Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612213
Identifier: 120612213
GI number: 120612213
Start: 3938711
End: 3939532
Strand: Direct
Name: 120612213
Synonym: Aave_3566
Alternate gene names: NA
Gene position: 3938711-3939532 (Clockwise)
Preceding gene: 120612212
Following gene: 120612214
Centisome position: 73.58
GC content: 73.24
Gene sequence:
>822_bases ATGGCGGATTTCTTTGGCACAGACGCCTGGCAGGCCGCGCTGGGCGGCCTGGCATGGACCGCCGGCGTGGCCCTGGCCAC CTGGGCCGCCAGCCTGGCACGCCGCGACGCGAGCCTCGTGGACCGGGTCTGGGGCCCCATGATCGCCGGGGCCGGCGTGG TGTATGCCCTGCGGCTGAACCCTGCGTCCGAGGGCGGCGCGGCATGGTGGGCCGTCGGCGTGGCGGCCGCCTGGGCGGCC CGGCTCGCCGTCTTCATCACGCTGCGCAACTGGGGCCACGGCGAGGACCGTCGCTACCAGGCCATGCGGGAGCGCCACGG CGAGCGCTTCGGGCTCAGGAGCCTGTACCTGGTCTTCGGCCTGCAGGCGGTGCTGGCGTGGGTGGTATCCGCCCCTCTTT TCGCCGCGGTGGCGCTTCTTCGTCCGGGGCCTGCCTGGCAGGCCCTGCCCGGCCTGGCCCTGGCCGTTTTCGGCCTGGTG TTCGAGGCCGTGGGGGATGCGCAGATGGCCCGGTTCAAGCGCCGTGGCAGCGGAGCAGACCGCGTGATGGACCAGGGCCT CTGGCGCTACACCCGGCACCCCAACTACTTCGGCGAGGCCTGCGTGTGGTGGGGCCTGTGGCTGGCGGCCCTGGGCCTGG CAGGCATGCCGGCGTTCTGGAGCATCGCCTCGCCCCTGCTCATGACCACGCTGCTCCTGCGGGTCTCGGGGGTGGCGCTG CTCGAAAAGGACATGCCCTCGCGCAGGCCGGCCTATCGCGAATACCAGCGCCGCACGAGCGCCTTCATCCCGATGCCGCC GCGGCCCGGGAGGCCCTCGTGA
Upstream 100 bases:
>100_bases AACTCTTCGCCTACGGCGACGGCCAGCAGTGGTGGGTCAGCCACTACCTGTTCGACAAGCGGCCCGCGCACGGCGCGGCC TGACGGGACGGGAGGCCGGC
Downstream 100 bases:
>100_bases ACGGGCCCGCGCGCTCCCGGCGCCTGCGGGCTGTCGCGCTGGCATCGGCGCTGGGGCCCGGGCTGCTGCTGGCAGCGGCC ACGGCGGGCGCCCATGCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 273; Mature: 272
Protein sequence:
>273_residues MADFFGTDAWQAALGGLAWTAGVALATWAASLARRDASLVDRVWGPMIAGAGVVYALRLNPASEGGAAWWAVGVAAAWAA RLAVFITLRNWGHGEDRRYQAMRERHGERFGLRSLYLVFGLQAVLAWVVSAPLFAAVALLRPGPAWQALPGLALAVFGLV FEAVGDAQMARFKRRGSGADRVMDQGLWRYTRHPNYFGEACVWWGLWLAALGLAGMPAFWSIASPLLMTTLLLRVSGVAL LEKDMPSRRPAYREYQRRTSAFIPMPPRPGRPS
Sequences:
>Translated_273_residues MADFFGTDAWQAALGGLAWTAGVALATWAASLARRDASLVDRVWGPMIAGAGVVYALRLNPASEGGAAWWAVGVAAAWAA RLAVFITLRNWGHGEDRRYQAMRERHGERFGLRSLYLVFGLQAVLAWVVSAPLFAAVALLRPGPAWQALPGLALAVFGLV FEAVGDAQMARFKRRGSGADRVMDQGLWRYTRHPNYFGEACVWWGLWLAALGLAGMPAFWSIASPLLMTTLLLRVSGVAL LEKDMPSRRPAYREYQRRTSAFIPMPPRPGRPS >Mature_272_residues ADFFGTDAWQAALGGLAWTAGVALATWAASLARRDASLVDRVWGPMIAGAGVVYALRLNPASEGGAAWWAVGVAAAWAAR LAVFITLRNWGHGEDRRYQAMRERHGERFGLRSLYLVFGLQAVLAWVVSAPLFAAVALLRPGPAWQALPGLALAVFGLVF EAVGDAQMARFKRRGSGADRVMDQGLWRYTRHPNYFGEACVWWGLWLAALGLAGMPAFWSIASPLLMTTLLLRVSGVALL EKDMPSRRPAYREYQRRTSAFIPMPPRPGRPS
Specific function: Unknown
COG id: COG3752
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Drosophila melanogaster, GI281365853, Length=203, Percent_Identity=30.5418719211823, Blast_Score=96, Evalue=2e-20, Organism=Drosophila melanogaster, GI28574404, Length=203, Percent_Identity=30.5418719211823, Blast_Score=96, Evalue=2e-20, Organism=Drosophila melanogaster, GI21355723, Length=203, Percent_Identity=30.5418719211823, Blast_Score=96, Evalue=2e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29854; Mature: 29723
Theoretical pI: Translated: 11.36; Mature: 11.36
Prosite motif: PS50244 S5A_REDUCTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADFFGTDAWQAALGGLAWTAGVALATWAASLARRDASLVDRVWGPMIAGAGVVYALRLN CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEC PASEGGAAWWAVGVAAAWAARLAVFITLRNWGHGEDRRYQAMRERHGERFGLRSLYLVFG CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH LQAVLAWVVSAPLFAAVALLRPGPAWQALPGLALAVFGLVFEAVGDAQMARFKRRGSGAD HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCHH RVMDQGLWRYTRHPNYFGEACVWWGLWLAALGLAGMPAFWSIASPLLMTTLLLRVSGVAL HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH LEKDMPSRRPAYREYQRRTSAFIPMPPRPGRPS HHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure ADFFGTDAWQAALGGLAWTAGVALATWAASLARRDASLVDRVWGPMIAGAGVVYALRLN CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEC PASEGGAAWWAVGVAAAWAARLAVFITLRNWGHGEDRRYQAMRERHGERFGLRSLYLVFG CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH LQAVLAWVVSAPLFAAVALLRPGPAWQALPGLALAVFGLVFEAVGDAQMARFKRRGSGAD HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCHH RVMDQGLWRYTRHPNYFGEACVWWGLWLAALGLAGMPAFWSIASPLLMTTLLLRVSGVAL HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH LEKDMPSRRPAYREYQRRTSAFIPMPPRPGRPS HHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA