGSEMVPEDVMVGHLTLSPAWI EEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCEEEEEEECHHHH GRTLRGLSTPENLRFIHAYGDSMEPTFLDGDVLLVDAGVRTLEVDGIYVLAAQNRLFIKR HHHHHCCCCCCCEEEEEEECCCCCCEEECCCEEEEECCCEEEEECCEEEEEECCHHHHHH VRQRLDGAYEISSDNPTVKTVDVLDGKHAVEILGKVIWIWNGRKI HHHHCCCEEEECCCCCCEEEEEECCCCHHHHHHHEEEEEECCCCC >Mature Secondary Structure MHESTARLYQAASEIRDVAGQSAVARLLGESPQNLKNWEVRGVSKAGALKAEELIGCSAA CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCHHHHHCCEEE WVLTGDGPATRRGETTARPPSPESSVSVPQLANTASMGTGSEMVPEDVMVGHLTLSPAWI EEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCEEEEEEECHHHH GRTLRGLSTPENLRFIHAYGDSMEPTFLDGDVLLVDAGVRTLEVDGIYVLAAQNRLFIKR HHHHHCCCCCCCEEEEEEECCCCCCEEECCCEEEEECCCEEEEECCEEEEEECCHHHHHH VRQRLDGAYEISSDNPTVKTVDVLDGKHAVEILGKVIWIWNGRKI HHHHCCCEEEECCCCCCEEEEEECCCCHHHHHHHEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA