Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

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The map label for this gene is yggV [C]

Identifier: 120612225

GI number: 120612225

Start: 3949880

End: 3950479

Strand: Reverse

Name: yggV [C]

Synonym: Aave_3578

Alternate gene names: 120612225

Gene position: 3950479-3949880 (Counterclockwise)

Preceding gene: 120612226

Following gene: 120612224

Centisome position: 73.8

GC content: 68.17

Gene sequence:

>600_bases
ATGAAACTCGTCCTCGCATCCAACAACCGCGGCAAGCTGGCCGAGCTGCAGAGCATGTTCTCTCCCCTGGGCGTGGAGCT
GGTACGGCAGGCGGATCTCGGCGTGGGCGAGGCGGACGAGCCCTTCCATACCTTCGTGGAGAATGCGCTGGCCAAGGCGC
GTTTCGCCGCGGAGCACACCGGGCTGCCGGCGCTGGCCGACGATGCGGGCCTGTGCGTGGATGCCTTCGGGGGACAGCCG
GGCGTGCAGACGGCTTATTACGCCACCCGTTTCGGCTACGAGAAGGGCGACGCGAACAACGTGCGTGCGTTGCTGGAGCA
GATGCGGGGCGTCGCTTCGCGGCGGGCGGCGATGGTGAGTACGCTCGTGGCCGTGCGCAGTCCCGACGATCCGGAACCTC
TCATCGCCGTGGGCCGGGTGGTCGGAGAGATCGCCACGGAGCCGCGCGGCGACGGGGGCTTCGGCTTCGATCCGGTGATG
TTCATCCCGGAGTTCGGCAAGACGTTCGCCGAGTTGCCCGTGGAGGTGAAGAACGCGCACAGCCACCGGGGGCGGTCCGC
GCAGCAGATGCTCGCGCTCATGCGGGAACGCTGGTTCTGA

Upstream 100 bases:

>100_bases
TGGCCGCCCGGGGCGTGGACGCCCTCATCGCCCTGCAGCGGCAGGCGTTGTCGGCGCCGGCATCCGGCCTGTGAACCCCT
TTCCCGAAAGCATTCCCGCC

Downstream 100 bases:

>100_bases
TCCACCCGGCACCCCGGCCCGAACGCCTTTTCCCCTCCGGCATTTCCCGTCTTCCTCTGCTTTCCATCCCGTGTCCATTC
CCATCGTTCCTGCCGCCACT

Product: putative deoxyribonucleotide triphosphate pyrophosphatase

Products: NA

Alternate protein names: Nucleoside triphosphate phosphohydrolase; NTPase

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MKLVLASNNRGKLAELQSMFSPLGVELVRQADLGVGEADEPFHTFVENALAKARFAAEHTGLPALADDAGLCVDAFGGQP
GVQTAYYATRFGYEKGDANNVRALLEQMRGVASRRAAMVSTLVAVRSPDDPEPLIAVGRVVGEIATEPRGDGGFGFDPVM
FIPEFGKTFAELPVEVKNAHSHRGRSAQQMLALMRERWF

Sequences:

>Translated_199_residues
MKLVLASNNRGKLAELQSMFSPLGVELVRQADLGVGEADEPFHTFVENALAKARFAAEHTGLPALADDAGLCVDAFGGQP
GVQTAYYATRFGYEKGDANNVRALLEQMRGVASRRAAMVSTLVAVRSPDDPEPLIAVGRVVGEIATEPRGDGGFGFDPVM
FIPEFGKTFAELPVEVKNAHSHRGRSAQQMLALMRERWF
>Mature_199_residues
MKLVLASNNRGKLAELQSMFSPLGVELVRQADLGVGEADEPFHTFVENALAKARFAAEHTGLPALADDAGLCVDAFGGQP
GVQTAYYATRFGYEKGDANNVRALLEQMRGVASRRAAMVSTLVAVRSPDDPEPLIAVGRVVGEIATEPRGDGGFGFDPVM
FIPEFGKTFAELPVEVKNAHSHRGRSAQQMLALMRERWF

Specific function: Hydrolyzes non-standard nucleotides such as XTP and dITP/ITP. Might exclude non-standard purines from DNA precursor pool, preventing thus incorporation into DNA and avoiding chromosomal lesions

COG id: COG0127

COG function: function code F; Xanthosine triphosphate pyrophosphatase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAM1 NTPase family

Homologues:

Organism=Escherichia coli, GI1789324, Length=196, Percent_Identity=47.4489795918367, Blast_Score=170, Evalue=5e-44,
Organism=Drosophila melanogaster, GI19920712, Length=198, Percent_Identity=30.3030303030303, Blast_Score=73, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NTPA_ACIAC (A1TT41)

Other databases:

- EMBL:   CP000512
- RefSeq:   YP_971903.1
- ProteinModelPortal:   A1TT41
- SMR:   A1TT41
- STRING:   A1TT41
- GeneID:   4668547
- GenomeReviews:   CP000512_GR
- KEGG:   aav:Aave_3578
- eggNOG:   COG0127
- HOGENOM:   HBG697237
- OMA:   VYTADWA
- PhylomeDB:   A1TT41
- ProtClustDB:   PRK00120
- BioCyc:   AAVE397945:AAVE_3578-MONOMER
- HAMAP:   MF_01405
- InterPro:   IPR002637
- InterPro:   IPR020922
- PANTHER:   PTHR11067
- TIGRFAMs:   TIGR00042

Pfam domain/function: PF01725 Ham1p_like

EC number: =3.6.1.15

Molecular weight: Translated: 21505; Mature: 21505

Theoretical pI: Translated: 5.69; Mature: 5.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLVLASNNRGKLAELQSMFSPLGVELVRQADLGVGEADEPFHTFVENALAKARFAAEHT
CEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHC
GLPALADDAGLCVDAFGGQPGVQTAYYATRFGYEKGDANNVRALLEQMRGVASRRAAMVS
CCCCCCCCCCCEEECCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
TLVAVRSPDDPEPLIAVGRVVGEIATEPRGDGGFGFDPVMFIPEFGKTFAELPVEVKNAH
HHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCHHHHHHHHCCHHHHHCC
SHRGRSAQQMLALMRERWF
CCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MKLVLASNNRGKLAELQSMFSPLGVELVRQADLGVGEADEPFHTFVENALAKARFAAEHT
CEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHC
GLPALADDAGLCVDAFGGQPGVQTAYYATRFGYEKGDANNVRALLEQMRGVASRRAAMVS
CCCCCCCCCCCEEECCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
TLVAVRSPDDPEPLIAVGRVVGEIATEPRGDGGFGFDPVMFIPEFGKTFAELPVEVKNAH
HHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCHHHHHHHHCCHHHHHCC
SHRGRSAQQMLALMRERWF
CCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA